RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, human

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFTN1-210	ENST00000484752	HSP90AA1	P07900	732 aa	Known RBP	13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	RASA1	P20936	1047 aa		13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	AK2	P54819	239 aa		13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	WTAP	Q15007	396 aa		13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	CERKL	Q49MI3	558 aa	Predicted RBP	13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	NFXL1	Q6ZNB6	911 aa		13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	SH3BP5L	Q7L8J4	393 aa		13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	KRT26	Q7Z3Y9	468 aa		13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	SLC44A5	Q8NCS7	719 aa		13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	TTC14	Q96N46	770 aa		13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	TCP11L1	Q9NUJ3	509 aa		13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	ZSWIM5	Q9P217	1185 aa		13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	LIMCH1	Q9UPQ0	1083 aa		13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	ASTN2	O75129	1339 aa	Predicted RBP	13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	TNKS	O95271	1327 aa		13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	PLIN4	Q96Q06	1357 aa		13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	CPA1	P15085	419 aa		13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	LIFR	P42702	1097 aa		13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	IFIT1B	Q5T764	474 aa	Known RBP	13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	TATDN1	Q6P1N9	297 aa		13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	TMEM179	Q6ZVK1	233 aa		13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	CDC37L1	Q7L3B6	337 aa		13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	NEDD1	Q8NHV4	660 aa		13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	BRF1	Q92994	677 aa		13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	TCEANC2	Q96MN5	208 aa		13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	ZNF341	Q9BYN7	854 aa		13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	RRAGC	Q9HB90	399 aa		13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	GINM1	Q9NU53	330 aa		13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	PGAP2	Q9UHJ9	254 aa		13.6	□□□□□ -0.23
RFTN1-210	ENST00000484752	SH2B2	O14492	632 aa	Predicted RBP	13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	PPP1R12B	O60237	982 aa	Predicted RBP	13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	SHMT1	P34896	483 aa		13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	ABCB5	Q2M3G0	1257 aa		13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	FAM47A	Q5JRC9	791 aa		13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	NOL8	Q76FK4	1167 aa	Known RBP	13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	CYB5R4	Q7L1T6	521 aa		13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	CHST3	Q7LGC8	479 aa		13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	LDHD	Q86WU2	507 aa		13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	DGKH	Q86XP1	1220 aa		13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	AGXT2	Q9BYV1	514 aa		13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	INCENP	Q9NQS7	918 aa		13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	SLC12A7	Q9Y666	1083 aa		13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	UTRN	P46939	3433 aa		13.59	□□□□□ -0.23
RFTN1-210	ENST00000484752	DHX16	O60231	1041 aa	Known RBP	13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	CALM1	P0DP23	149 aa		13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	CALM2	P0DP24	149 aa		13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	CALM3	P0DP25	149 aa		13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	ANTXR2	P58335	489 aa		13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	EVX2	Q03828	476 aa		13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	CATIP	Q7Z7H3	387 aa		13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	USP48	Q86UV5	1035 aa		13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	TEPSIN	Q96N21	525 aa		13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	IPO9	Q96P70	1041 aa	Known RBP	13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	LRRC2	Q9BYS8	371 aa		13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	KAT14	Q9H8E8	782 aa		13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	KANSL2	Q9H9L4	492 aa		13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	STX8	Q9UNK0	236 aa		13.58	□□□□□ -0.24
RFTN1-210	ENST00000484752	POTEC	B2RU33	542 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	SMIM22	K7EJ46	135 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	TTLL1	O95922	423 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	ASNS	P08243	561 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	RCAN1	P53805	252 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	MAP3K10	Q02779	954 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	TOB2	Q14106	344 aa	Predicted RBP	13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	MIGA2	Q7L4E1	593 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	SGMS1	Q86VZ5	419 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	IGDCC4	Q8TDY8	1250 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	ZNF526	Q8TF50	670 aa	Predicted RBP	13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	ZNF274	Q96GC6	653 aa	Predicted RBP	13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	ZKSCAN3	Q9BRR0	538 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	TBC1D2	Q9BYX2	928 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	SLK	Q9H2G2	1235 aa	Predicted RBP	13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	SH2D4A	Q9H788	454 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	DNAJC18	Q9H819	358 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	TACC3	Q9Y6A5	838 aa		13.57	□□□□□ -0.24
RFTN1-210	ENST00000484752	KLF18	A0A0U1RQI7	1052 aa		13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	CCDC196	A0A1B0GTZ2	297 aa		13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	FAM196B	A6NMK8	535 aa		13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	GOLGA8B	A8MQT2	603 aa		13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	ADM5	C9JUS6	153 aa		13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	ZBTB43	O43298	467 aa		13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	CTNND1	O60716	968 aa	Known RBP	13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	DDAH1	O94760	285 aa		13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	AKR1B1	P15121	316 aa		13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	IREB2	P48200	963 aa	Known RBP	13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	ICA1	Q05084	483 aa		13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	PPP2R5B	Q15173	497 aa		13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	CPLX2	Q6PUV4	134 aa	Known RBP	13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	ENAH	Q8N8S7	591 aa	Predicted RBP	13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	LY9	Q9HBG7	655 aa		13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	PICK1	Q9NRD5	415 aa		13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	SCAF8	Q9UPN6	1271 aa	Known RBP	13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.56	□□□□□ -0.24
RFTN1-210	ENST00000484752	GDF11	O95390	407 aa		13.55	□□□□□ -0.24
RFTN1-210	ENST00000484752	TOP1	P11387	765 aa	Known RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms