RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 BMP3P12645 472 aa8.92□□□□□ -0.98
SF3B1-210ENST00000482158 USP11P51784 963 aa8.92□□□□□ -0.98
SF3B1-210ENST00000482158 LRRFIP1Q32MZ4 808 aaKnown RBP8.92□□□□□ -0.98
SF3B1-210ENST00000482158 CDCP2Q5VXM1 449 aa8.92□□□□□ -0.98
SF3B1-210ENST00000482158 SEZ6L2Q6UXD5 910 aa8.92□□□□□ -0.98
SF3B1-210ENST00000482158 OR6P1Q8NGX9 317 aa8.92□□□□□ -0.98
SF3B1-210ENST00000482158 UTP4Q969X6 686 aaKnown RBP8.92□□□□□ -0.98
SF3B1-210ENST00000482158 CNNM2Q9H8M5 875 aa8.92□□□□□ -0.98
SF3B1-210ENST00000482158 PRKAG3Q9UGI9 489 aa8.92□□□□□ -0.98
SF3B1-210ENST00000482158 KLHL3Q9UH77 587 aa8.92□□□□□ -0.98
SF3B1-210ENST00000482158 PCOLCE2Q9UKZ9 415 aa8.92□□□□□ -0.98
SF3B1-210ENST00000482158 SMAD7O15105 426 aaKnown RBP8.91□□□□□ -0.98
SF3B1-210ENST00000482158 KLF4O43474 513 aa8.91□□□□□ -0.98
SF3B1-210ENST00000482158 NME1P15531 152 aaKnown RBP8.91□□□□□ -0.98
SF3B1-210ENST00000482158 SLC6A19Q695T7 634 aa8.91□□□□□ -0.98
SF3B1-210ENST00000482158 SLFN12Q8IYM2 578 aa8.91□□□□□ -0.98
SF3B1-210ENST00000482158 KCT2Q8NC54 265 aa8.91□□□□□ -0.98
SF3B1-210ENST00000482158 PSMG3-AS1Q96PY0 264 aa8.91□□□□□ -0.98
SF3B1-210ENST00000482158 CRBNQ96SW2 442 aa8.91□□□□□ -0.98
SF3B1-210ENST00000482158 DPH2Q9BQC3 489 aaPredicted RBP8.91□□□□□ -0.98
SF3B1-210ENST00000482158 CST3P01034 146 aaPredicted RBP8.9□□□□□ -0.98
SF3B1-210ENST00000482158 MAP4P27816 1152 aaKnown RBP8.9□□□□□ -0.98
SF3B1-210ENST00000482158 ARSHQ5FYA8 562 aa8.9□□□□□ -0.98
SF3B1-210ENST00000482158 PRAMEF13Q5VWM6 474 aa8.9□□□□□ -0.98
SF3B1-210ENST00000482158 ANKS3Q6ZW76 656 aa8.9□□□□□ -0.98
SF3B1-210ENST00000482158 CDC37L1Q7L3B6 337 aa8.9□□□□□ -0.98
SF3B1-210ENST00000482158 NLRC3Q7RTR2 1065 aa8.9□□□□□ -0.98
SF3B1-210ENST00000482158 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.9□□□□□ -0.98
SF3B1-210ENST00000482158 FAM13CQ8NE31 585 aa8.9□□□□□ -0.98
SF3B1-210ENST00000482158 HNRNPLLQ8WVV9 542 aaKnown RBP8.9□□□□□ -0.98
SF3B1-210ENST00000482158 TNKS2Q9H2K2 1166 aa8.9□□□□□ -0.98
SF3B1-210ENST00000482158 LGR6Q9HBX8 967 aa8.9□□□□□ -0.98
SF3B1-210ENST00000482158 DAGLAQ9Y4D2 1042 aa8.9□□□□□ -0.98
SF3B1-210ENST00000482158 TNFRSF10CO14798 259 aa8.89□□□□□ -0.99
SF3B1-210ENST00000482158 CASP7P55210 303 aa8.89□□□□□ -0.99
SF3B1-210ENST00000482158 MLECQ14165 292 aa8.89□□□□□ -0.99
SF3B1-210ENST00000482158 TAB3Q8N5C8 712 aaPredicted RBP8.89□□□□□ -0.99
SF3B1-210ENST00000482158 SLC9A7Q96T83 725 aa8.89□□□□□ -0.99
SF3B1-210ENST00000482158 TM9SF2Q99805 663 aa8.89□□□□□ -0.99
SF3B1-210ENST00000482158 HIRIP3Q9BW71 556 aaPredicted RBP8.89□□□□□ -0.99
SF3B1-210ENST00000482158 SSU72Q9NP77 194 aaKnown RBP8.89□□□□□ -0.99
SF3B1-210ENST00000482158 C1GALT1Q9NS00 363 aa8.89□□□□□ -0.99
SF3B1-210ENST00000482158 GATA4P43694 442 aa8.88□□□□□ -0.99
SF3B1-210ENST00000482158 ZYXQ15942 572 aaKnown RBP8.88□□□□□ -0.99
SF3B1-210ENST00000482158 PLA2G4EQ3MJ16 856 aa8.88□□□□□ -0.99
SF3B1-210ENST00000482158 INTS3Q68E01 1043 aaKnown RBP8.88□□□□□ -0.99
SF3B1-210ENST00000482158 ARMCX6Q7L4S7 300 aa8.88□□□□□ -0.99
SF3B1-210ENST00000482158 C19orf47Q8N9M1 422 aaKnown RBP8.88□□□□□ -0.99
SF3B1-210ENST00000482158 FOXQ1Q9C009 403 aa8.88□□□□□ -0.99
SF3B1-210ENST00000482158 A0A1W2PQH9 124 aa8.87□□□□□ -0.99
SF3B1-210ENST00000482158 LRIG2O94898 1065 aa8.87□□□□□ -0.99
SF3B1-210ENST00000482158 GUCY2CP25092 1073 aa8.87□□□□□ -0.99
SF3B1-210ENST00000482158 POLR2BP30876 1174 aaKnown RBP8.87□□□□□ -0.99
SF3B1-210ENST00000482158 YARSP54577 528 aaKnown RBP8.87□□□□□ -0.99
SF3B1-210ENST00000482158 PPP1R13LQ8WUF5 828 aa8.87□□□□□ -0.99
SF3B1-210ENST00000482158 LNPKQ9C0E8 428 aa8.87□□□□□ -0.99
SF3B1-210ENST00000482158 FAM95CA0A1B0GW59 222 aa8.86□□□□□ -0.99
SF3B1-210ENST00000482158 DHX15O43143 795 aaKnown RBP8.86□□□□□ -0.99
SF3B1-210ENST00000482158 GDF11O95390 407 aa8.86□□□□□ -0.99
SF3B1-210ENST00000482158 RXRBP28702 533 aa8.86□□□□□ -0.99
SF3B1-210ENST00000482158 SERINC3Q13530 473 aa8.86□□□□□ -0.99
SF3B1-210ENST00000482158 TNNI3KQ59H18 835 aa8.86□□□□□ -0.99
SF3B1-210ENST00000482158 UNC5AQ6ZN44 842 aa8.86□□□□□ -0.99
SF3B1-210ENST00000482158 BEND4Q6ZU67 534 aa8.86□□□□□ -0.99
SF3B1-210ENST00000482158 DPH6Q7L8W6 267 aa8.86□□□□□ -0.99
SF3B1-210ENST00000482158 TTC6Q86TZ1 520 aa8.86□□□□□ -0.99
SF3B1-210ENST00000482158 CKAP2LQ8IYA6 745 aa8.86□□□□□ -0.99
SF3B1-210ENST00000482158 PMFBP1Q8TBY8 1022 aa8.86□□□□□ -0.99
SF3B1-210ENST00000482158 KIF2CQ99661 725 aa8.86□□□□□ -0.99
SF3B1-210ENST00000482158 YIPF2Q9BWQ6 316 aa8.86□□□□□ -0.99
SF3B1-210ENST00000482158 LTBP3Q9NS15 1303 aa8.85□□□□□ -0.99
SF3B1-210ENST00000482158 RBAK-RBAKDNI3L0D1 243 aa8.85□□□□□ -0.99
SF3B1-210ENST00000482158 RGS13O14921 159 aa8.85□□□□□ -0.99
SF3B1-210ENST00000482158 UBOX5O94941 541 aa8.85□□□□□ -0.99
SF3B1-210ENST00000482158 RAB33AQ14088 237 aa8.85□□□□□ -0.99
SF3B1-210ENST00000482158 MAP7Q14244 749 aa8.85□□□□□ -0.99
SF3B1-210ENST00000482158 CLEC10AQ8IUN9 316 aa8.85□□□□□ -0.99
SF3B1-210ENST00000482158 CELF2-AS1Q8N7Q2 184 aa8.85□□□□□ -0.99
SF3B1-210ENST00000482158 BAHD1Q8TBE0 780 aaPredicted RBP8.85□□□□□ -0.99
SF3B1-210ENST00000482158 GATA6Q92908 595 aa8.85□□□□□ -0.99
SF3B1-210ENST00000482158 TP53INP1Q96A56 240 aa8.85□□□□□ -0.99
SF3B1-210ENST00000482158 FAM83CQ9BQN1 747 aa8.85□□□□□ -0.99
SF3B1-210ENST00000482158 KCNF1Q9H3M0 494 aa8.85□□□□□ -0.99
SF3B1-210ENST00000482158 TPSG1Q9NRR2 321 aa8.85□□□□□ -0.99
SF3B1-210ENST00000482158 COL17A1Q9UMD9 1497 aaPredicted RBP8.84□□□□□ -0.99
SF3B1-210ENST00000482158 RAG1P15918 1043 aa8.84□□□□□ -0.99
SF3B1-210ENST00000482158 CDK5R2Q13319 367 aa8.84□□□□□ -0.99
SF3B1-210ENST00000482158 NFKBIBQ15653 356 aa8.84□□□□□ -0.99
SF3B1-210ENST00000482158 NBPF6Q5VWK0 638 aa8.84□□□□□ -0.99
SF3B1-210ENST00000482158 SHISA5Q8N114 240 aa8.84□□□□□ -0.99
SF3B1-210ENST00000482158 TMEM151AQ8N4L1 468 aa8.84□□□□□ -0.99
SF3B1-210ENST00000482158 MFSD2AQ8NA29 543 aa8.84□□□□□ -0.99
SF3B1-210ENST00000482158 RIN3Q8TB24 985 aa8.84□□□□□ -0.99
SF3B1-210ENST00000482158 MICAL1Q8TDZ2 1067 aa8.84□□□□□ -0.99
SF3B1-210ENST00000482158 XAGE3Q8WTP9 111 aa8.84□□□□□ -0.99
SF3B1-210ENST00000482158 CYB5D2Q8WUJ1 264 aa8.84□□□□□ -0.99
SF3B1-210ENST00000482158 NBPF4Q96M43 638 aa8.84□□□□□ -0.99
SF3B1-210ENST00000482158 ACTR10Q9NZ32 417 aa8.84□□□□□ -0.99
SF3B1-210ENST00000482158 HMX2A2RU54 273 aa8.83□□□□□ -1
SF3B1-210ENST00000482158 SLITRK5O94991 958 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms