RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 CPDO75976 1380 aa13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 PIP4K2AP48426 406 aaPredicted RBP13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 IRX1P78414 480 aaPredicted RBP13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 MYL5Q02045 173 aa13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 PREPLQ4J6C6 727 aaPredicted RBP13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 ABCC12Q96J65 1359 aa13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 ORAI2Q96SN7 254 aa13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 DESI2Q9BSY9 194 aa13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 TRIM6Q9C030 488 aaPredicted RBP13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 MYH7P12883 1935 aa13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 CDHR2Q9BYE9 1310 aa13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 FRMD3A2A2Y4 597 aa13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 FNTAP49354 379 aa13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 CCNHP51946 323 aaPredicted RBP13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 CWC25Q9NXE8 425 aaPredicted RBP13.11□□□□□ -0.31
SEC61A1-205ENST00000483956 TMEM232C9JQI7 657 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 CPLX1O14810 134 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 CHUKO15111 745 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 SYKP43405 635 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 ANTXR2P58335 489 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 ANKLE2Q86XL3 938 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 FMNL3Q8IVF7 1028 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 VSTM4Q8IW00 320 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 RBM33Q96EV2 1170 aaKnown RBP13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 COL18A1P39060 1754 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 GOLGA6L9A6NEM1 432 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 SHOX2O60902 331 aaPredicted RBP13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 ERCC3P19447 782 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 IRAK1P51617 712 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 NCOA7Q8NI08 942 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 BORCS6Q96GS4 357 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 SAMM50Q9Y512 469 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 FGAP02671 866 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 UBASH3AP57075 661 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 BCAS4Q8TDM0 211 aa13.1□□□□□ -0.31
SEC61A1-205ENST00000483956 ECM29Q5VYK3 1845 aa13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 CFAP100Q494V2 611 aa13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 LRRC24Q50LG9 513 aa13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 IQCA1Q86XH1 822 aa13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 KIRREL3Q8IZU9 778 aa13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 CEP112Q8N8E3 955 aa13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 BAG1Q99933 345 aaPredicted RBP13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 ZMYM6O95789 1325 aa13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 TOP1P11387 765 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 ELOA2Q8IYF1 753 aaPredicted RBP13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 GBP3Q9H0R5 595 aa13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 MRPL44Q9H9J2 332 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 NLRP2Q9NX02 1062 aa13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 CDC23Q9UJX2 597 aa13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 UBR2Q8IWV8 1755 aa13.09□□□□□ -0.31
SEC61A1-205ENST00000483956 MAP3K15Q6ZN16 1313 aa13.08□□□□□ -0.31
SEC61A1-205ENST00000483956 SERPINC1P01008 464 aa13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 AARSP49588 968 aaKnown RBP eCLIP13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 ACTN3Q08043 901 aaPredicted RBP13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 CRYMQ14894 314 aa13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 PTPAQ15257 358 aa13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 RESP18Q5W5W9 173 aa13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 LMOD2Q6P5Q4 547 aa13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 RALYLQ86SE5 291 aaKnown RBP13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 APPBP2Q92624 585 aa13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 XAGE2Q96GT9 111 aa13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 MPHOSPH10O00566 681 aaKnown RBP13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 CYP27B1O15528 508 aa13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 HAND2P61296 217 aa13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 SHC4Q6S5L8 630 aa13.08□□□□□ -0.32
SEC61A1-205ENST00000483956 EME2A4GXA9 379 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 RTN2O75298 545 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 SKAP2O75563 359 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 CDKL5O76039 1030 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 SSR1P43307 286 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 KRT28Q7Z3Y7 464 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 VPS37DQ86XT2 251 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 NBPF15Q8N660 670 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 PDILTQ8N807 584 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 LZTFL1Q9NQ48 299 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 GJB4Q9NTQ9 266 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 ZNF483Q8TF39 744 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 MAP3K14Q99558 947 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 A0A0U1RQJ8 604 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 SHTN1A0MZ66 631 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 MARCKSP29966 332 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 MRPL12P52815 198 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 TBX2Q13207 712 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 AMOTL1Q8IY63 956 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 ATRIPQ8WXE1 791 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 C19orf44Q9H6X5 657 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 CEP126Q9P2H0 1117 aa13.07□□□□□ -0.32
SEC61A1-205ENST00000483956 ATRNO75882 1429 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 CLNS1AP54105 237 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 FKBP4Q02790 459 aaKnown RBP eCLIP13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 GRIK3Q13003 919 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 MTF1Q14872 753 aa13.06□□□□□ -0.32
SEC61A1-205ENST00000483956 WASHC4Q2M389 1173 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms