RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 TESPA1A2RU30 521 aaPredicted RBP10.5□□□□□ -0.73
SNX4-205ENST00000482965 GSG1L2A8MUP6 293 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 PATL2C9JE40 543 aaKnown RBP10.5□□□□□ -0.73
SNX4-205ENST00000482965 ALDH1A1P00352 501 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 ASNSP08243 561 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 CETPP11597 493 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 SDSP20132 328 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 TDO2P48775 406 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 LBX1P52954 281 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 EVX2Q03828 476 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 NMIQ13287 307 aaPredicted RBP10.5□□□□□ -0.73
SNX4-205ENST00000482965 C12orf60Q5U649 245 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 GIMAP6Q6P9H5 292 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 CCDC129Q6ZRS4 1044 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 CCDC84Q86UT8 332 aaPredicted RBP10.5□□□□□ -0.73
SNX4-205ENST00000482965 IFNL1Q8IU54 200 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 BRI3BPQ8WY22 251 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 MS4A4AQ96JQ5 239 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 FAM227BQ96M60 508 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 NACAP1Q9BZK3 213 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 DIAPH3Q9NSV4 1193 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 GINM1Q9NU53 330 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.5□□□□□ -0.73
SNX4-205ENST00000482965 ARPP21Q9UBL0 812 aaPredicted RBP10.5□□□□□ -0.73
SNX4-205ENST00000482965 KCNH4Q9UQ05 1017 aa10.5□□□□□ -0.73
SNX4-205ENST00000482965 A0A0D9SFI3 127 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 USP17L5A8MUK1 530 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 MINDY4BA8MYZ0 360 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 HIP1O00291 1037 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 IGF2BP3O00425 579 aaKnown RBP eCLIP10.49□□□□□ -0.73
SNX4-205ENST00000482965 CXCL11O14625 94 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 GSPT1P15170 499 aaKnown RBP10.49□□□□□ -0.73
SNX4-205ENST00000482965 SHMT1P34896 483 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 GABPAQ06546 454 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 CERKLQ49MI3 558 aaPredicted RBP10.49□□□□□ -0.73
SNX4-205ENST00000482965 MCMDC2Q4G0Z9 681 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 TATDN1Q6P1N9 297 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 CTR9Q6PD62 1173 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 IFNL3Q8IZI9 196 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 SLC44A5Q8NCS7 719 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 DYNLL2Q96FJ2 89 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 TBC1D2Q9BYX2 928 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 NAPBQ9H115 298 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 AS3MTQ9HBK9 375 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 EPB41L4AQ9HCS5 686 aaPredicted RBP10.49□□□□□ -0.73
SNX4-205ENST00000482965 CABP5Q9NP86 173 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 SWAP70Q9UH65 585 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 ZBTB21Q9ULJ3 1066 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 AFG3L2Q9Y4W6 797 aa10.49□□□□□ -0.73
SNX4-205ENST00000482965 TRIM75PA6NK02 468 aa10.48□□□□□ -0.73
SNX4-205ENST00000482965 TBC1D8O95759 1140 aa10.48□□□□□ -0.73
SNX4-205ENST00000482965 GH2P01242 217 aa10.48□□□□□ -0.73
SNX4-205ENST00000482965 JAG1P78504 1218 aa10.48□□□□□ -0.73
SNX4-205ENST00000482965 ABCB5Q2M3G0 1257 aa10.48□□□□□ -0.73
SNX4-205ENST00000482965 SHROOM1Q2M3G4 852 aaPredicted RBP10.48□□□□□ -0.73
SNX4-205ENST00000482965 SBK1Q52WX2 424 aa10.48□□□□□ -0.73
SNX4-205ENST00000482965 ERICH6BQ5W0A0 696 aa10.48□□□□□ -0.73
SNX4-205ENST00000482965 GADL1Q6ZQY3 521 aa10.48□□□□□ -0.73
SNX4-205ENST00000482965 ZNF280CQ8ND82 737 aa10.48□□□□□ -0.73
SNX4-205ENST00000482965 PTPN18Q99952 460 aa10.48□□□□□ -0.73
SNX4-205ENST00000482965 CCDC171Q6TFL3 1326 aa10.48□□□□□ -0.73
SNX4-205ENST00000482965 A0A0G2JLL6 359 aaPredicted RBP10.47□□□□□ -0.73
SNX4-205ENST00000482965 BTBD19C9JJ37 291 aa10.47□□□□□ -0.73
SNX4-205ENST00000482965 SMIM22K7EJ46 135 aa10.47□□□□□ -0.73
SNX4-205ENST00000482965 MPHOSPH10O00566 681 aaKnown RBP10.47□□□□□ -0.73
SNX4-205ENST00000482965 CDK8P49336 464 aa10.47□□□□□ -0.73
SNX4-205ENST00000482965 MFAP1P55081 439 aaKnown RBP10.47□□□□□ -0.73
SNX4-205ENST00000482965 SPP2Q13103 211 aa10.47□□□□□ -0.73
SNX4-205ENST00000482965 RAB3GAP1Q15042 981 aa10.47□□□□□ -0.73
SNX4-205ENST00000482965 TAF1CQ15572 869 aaPredicted RBP10.47□□□□□ -0.73
SNX4-205ENST00000482965 CWC27Q6UX04 472 aaKnown RBP10.47□□□□□ -0.73
SNX4-205ENST00000482965 C16orf86Q6ZW13 317 aa10.47□□□□□ -0.73
SNX4-205ENST00000482965 FASTKD5Q7L8L6 764 aaKnown RBP10.47□□□□□ -0.73
SNX4-205ENST00000482965 PRRT2Q7Z6L0 340 aaPredicted RBP10.47□□□□□ -0.73
SNX4-205ENST00000482965 ZNF589Q86UQ0 364 aaPredicted RBP10.47□□□□□ -0.73
SNX4-205ENST00000482965 STK11IPQ8N1F8 1099 aa10.47□□□□□ -0.73
SNX4-205ENST00000482965 FAM43AQ8N2R8 423 aa10.47□□□□□ -0.73
SNX4-205ENST00000482965 PRDM10Q9NQV6 1147 aa10.47□□□□□ -0.73
SNX4-205ENST00000482965 PPP4R2Q9NY27 417 aa10.47□□□□□ -0.73
SNX4-205ENST00000482965 LOC285556D6RIA3 1793 aa10.47□□□□□ -0.73
SNX4-205ENST00000482965 SLC3A2P08195 630 aaKnown RBP10.46□□□□□ -0.73
SNX4-205ENST00000482965 CRHR2Q13324 411 aa10.46□□□□□ -0.73
SNX4-205ENST00000482965 VPS53Q5VIR6 699 aa10.46□□□□□ -0.73
SNX4-205ENST00000482965 ANKRD23Q86SG2 305 aa10.46□□□□□ -0.73
SNX4-205ENST00000482965 SKAP1Q86WV1 359 aa10.46□□□□□ -0.73
SNX4-205ENST00000482965 CCDC17Q96LX7 622 aa10.46□□□□□ -0.73
SNX4-205ENST00000482965 WDR18Q9BV38 432 aa10.46□□□□□ -0.73
SNX4-205ENST00000482965 CFHR5Q9BXR6 569 aa10.46□□□□□ -0.73
SNX4-205ENST00000482965 MKNK2Q9HBH9 465 aa10.46□□□□□ -0.73
SNX4-205ENST00000482965 ZFYVE28Q9HCC9 887 aa10.46□□□□□ -0.73
SNX4-205ENST00000482965 ZCCHC17Q9NP64 241 aaKnown RBP10.46□□□□□ -0.73
SNX4-205ENST00000482965 ROBO3Q96MS0 1386 aa10.46□□□□□ -0.74
SNX4-205ENST00000482965 USP17L10C9JJH3 530 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 GPR25O00155 361 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 PDHXO00330 501 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 FOXP2O15409 715 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 HSPD1P10809 573 aaKnown RBP10.45□□□□□ -0.74
SNX4-205ENST00000482965 AKR1B1P15121 316 aa10.45□□□□□ -0.74
SNX4-205ENST00000482965 HMGCS2P54868 508 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms