RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 MFAP1P55081 439 aaKnown RBP19.84■□□□□ 0.77
HMGN1-214ENST00000482733 NMIQ13287 307 aaPredicted RBP19.84■□□□□ 0.77
HMGN1-214ENST00000482733 IFNL3Q8IZI9 196 aa19.84■□□□□ 0.77
HMGN1-214ENST00000482733 FAM227BQ96M60 508 aa19.84■□□□□ 0.77
HMGN1-214ENST00000482733 CFHR5Q9BXR6 569 aa19.84■□□□□ 0.77
HMGN1-214ENST00000482733 ZCCHC17Q9NP64 241 aaKnown RBP19.84■□□□□ 0.77
HMGN1-214ENST00000482733 CABP5Q9NP86 173 aa19.84■□□□□ 0.77
HMGN1-214ENST00000482733 PRDM10Q9NQV6 1147 aa19.84■□□□□ 0.77
HMGN1-214ENST00000482733 DIAPH3Q9NSV4 1193 aa19.84■□□□□ 0.77
HMGN1-214ENST00000482733 ZBTB21Q9ULJ3 1066 aa19.84■□□□□ 0.77
HMGN1-214ENST00000482733 NAV1Q8NEY1 1877 aa19.84■□□□□ 0.77
HMGN1-214ENST00000482733 MYH1P12882 1939 aa19.83■□□□□ 0.77
HMGN1-214ENST00000482733 A0A0D9SFI3 127 aa19.83■□□□□ 0.77
HMGN1-214ENST00000482733 IGF2BP3O00425 579 aaKnown RBP eCLIP19.83■□□□□ 0.77
HMGN1-214ENST00000482733 GDF11O95390 407 aa19.83■□□□□ 0.77
HMGN1-214ENST00000482733 FASTKD5Q7L8L6 764 aaKnown RBP19.83■□□□□ 0.77
HMGN1-214ENST00000482733 ZNF280CQ8ND82 737 aa19.83■□□□□ 0.77
HMGN1-214ENST00000482733 PTPN18Q99952 460 aa19.83■□□□□ 0.77
HMGN1-214ENST00000482733 WDR18Q9BV38 432 aa19.83■□□□□ 0.77
HMGN1-214ENST00000482733 EPB41L4AQ9HCS5 686 aaPredicted RBP19.83■□□□□ 0.77
HMGN1-214ENST00000482733 SIPA1L1O43166 1804 aa19.83■□□□□ 0.76
HMGN1-214ENST00000482733 A0A0G2JLL6 359 aaPredicted RBP19.82■□□□□ 0.76
HMGN1-214ENST00000482733 LBX1P52954 281 aa19.82■□□□□ 0.76
HMGN1-214ENST00000482733 ABCB5Q2M3G0 1257 aa19.82■□□□□ 0.76
HMGN1-214ENST00000482733 CCDC129Q6ZRS4 1044 aa19.82■□□□□ 0.76
HMGN1-214ENST00000482733 C16orf86Q6ZW13 317 aa19.82■□□□□ 0.76
HMGN1-214ENST00000482733 PRRT2Q7Z6L0 340 aaPredicted RBP19.82■□□□□ 0.76
HMGN1-214ENST00000482733 DYNLL2Q96FJ2 89 aa19.82■□□□□ 0.76
HMGN1-214ENST00000482733 NAPBQ9H115 298 aa19.82■□□□□ 0.76
HMGN1-214ENST00000482733 CYP2D7A0A087X1C5 515 aa19.81■□□□□ 0.76
HMGN1-214ENST00000482733 TRIM75PA6NK02 468 aa19.81■□□□□ 0.76
HMGN1-214ENST00000482733 GH2P01242 217 aa19.81■□□□□ 0.76
HMGN1-214ENST00000482733 ANKRD23Q86SG2 305 aa19.81■□□□□ 0.76
HMGN1-214ENST00000482733 CCDC17Q96LX7 622 aa19.81■□□□□ 0.76
HMGN1-214ENST00000482733 ZNF287Q9HBT7 754 aa19.81■□□□□ 0.76
HMGN1-214ENST00000482733 PPP4R2Q9NY27 417 aa19.81■□□□□ 0.76
HMGN1-214ENST00000482733 TSKSQ9UJT2 592 aa19.81■□□□□ 0.76
HMGN1-214ENST00000482733 DOCK1Q14185 1865 aa19.81■□□□□ 0.76
HMGN1-214ENST00000482733 CCDC171Q6TFL3 1326 aa19.8■□□□□ 0.76
HMGN1-214ENST00000482733 MINDY4BA8MYZ0 360 aa19.8■□□□□ 0.76
HMGN1-214ENST00000482733 BTBD19C9JJ37 291 aa19.8■□□□□ 0.76
HMGN1-214ENST00000482733 CDK8P49336 464 aa19.8■□□□□ 0.76
HMGN1-214ENST00000482733 JAG1P78504 1218 aa19.8■□□□□ 0.76
HMGN1-214ENST00000482733 EVX2Q03828 476 aa19.8■□□□□ 0.76
HMGN1-214ENST00000482733 SPP2Q13103 211 aa19.8■□□□□ 0.76
HMGN1-214ENST00000482733 NOM1Q5C9Z4 860 aaKnown RBP19.8■□□□□ 0.76
HMGN1-214ENST00000482733 CWC27Q6UX04 472 aaKnown RBP19.8■□□□□ 0.76
HMGN1-214ENST00000482733 CCDC84Q86UT8 332 aaPredicted RBP19.8■□□□□ 0.76
HMGN1-214ENST00000482733 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.8■□□□□ 0.76
HMGN1-214ENST00000482733 LAMB1P07942 1786 aa19.8■□□□□ 0.76
HMGN1-214ENST00000482733 TBC1D8O95759 1140 aa19.79■□□□□ 0.76
HMGN1-214ENST00000482733 SLC3A2P08195 630 aaKnown RBP19.79■□□□□ 0.76
HMGN1-214ENST00000482733 ALX1Q15699 326 aa19.79■□□□□ 0.76
HMGN1-214ENST00000482733 FAM43AQ8N2R8 423 aa19.79■□□□□ 0.76
HMGN1-214ENST00000482733 SLC44A5Q8NCS7 719 aa19.79■□□□□ 0.76
HMGN1-214ENST00000482733 ROBO3Q96MS0 1386 aa19.79■□□□□ 0.76
HMGN1-214ENST00000482733 C19orf81C9J6K1 198 aa19.78■□□□□ 0.76
HMGN1-214ENST00000482733 MPHOSPH10O00566 681 aaKnown RBP19.78■□□□□ 0.76
HMGN1-214ENST00000482733 MOGSQ13724 837 aa19.78■□□□□ 0.76
HMGN1-214ENST00000482733 RAB3GAP1Q15042 981 aa19.78■□□□□ 0.76
HMGN1-214ENST00000482733 TMEM179Q6ZVK1 233 aa19.78■□□□□ 0.76
HMGN1-214ENST00000482733 ZNF589Q86UQ0 364 aaPredicted RBP19.78■□□□□ 0.76
HMGN1-214ENST00000482733 PROCA1Q8NCQ7 364 aaPredicted RBP19.78■□□□□ 0.76
HMGN1-214ENST00000482733 ZFYVE28Q9HCC9 887 aa19.78■□□□□ 0.76
HMGN1-214ENST00000482733 USP17L10C9JJH3 530 aa19.77■□□□□ 0.76
HMGN1-214ENST00000482733 FOXP2O15409 715 aa19.77■□□□□ 0.76
HMGN1-214ENST00000482733 HSPD1P10809 573 aaKnown RBP19.77■□□□□ 0.76
HMGN1-214ENST00000482733 BACE1P56817 501 aa19.77■□□□□ 0.76
HMGN1-214ENST00000482733 TAF1CQ15572 869 aaPredicted RBP19.77■□□□□ 0.76
HMGN1-214ENST00000482733 SHROOM1Q2M3G4 852 aaPredicted RBP19.77■□□□□ 0.76
HMGN1-214ENST00000482733 SH3D19Q5HYK7 790 aa19.77■□□□□ 0.76
HMGN1-214ENST00000482733 VPS53Q5VIR6 699 aa19.77■□□□□ 0.76
HMGN1-214ENST00000482733 GADL1Q6ZQY3 521 aa19.77■□□□□ 0.76
HMGN1-214ENST00000482733 RUFY2Q8WXA3 655 aa19.77■□□□□ 0.76
HMGN1-214ENST00000482733 MKNK2Q9HBH9 465 aa19.77■□□□□ 0.76
HMGN1-214ENST00000482733 SLC45A1Q9Y2W3 748 aa19.77■□□□□ 0.76
HMGN1-214ENST00000482733 ZMYM6O95789 1325 aa19.76■□□□□ 0.75
HMGN1-214ENST00000482733 SMIM22K7EJ46 135 aa19.76■□□□□ 0.75
HMGN1-214ENST00000482733 PDHXO00330 501 aa19.76■□□□□ 0.75
HMGN1-214ENST00000482733 PDE4BQ07343 736 aa19.76■□□□□ 0.75
HMGN1-214ENST00000482733 PPARAQ07869 468 aa19.76■□□□□ 0.75
HMGN1-214ENST00000482733 CRHR2Q13324 411 aa19.76■□□□□ 0.75
HMGN1-214ENST00000482733 GPAT2Q6NUI2 795 aa19.76■□□□□ 0.75
HMGN1-214ENST00000482733 TMOD4Q9NZQ9 345 aa19.76■□□□□ 0.75
HMGN1-214ENST00000482733 RAD50Q92878 1312 aa19.76■□□□□ 0.75
HMGN1-214ENST00000482733 GPR25O00155 361 aa19.75■□□□□ 0.75
HMGN1-214ENST00000482733 AKR1B1P15121 316 aa19.75■□□□□ 0.75
HMGN1-214ENST00000482733 USP14P54578 494 aa19.75■□□□□ 0.75
HMGN1-214ENST00000482733 HMGCS2P54868 508 aa19.75■□□□□ 0.75
HMGN1-214ENST00000482733 PABPC4Q13310 644 aaKnown RBP eCLIP19.75■□□□□ 0.758e-10■■□□□ 13.3
HMGN1-214ENST00000482733 MTMR2Q13614 643 aa19.75■□□□□ 0.75
HMGN1-214ENST00000482733 BMP2KLQ5H9B9 411 aa19.75■□□□□ 0.75
HMGN1-214ENST00000482733 PARK7Q99497 189 aaKnown RBP19.75■□□□□ 0.75
HMGN1-214ENST00000482733 ANAPC4Q9UJX5 808 aa19.75■□□□□ 0.75
HMGN1-214ENST00000482733 AGTPBP1Q9UPW5 1226 aa19.75■□□□□ 0.75
HMGN1-214ENST00000482733 FGAP02671 866 aa19.74■□□□□ 0.75
HMGN1-214ENST00000482733 CHMLP26374 656 aa19.74■□□□□ 0.75
HMGN1-214ENST00000482733 GUCY1A2P33402 732 aa19.74■□□□□ 0.75
HMGN1-214ENST00000482733 SEPT2Q15019 361 aa19.74■□□□□ 0.75
HMGN1-214ENST00000482733 USP17L2Q6R6M4 530 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms