RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 STARD13Q9Y3M8 1113 aa9.43□□□□□ -0.9
SNX13-208ENST00000482558 USP3Q9Y6I4 520 aa9.43□□□□□ -0.9
SNX13-208ENST00000482558 CEMIPQ8WUJ3 1361 aa9.42□□□□□ -0.9
SNX13-208ENST00000482558 SCNN1AP37088 669 aa9.42□□□□□ -0.9
SNX13-208ENST00000482558 LRP8Q14114 963 aa9.42□□□□□ -0.9
SNX13-208ENST00000482558 C9orf131Q5VYM1 1079 aa9.42□□□□□ -0.9
SNX13-208ENST00000482558 CASC1Q6TDU7 716 aa9.42□□□□□ -0.9
SNX13-208ENST00000482558 SLC9A9Q8IVB4 645 aa9.42□□□□□ -0.9
SNX13-208ENST00000482558 MICALL1Q8N3F8 863 aa9.42□□□□□ -0.9
SNX13-208ENST00000482558 GPATCH3Q96I76 525 aa9.42□□□□□ -0.9
SNX13-208ENST00000482558 SCHIP1Q9P0W5 487 aaPredicted RBP9.42□□□□□ -0.9
SNX13-208ENST00000482558 RGS12O14924 1447 aa9.41□□□□□ -0.9
SNX13-208ENST00000482558 C9orf172C9J069 976 aa9.41□□□□□ -0.9
SNX13-208ENST00000482558 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
SNX13-208ENST00000482558 PPP1R12BO60237 982 aaPredicted RBP9.41□□□□□ -0.9
SNX13-208ENST00000482558 PTCD1O75127 700 aaKnown RBP9.41□□□□□ -0.9
SNX13-208ENST00000482558 NID1P14543 1247 aa9.41□□□□□ -0.9
SNX13-208ENST00000482558 RAD51AP2Q09MP3 1159 aa9.41□□□□□ -0.9
SNX13-208ENST00000482558 MRPL58Q14197 206 aaKnown RBP9.41□□□□□ -0.9
SNX13-208ENST00000482558 AKAP4Q5JQC9 854 aa9.41□□□□□ -0.9
SNX13-208ENST00000482558 DHX38Q92620 1227 aaKnown RBP9.41□□□□□ -0.9
SNX13-208ENST00000482558 KCNB2Q92953 911 aa9.41□□□□□ -0.9
SNX13-208ENST00000482558 VTI1AQ96AJ9 217 aa9.41□□□□□ -0.9
SNX13-208ENST00000482558 TINF2Q9BSI4 451 aa9.41□□□□□ -0.9
SNX13-208ENST00000482558 CHMP3Q9Y3E7 222 aa9.41□□□□□ -0.9
SNX13-208ENST00000482558 LTN1O94822 1766 aa9.41□□□□□ -0.9
SNX13-208ENST00000482558 ABCC6O95255 1503 aa9.41□□□□□ -0.9
SNX13-208ENST00000482558 H3BRB1 525 aa9.4□□□□□ -0.9
SNX13-208ENST00000482558 CDC45O75419 566 aa9.4□□□□□ -0.9
SNX13-208ENST00000482558 ALBP02768 609 aa9.4□□□□□ -0.9
SNX13-208ENST00000482558 GCP02774 474 aa9.4□□□□□ -0.9
SNX13-208ENST00000482558 GNAI2P04899 355 aa9.4□□□□□ -0.9
SNX13-208ENST00000482558 GTF2F1P35269 517 aaKnown RBP eCLIP9.4□□□□□ -0.9
SNX13-208ENST00000482558 TBCELQ5QJ74 424 aa9.4□□□□□ -0.9
SNX13-208ENST00000482558 ARHGEF25Q86VW2 580 aa9.4□□□□□ -0.9
SNX13-208ENST00000482558 SPACA7Q96KW9 195 aa9.4□□□□□ -0.9
SNX13-208ENST00000482558 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.9
SNX13-208ENST00000482558 DCTN4Q9UJW0 460 aa9.4□□□□□ -0.9
SNX13-208ENST00000482558 ABL1P00519 1130 aa9.39□□□□□ -0.91
SNX13-208ENST00000482558 TXLNAP40222 546 aa9.39□□□□□ -0.91
SNX13-208ENST00000482558 PSMA6P60900 246 aaKnown RBP9.39□□□□□ -0.91
SNX13-208ENST00000482558 ADGRE1Q14246 886 aa9.39□□□□□ -0.91
SNX13-208ENST00000482558 TEAD4Q15561 434 aa9.39□□□□□ -0.91
SNX13-208ENST00000482558 CEP85Q6P2H3 762 aa9.39□□□□□ -0.91
SNX13-208ENST00000482558 SIRT2Q8IXJ6 389 aa9.39□□□□□ -0.91
SNX13-208ENST00000482558 IL17REQ8NFR9 667 aa9.39□□□□□ -0.91
SNX13-208ENST00000482558 SNX21Q969T3 373 aa9.39□□□□□ -0.91
SNX13-208ENST00000482558 KLHL42Q9P2K6 505 aa9.39□□□□□ -0.91
SNX13-208ENST00000482558 ATP10DQ9P241 1426 aa9.39□□□□□ -0.91
SNX13-208ENST00000482558 MED1Q15648 1581 aaPredicted RBP9.38□□□□□ -0.91
SNX13-208ENST00000482558 EML1O00423 815 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 C21orf2O43822 256 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 ATF3P18847 181 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 ADH7P40394 386 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 ANAPC15P60006 121 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 TEFQ10587 303 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 GRIK4Q16099 956 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 C1orf141Q5JVX7 400 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 LRRC69Q6ZNQ3 347 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 KRT28Q7Z3Y7 464 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 NT5DC4Q86YG4 428 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 GLYCTKQ8IVS8 523 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 HSCBQ8IWL3 235 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 SRCIN1Q9C0H9 1055 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 MAGEC2Q9UBF1 373 aaPredicted RBP9.38□□□□□ -0.91
SNX13-208ENST00000482558 C1orf167Q5SNV9 1468 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 LMO7Q8WWI1 1683 aa9.38□□□□□ -0.91
SNX13-208ENST00000482558 IBTKQ9P2D0 1353 aaPredicted RBP9.37□□□□□ -0.91
SNX13-208ENST00000482558 N4BP2Q86UW6 1770 aaPredicted RBP9.37□□□□□ -0.91
SNX13-208ENST00000482558 CAMTA1Q9Y6Y1 1673 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 ICMTO60725 284 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 NFKBIBQ15653 356 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 NUTM2GQ5VZR2 741 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 C20orf204Q6ZNR8 217 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 ZCRB1Q8TBF4 217 aaKnown RBP9.37□□□□□ -0.91
SNX13-208ENST00000482558 MORC4Q8TE76 937 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 ZDHHC1Q8WTX9 485 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 C7orf43Q8WVR3 580 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 COL26A1Q96A83 441 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 SLC30A3Q99726 388 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 BRINP2Q9C0B6 783 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 CCSER2Q9H7U1 834 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 NEUROD4Q9HD90 331 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 PARP3Q9Y6F1 533 aa9.37□□□□□ -0.91
SNX13-208ENST00000482558 TRPM3Q9HCF6 1732 aaPredicted RBP9.36□□□□□ -0.91
SNX13-208ENST00000482558 FAM208AQ9UK61 1670 aaKnown RBP9.36□□□□□ -0.91
SNX13-208ENST00000482558 EPB41L2O43491 1005 aaKnown RBP9.36□□□□□ -0.91
SNX13-208ENST00000482558 ELNP15502 786 aa9.36□□□□□ -0.91
SNX13-208ENST00000482558 PTMSP20962 102 aa9.36□□□□□ -0.91
SNX13-208ENST00000482558 DEKP35659 375 aaKnown RBP9.36□□□□□ -0.91
SNX13-208ENST00000482558 NRG1Q02297 640 aaPredicted RBP9.36□□□□□ -0.91
SNX13-208ENST00000482558 SPEM2Q0P670 501 aa9.36□□□□□ -0.91
SNX13-208ENST00000482558 ZNF211Q13398 564 aaPredicted RBP9.36□□□□□ -0.91
SNX13-208ENST00000482558 GNL2Q13823 731 aaKnown RBP9.36□□□□□ -0.91
SNX13-208ENST00000482558 MBTPS1Q14703 1052 aa9.36□□□□□ -0.91
SNX13-208ENST00000482558 HSP90AB4PQ58FF6 505 aa9.36□□□□□ -0.91
SNX13-208ENST00000482558 TTC22Q5TAA0 569 aa9.36□□□□□ -0.91
SNX13-208ENST00000482558 NBPF6Q5VWK0 638 aa9.36□□□□□ -0.91
SNX13-208ENST00000482558 FBXO41Q8TF61 875 aa9.36□□□□□ -0.91
SNX13-208ENST00000482558 LTV1Q96GA3 475 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms