RNA–Protein interactions for RNA: ENST00000484683.1

RPRD1B-205, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-205ENST00000484683 SWAP70Q9UH65 585 aa11.14□□□□□ -0.63
RPRD1B-205ENST00000484683 ZBTB21Q9ULJ3 1066 aa11.14□□□□□ -0.63
RPRD1B-205ENST00000484683 HPS5Q9UPZ3 1129 aa11.14□□□□□ -0.63
RPRD1B-205ENST00000484683 MPHOSPH10O00566 681 aaKnown RBP11.13□□□□□ -0.63
RPRD1B-205ENST00000484683 FMNL1O95466 1100 aaPredicted RBP11.13□□□□□ -0.63
RPRD1B-205ENST00000484683 GH2P01242 217 aa11.13□□□□□ -0.63
RPRD1B-205ENST00000484683 APPP05067 770 aa11.13□□□□□ -0.63
RPRD1B-205ENST00000484683 SLURP2P0DP57 97 aa11.13□□□□□ -0.63
RPRD1B-205ENST00000484683 HMGCS2P54868 508 aa11.13□□□□□ -0.63
RPRD1B-205ENST00000484683 FCGRTP55899 365 aa11.13□□□□□ -0.63
RPRD1B-205ENST00000484683 BACE1P56817 501 aa11.13□□□□□ -0.63
RPRD1B-205ENST00000484683 IRX3P78415 501 aaPredicted RBP11.13□□□□□ -0.63
RPRD1B-205ENST00000484683 LACTBP83111 547 aaPredicted RBP11.13□□□□□ -0.63
RPRD1B-205ENST00000484683 TATDN1Q6P1N9 297 aa11.13□□□□□ -0.63
RPRD1B-205ENST00000484683 OTOP1Q7RTM1 612 aa11.13□□□□□ -0.63
RPRD1B-205ENST00000484683 CPA4Q9UI42 421 aa11.13□□□□□ -0.63
RPRD1B-205ENST00000484683 CYP2C8P10632 490 aa11.12□□□□□ -0.63
RPRD1B-205ENST00000484683 GCLCP48506 637 aaPredicted RBP11.12□□□□□ -0.63
RPRD1B-205ENST00000484683 PLCD1P51178 756 aa11.12□□□□□ -0.63
RPRD1B-205ENST00000484683 MTMR2Q13614 643 aa11.12□□□□□ -0.63
RPRD1B-205ENST00000484683 TSHZ3Q63HK5 1081 aa11.12□□□□□ -0.63
RPRD1B-205ENST00000484683 USP17L2Q6R6M4 530 aa11.12□□□□□ -0.63
RPRD1B-205ENST00000484683 C17orf99Q6UX52 265 aa11.12□□□□□ -0.63
RPRD1B-205ENST00000484683 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
RPRD1B-205ENST00000484683 EVI5LQ96CN4 794 aa11.12□□□□□ -0.63
RPRD1B-205ENST00000484683 CCDC17Q96LX7 622 aa11.12□□□□□ -0.63
RPRD1B-205ENST00000484683 SH2D4AQ9H788 454 aa11.12□□□□□ -0.63
RPRD1B-205ENST00000484683 ARPP21Q9UBL0 812 aaPredicted RBP11.12□□□□□ -0.63
RPRD1B-205ENST00000484683 PTPN22Q9Y2R2 807 aa11.12□□□□□ -0.63
RPRD1B-205ENST00000484683 MAST2Q6P0Q8 1798 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 USP17L12C9JPN9 530 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 USP17L21D6R901 530 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 SLC3A2P08195 630 aaKnown RBP11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 PSMC4P43686 418 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 TDO2P48775 406 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 SLC9C1Q4G0N8 1177 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 SH3D19Q5HYK7 790 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 B4GALNT3Q6L9W6 998 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 GPAT2Q6NUI2 795 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 GIMAP6Q6P9H5 292 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 CCDC84Q86UT8 332 aaPredicted RBP11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 EXOC6Q8TAG9 804 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 RAET1EQ8TD07 263 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 GTF3C2Q8WUA4 911 aaPredicted RBP11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 TMEM106CQ9BVX2 250 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 PUS7LQ9H0K6 701 aaKnown RBP11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 DNAJC18Q9H819 358 aa11.11□□□□□ -0.63
RPRD1B-205ENST00000484683 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
RPRD1B-205ENST00000484683 PRKAB2O43741 272 aa11.1□□□□□ -0.63
RPRD1B-205ENST00000484683 MOGSQ13724 837 aa11.1□□□□□ -0.63
RPRD1B-205ENST00000484683 TMEM179Q6ZVK1 233 aa11.1□□□□□ -0.63
RPRD1B-205ENST00000484683 TICAM2Q86XR7 235 aa11.1□□□□□ -0.63
RPRD1B-205ENST00000484683 COA7Q96BR5 231 aa11.1□□□□□ -0.63
RPRD1B-205ENST00000484683 STRBPQ96SI9 672 aaKnown RBP11.1□□□□□ -0.63
RPRD1B-205ENST00000484683 LNPKQ9C0E8 428 aa11.1□□□□□ -0.63
RPRD1B-205ENST00000484683 MKNK2Q9HBH9 465 aa11.1□□□□□ -0.63
RPRD1B-205ENST00000484683 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.1□□□□□ -0.63
RPRD1B-205ENST00000484683 DOCK2Q92608 1830 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 OTOFQ9HC10 1997 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 MINDY4BA8MYZ0 360 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 TNPO2O14787 897 aaKnown RBP11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 GPAA1O43292 621 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 ECM2O94769 699 aaPredicted RBP11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 HOXA7P31268 230 aaPredicted RBP11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 PDE1AP54750 535 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 MLLT1Q03111 559 aaPredicted RBP11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 GABPAQ06546 454 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 RRP1BQ14684 758 aaKnown RBP11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 FAM110CQ1W6H9 321 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 TREML2Q5T2D2 321 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 C12orf60Q5U649 245 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 CHD1LQ86WJ1 897 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 SMC5Q8IY18 1101 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 ANKRD13CQ8N6S4 541 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 PI4K2BQ8TCG2 481 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 ARHGEF10LQ9HCE6 1279 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 CWC22Q9HCG8 908 aaKnown RBP11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 STAP2Q9UGK3 403 aa11.09□□□□□ -0.63
RPRD1B-205ENST00000484683 USP17L15C9J2P7 530 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 PATL2C9JE40 543 aaKnown RBP11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 USP17L13C9JLJ4 530 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 USP17L11C9JVI0 530 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 USP17L18D6R9N7 530 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 USP17L22D6RA61 530 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 USP17L17D6RBQ6 530 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 USP17L19D6RCP7 530 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 USP17L20D6RJB6 530 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 BCRP11274 1271 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 SHMT1P34896 483 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 CDK8P49336 464 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 USP17L24Q0WX57 530 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 ZYXQ15942 572 aaKnown RBP11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 SLFNL1Q499Z3 407 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 CTR9Q6PD62 1173 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 ZNF444Q8N0Y2 327 aaPredicted RBP11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 OTUD7AQ8TE49 926 aaPredicted RBP11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 OSBP2Q969R2 916 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 RILPL2Q969X0 211 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 TRIM47Q96LD4 638 aa11.08□□□□□ -0.64
RPRD1B-205ENST00000484683 KIAA1683Q9H0B3 1180 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms