RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 MAPK8IP2Q13387 824 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP2-217ENST00000484546 TTC22Q5TAA0 569 aa14.03□□□□□ -0.16
CDK5RAP2-217ENST00000484546 SEC62Q99442 399 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP2-217ENST00000484546 R3HDMLQ9H3Y0 253 aa14.03□□□□□ -0.16
CDK5RAP2-217ENST00000484546 SWAP70Q9UH65 585 aa14.03□□□□□ -0.16
CDK5RAP2-217ENST00000484546 BAZ2AQ9UIF9 1905 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP2-217ENST00000484546 TRIM75PA6NK02 468 aa14.02□□□□□ -0.17
CDK5RAP2-217ENST00000484546 USP17L5A8MUK1 530 aa14.02□□□□□ -0.17
CDK5RAP2-217ENST00000484546 MINDY4BA8MYZ0 360 aa14.02□□□□□ -0.17
CDK5RAP2-217ENST00000484546 MPHOSPH10O00566 681 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP2-217ENST00000484546 GDF11O95390 407 aa14.02□□□□□ -0.17
CDK5RAP2-217ENST00000484546 CERKLQ49MI3 558 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP2-217ENST00000484546 MCMDC2Q4G0Z9 681 aa14.02□□□□□ -0.17
CDK5RAP2-217ENST00000484546 GIMAP6Q6P9H5 292 aa14.02□□□□□ -0.17
CDK5RAP2-217ENST00000484546 CCDC84Q86UT8 332 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP2-217ENST00000484546 TNS4Q8IZW8 715 aa14.02□□□□□ -0.17
CDK5RAP2-217ENST00000484546 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.17
CDK5RAP2-217ENST00000484546 NAPBQ9H115 298 aa14.02□□□□□ -0.17
CDK5RAP2-217ENST00000484546 GINM1Q9NU53 330 aa14.02□□□□□ -0.17
CDK5RAP2-217ENST00000484546 PATL2C9JE40 543 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 BTBD19C9JJ37 291 aa14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 CXCL11O14625 94 aa14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 SLC3A2P08195 630 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 CYP2D6P10635 497 aa14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 SDSP20132 328 aa14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 NMIQ13287 307 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 CRHR2Q13324 411 aa14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 ABCB5Q2M3G0 1257 aa14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 NOM1Q5C9Z4 860 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 GADL1Q6ZQY3 521 aa14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 FASTKD5Q7L8L6 764 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 ZNF287Q9HBT7 754 aa14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 TAOK2Q9UL54 1235 aa14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 ZBTB21Q9ULJ3 1066 aa14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 LOC285556D6RIA3 1793 aa14.01□□□□□ -0.17
CDK5RAP2-217ENST00000484546 GSG1L2A8MUP6 293 aa14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 GPR25O00155 361 aa14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 EVX2Q03828 476 aa14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 MOGSQ13724 837 aa14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 RAB3GAP1Q15042 981 aa14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 SHROOM1Q2M3G4 852 aaPredicted RBP14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 C12orf60Q5U649 245 aa14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 ERICH6BQ5W0A0 696 aa14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 CTR9Q6PD62 1173 aa14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 CWC27Q6UX04 472 aaKnown RBP14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 CCDC129Q6ZRS4 1044 aa14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 ZNF280CQ8ND82 737 aa14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 ZNF296Q8WUU4 475 aaPredicted RBP14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 FAM227BQ96M60 508 aa14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 FEZ1Q99689 392 aa14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 ZCCHC17Q9NP64 241 aaKnown RBP14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 AFG3L2Q9Y4W6 797 aa14□□□□□ -0.17
CDK5RAP2-217ENST00000484546 CCDC171Q6TFL3 1326 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 CYP2D7A0A087X1C5 515 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 A0A0D9SFI3 127 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 A0A0G2JLL6 359 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 GH2P01242 217 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 JAG1P78504 1218 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 GABPAQ06546 454 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 SPP2Q13103 211 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 TAF1CQ15572 869 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 TATDN1Q6P1N9 297 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 PRRT2Q7Z6L0 340 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 ANKRD23Q86SG2 305 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 IFNL3Q8IZI9 196 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 STK11IPQ8N1F8 1099 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 DYNLL2Q96FJ2 89 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 MKNK2Q9HBH9 465 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 ZFYVE28Q9HCC9 887 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 TMOD4Q9NZQ9 345 aa13.99□□□□□ -0.17
CDK5RAP2-217ENST00000484546 MYH8P13535 1937 aa13.98□□□□□ -0.17
CDK5RAP2-217ENST00000484546 GSPT1P15170 499 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP2-217ENST00000484546 SHMT1P34896 483 aa13.98□□□□□ -0.17
CDK5RAP2-217ENST00000484546 SBK1Q52WX2 424 aa13.98□□□□□ -0.17
CDK5RAP2-217ENST00000484546 C16orf86Q6ZW13 317 aa13.98□□□□□ -0.17
CDK5RAP2-217ENST00000484546 SLC44A5Q8NCS7 719 aa13.98□□□□□ -0.17
CDK5RAP2-217ENST00000484546 RUFY2Q8WXA3 655 aa13.98□□□□□ -0.17
CDK5RAP2-217ENST00000484546 CCDC17Q96LX7 622 aa13.98□□□□□ -0.17
CDK5RAP2-217ENST00000484546 EPB41L4AQ9HCS5 686 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP2-217ENST00000484546 PPP4R2Q9NY27 417 aa13.98□□□□□ -0.17
CDK5RAP2-217ENST00000484546 FKTNO75072 461 aa13.97□□□□□ -0.17
CDK5RAP2-217ENST00000484546 CDK8P49336 464 aa13.97□□□□□ -0.17
CDK5RAP2-217ENST00000484546 PDE4BQ07343 736 aa13.97□□□□□ -0.17
CDK5RAP2-217ENST00000484546 PABPC4Q13310 644 aaKnown RBP eCLIP13.97□□□□□ -0.175e-6■□□□□ 10.8
CDK5RAP2-217ENST00000484546 MTMR2Q13614 643 aa13.97□□□□□ -0.17
CDK5RAP2-217ENST00000484546 GPAT2Q6NUI2 795 aa13.97□□□□□ -0.17
CDK5RAP2-217ENST00000484546 TMEM179Q6ZVK1 233 aa13.97□□□□□ -0.17
CDK5RAP2-217ENST00000484546 USP17L10C9JJH3 530 aa13.96□□□□□ -0.17
CDK5RAP2-217ENST00000484546 PDHXO00330 501 aa13.96□□□□□ -0.17
CDK5RAP2-217ENST00000484546 HMGCS2P54868 508 aa13.96□□□□□ -0.17
CDK5RAP2-217ENST00000484546 PPARAQ07869 468 aa13.96□□□□□ -0.17
CDK5RAP2-217ENST00000484546 ZNF444Q8N0Y2 327 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP2-217ENST00000484546 PARK7Q99497 189 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP2-217ENST00000484546 WDR18Q9BV38 432 aa13.96□□□□□ -0.17
CDK5RAP2-217ENST00000484546 ADGRA2Q96PE1 1338 aa13.95□□□□□ -0.18
CDK5RAP2-217ENST00000484546 C19orf81C9J6K1 198 aa13.95□□□□□ -0.18
CDK5RAP2-217ENST00000484546 SMIM22K7EJ46 135 aa13.95□□□□□ -0.18
CDK5RAP2-217ENST00000484546 USP14P54578 494 aa13.95□□□□□ -0.18
CDK5RAP2-217ENST00000484546 BACE1P56817 501 aa13.95□□□□□ -0.18
CDK5RAP2-217ENST00000484546 DGKZQ13574 1117 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms