RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 A0A1B0GUL7 405 aa13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 MAPK4P31152 587 aa13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 RGS2P41220 211 aa13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 ERVK-9P63128 1117 aa13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 ERVK-24P63145 666 aa13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 PDE3AQ14432 1141 aa13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 GPR142Q7Z601 462 aa13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 TRMT44Q8IYL2 757 aaKnown RBP13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 SH3RF3Q8TEJ3 882 aaPredicted RBP13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 CDX2Q99626 313 aaPredicted RBP13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 LBHD1Q9BQE6 289 aaPredicted RBP13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 PAGR1Q9BTK6 254 aa13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 DNAJC18Q9H819 358 aa13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 COPRSQ9NQ92 184 aa13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 TMOD4Q9NZQ9 345 aa13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 HERC5Q9UII4 1024 aaKnown RBP13.47□□□□□ -0.25
SMARCC1-205ENST00000483847 CDH23Q9H251 3354 aa13.46□□□□□ -0.25
SMARCC1-205ENST00000483847 ATN1P54259 1190 aaPredicted RBP13.46□□□□□ -0.25
SMARCC1-205ENST00000483847 TFCP2Q12800 502 aa13.46□□□□□ -0.25
SMARCC1-205ENST00000483847 ZNF697Q5TEC3 545 aa13.46□□□□□ -0.25
SMARCC1-205ENST00000483847 PLEKHH3Q7Z736 793 aa13.46□□□□□ -0.25
SMARCC1-205ENST00000483847 TEX11Q8IYF3 940 aa13.46□□□□□ -0.25
SMARCC1-205ENST00000483847 APBA2Q99767 749 aa13.46□□□□□ -0.25
SMARCC1-205ENST00000483847 FLRT1Q9NZU1 646 aa13.46□□□□□ -0.25
SMARCC1-205ENST00000483847 NDUFB9Q9Y6M9 179 aa13.46□□□□□ -0.25
SMARCC1-205ENST00000483847 CDK5RAP2Q96SN8 1893 aa13.45□□□□□ -0.26
SMARCC1-205ENST00000483847 GDF11O95390 407 aa13.45□□□□□ -0.26
SMARCC1-205ENST00000483847 MAP4K4O95819 1239 aaPredicted RBP13.45□□□□□ -0.26
SMARCC1-205ENST00000483847 LDHCP07864 332 aa13.45□□□□□ -0.26
SMARCC1-205ENST00000483847 ASNSP08243 561 aa13.45□□□□□ -0.26
SMARCC1-205ENST00000483847 GSTO1P78417 241 aa13.45□□□□□ -0.26
SMARCC1-205ENST00000483847 CCAR1Q8IX12 1150 aaKnown RBP13.45□□□□□ -0.26
SMARCC1-205ENST00000483847 FAM9BQ8IZU0 186 aa13.45□□□□□ -0.26
SMARCC1-205ENST00000483847 SPATA5Q8NB90 893 aa13.45□□□□□ -0.26
SMARCC1-205ENST00000483847 MAFAQ8NHW3 353 aaPredicted RBP13.45□□□□□ -0.26
SMARCC1-205ENST00000483847 EMILIN3Q9NT22 766 aa13.45□□□□□ -0.26
SMARCC1-205ENST00000483847 RAI14Q9P0K7 980 aa13.45□□□□□ -0.26
SMARCC1-205ENST00000483847 USP17L10C9JJH3 530 aa13.44□□□□□ -0.26
SMARCC1-205ENST00000483847 MAP2K5Q13163 448 aa13.44□□□□□ -0.26
SMARCC1-205ENST00000483847 MVPQ14764 893 aaKnown RBP13.44□□□□□ -0.26
SMARCC1-205ENST00000483847 SHHQ15465 462 aa13.44□□□□□ -0.26
SMARCC1-205ENST00000483847 C9orf50Q5SZB4 431 aa13.44□□□□□ -0.26
SMARCC1-205ENST00000483847 NEUROD6Q96NK8 337 aa13.44□□□□□ -0.26
SMARCC1-205ENST00000483847 SEMA6BQ9H3T3 888 aa13.44□□□□□ -0.26
SMARCC1-205ENST00000483847 PRDM6Q9NQX0 595 aa13.44□□□□□ -0.26
SMARCC1-205ENST00000483847 PI4KBQ9UBF8 816 aa13.44□□□□□ -0.26
SMARCC1-205ENST00000483847 C19orf81C9J6K1 198 aa13.43□□□□□ -0.26
SMARCC1-205ENST00000483847 CNMDO75829 334 aa13.43□□□□□ -0.26
SMARCC1-205ENST00000483847 RTP1P59025 263 aa13.43□□□□□ -0.26
SMARCC1-205ENST00000483847 MAPKAPK5Q8IW41 473 aa13.43□□□□□ -0.26
SMARCC1-205ENST00000483847 TRPV1Q8NER1 839 aa13.43□□□□□ -0.26
SMARCC1-205ENST00000483847 MYLIPQ8WY64 445 aa13.43□□□□□ -0.26
SMARCC1-205ENST00000483847 EDC3Q96F86 508 aaKnown RBP13.43□□□□□ -0.26
SMARCC1-205ENST00000483847 TTYH1Q9H313 450 aaPredicted RBP13.43□□□□□ -0.26
SMARCC1-205ENST00000483847 DDX20Q9UHI6 824 aaKnown RBP13.43□□□□□ -0.26
SMARCC1-205ENST00000483847 ZBTB21Q9ULJ3 1066 aa13.43□□□□□ -0.26
SMARCC1-205ENST00000483847 CNGA1P29973 690 aa13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 CYP2C19P33261 490 aa13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 MFSD14CQ5VZR4 134 aa13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 ADGRA1Q86SQ6 560 aa13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 METTL16Q86W50 562 aaKnown RBP13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 TGFBRAP1Q8WUH2 860 aa13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 LPAR1Q92633 364 aa13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 MEIS3Q99687 375 aa13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 DHX36Q9H2U1 1008 aaKnown RBP13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 CWC22Q9HCG8 908 aaKnown RBP13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 SMC4Q9NTJ3 1288 aa13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 AATFQ9NY61 560 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 PALD1Q9ULE6 856 aa13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 AKAP2Q9Y2D5 859 aa13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 ATP11BQ9Y2G3 1177 aa13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 RLFQ13129 1914 aa13.42□□□□□ -0.26
SMARCC1-205ENST00000483847 FLT1P17948 1338 aa13.41□□□□□ -0.26
SMARCC1-205ENST00000483847 FOCADQ5VW36 1801 aa13.41□□□□□ -0.26
SMARCC1-205ENST00000483847 DNM1LO00429 736 aa13.41□□□□□ -0.26
SMARCC1-205ENST00000483847 ARID4AP29374 1257 aaPredicted RBP13.41□□□□□ -0.26
SMARCC1-205ENST00000483847 MCAMP43121 646 aa13.41□□□□□ -0.26
SMARCC1-205ENST00000483847 ZYXQ15942 572 aaKnown RBP13.41□□□□□ -0.26
SMARCC1-205ENST00000483847 GJC2Q5T442 439 aaPredicted RBP13.41□□□□□ -0.26
SMARCC1-205ENST00000483847 CRACR2BQ8N4Y2 399 aaPredicted RBP13.41□□□□□ -0.26
SMARCC1-205ENST00000483847 LRP2BPQ9P2M1 347 aa13.41□□□□□ -0.26
SMARCC1-205ENST00000483847 PRKAG2Q9UGJ0 569 aa13.41□□□□□ -0.26
SMARCC1-205ENST00000483847 MUC3AQ02505 3323 aa13.4□□□□□ -0.26
SMARCC1-205ENST00000483847 PTPREP23469 700 aa13.4□□□□□ -0.26
SMARCC1-205ENST00000483847 ALDH1L2Q3SY69 923 aa13.4□□□□□ -0.26
SMARCC1-205ENST00000483847 GORABQ5T7V8 394 aa13.4□□□□□ -0.26
SMARCC1-205ENST00000483847 WDR78Q5VTH9 848 aa13.4□□□□□ -0.26
SMARCC1-205ENST00000483847 USP17L2Q6R6M4 530 aa13.4□□□□□ -0.26
SMARCC1-205ENST00000483847 FOXP4Q8IVH2 680 aaPredicted RBP13.4□□□□□ -0.26
SMARCC1-205ENST00000483847 NPLOC4Q8TAT6 608 aa13.4□□□□□ -0.26
SMARCC1-205ENST00000483847 GTF3C2Q8WUA4 911 aaPredicted RBP13.4□□□□□ -0.26
SMARCC1-205ENST00000483847 BADQ92934 168 aa13.4□□□□□ -0.26
SMARCC1-205ENST00000483847 PRDM5Q9NQX1 630 aaPredicted RBP13.4□□□□□ -0.26
SMARCC1-205ENST00000483847 SAP30BPQ9UHR5 308 aaKnown RBP13.4□□□□□ -0.26
SMARCC1-205ENST00000483847 RABGAP1Q9Y3P9 1069 aa13.4□□□□□ -0.26
SMARCC1-205ENST00000483847 SLC15A5A6NIM6 579 aa13.39□□□□□ -0.27
SMARCC1-205ENST00000483847 SRGAP3O43295 1099 aa13.39□□□□□ -0.27
SMARCC1-205ENST00000483847 GH2P01242 217 aa13.39□□□□□ -0.27
SMARCC1-205ENST00000483847 IGHA2P01877 340 aa13.39□□□□□ -0.27
SMARCC1-205ENST00000483847 HOXC6P09630 235 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms