RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 ATAD5Q96QE3 1844 aa20.48■□□□□ 0.87
NUP58-212ENST00000481980 HOXA7P31268 230 aaPredicted RBP20.47■□□□□ 0.87
NUP58-212ENST00000481980 ZAP70P43403 619 aa20.47■□□□□ 0.87
NUP58-212ENST00000481980 CRACR2BQ8N4Y2 399 aaPredicted RBP20.47■□□□□ 0.87
NUP58-212ENST00000481980 TRIM34Q9BYJ4 488 aa20.47■□□□□ 0.87
NUP58-212ENST00000481980 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.47■□□□□ 0.87
NUP58-212ENST00000481980 PIH1D3Q9NQM4 214 aaKnown RBP20.47■□□□□ 0.87
NUP58-212ENST00000481980 GINM1Q9NU53 330 aa20.47■□□□□ 0.87
NUP58-212ENST00000481980 TMOD4Q9NZQ9 345 aa20.47■□□□□ 0.87
NUP58-212ENST00000481980 PALD1Q9ULE6 856 aa20.47■□□□□ 0.87
NUP58-212ENST00000481980 NOP58Q9Y2X3 529 aaKnown RBP20.47■□□□□ 0.87
NUP58-212ENST00000481980 C19orf81C9J6K1 198 aa20.46■□□□□ 0.87
NUP58-212ENST00000481980 EVI5O60447 810 aa20.46■□□□□ 0.87
NUP58-212ENST00000481980 HMGCRP04035 888 aa20.46■□□□□ 0.87
NUP58-212ENST00000481980 IRX3P78415 501 aaPredicted RBP20.46■□□□□ 0.87
NUP58-212ENST00000481980 P2RX7Q99572 595 aaKnown RBP20.46■□□□□ 0.87
NUP58-212ENST00000481980 C1orf115Q9H7X2 142 aa20.46■□□□□ 0.87
NUP58-212ENST00000481980 DBNLQ9UJU6 430 aaKnown RBP20.46■□□□□ 0.87
NUP58-212ENST00000481980 SIPA1L1O43166 1804 aa20.46■□□□□ 0.87
NUP58-212ENST00000481980 MAST2Q6P0Q8 1798 aa20.45■□□□□ 0.86
NUP58-212ENST00000481980 PAWRQ96IZ0 340 aaKnown RBP20.45■□□□□ 0.86
NUP58-212ENST00000481980 SAP30BPQ9UHR5 308 aaKnown RBP20.45■□□□□ 0.86
NUP58-212ENST00000481980 LAMA3Q16787 3333 aa20.44■□□□□ 0.86
NUP58-212ENST00000481980 USP17L10C9JJH3 530 aa20.44■□□□□ 0.86
NUP58-212ENST00000481980 GDF11O95390 407 aa20.44■□□□□ 0.86
NUP58-212ENST00000481980 DYNLL1P63167 89 aaKnown RBP20.44■□□□□ 0.86
NUP58-212ENST00000481980 SHROOM1Q2M3G4 852 aaPredicted RBP20.44■□□□□ 0.86
NUP58-212ENST00000481980 NECAB2Q7Z6G3 386 aa20.44■□□□□ 0.86
NUP58-212ENST00000481980 ZBTB21Q9ULJ3 1066 aa20.44■□□□□ 0.86
NUP58-212ENST00000481980 HLA-DOAP06340 250 aa20.43■□□□□ 0.86
NUP58-212ENST00000481980 CYP7A1P22680 504 aa20.43■□□□□ 0.86
NUP58-212ENST00000481980 HERVK_113P62684 666 aa20.43■□□□□ 0.86
NUP58-212ENST00000481980 ANKLE1Q8NAG6 615 aa20.43■□□□□ 0.86
NUP58-212ENST00000481980 GPRC5AQ8NFJ5 357 aa20.43■□□□□ 0.86
NUP58-212ENST00000481980 EAF2Q96CJ1 260 aaPredicted RBP20.43■□□□□ 0.86
NUP58-212ENST00000481980 CCDC8Q9H0W5 538 aaPredicted RBP20.43■□□□□ 0.86
NUP58-212ENST00000481980 HMX1Q9NP08 348 aaPredicted RBP20.43■□□□□ 0.86
NUP58-212ENST00000481980 TLR7Q9NYK1 1049 aaKnown RBP20.43■□□□□ 0.86
NUP58-212ENST00000481980 RPTORQ8N122 1335 aa20.43■□□□□ 0.86
NUP58-212ENST00000481980 TRIM32Q13049 653 aa20.42■□□□□ 0.86
NUP58-212ENST00000481980 ITPRIPQ8IWB1 547 aa20.42■□□□□ 0.86
NUP58-212ENST00000481980 DIS3LQ8TF46 1054 aaKnown RBP20.42■□□□□ 0.86
NUP58-212ENST00000481980 TXNRD2Q9NNW7 524 aa20.42■□□□□ 0.86
NUP58-212ENST00000481980 RBPJLQ9UBG7 517 aa20.42■□□□□ 0.86
NUP58-212ENST00000481980 PEX10O60683 326 aa20.41■□□□□ 0.86
NUP58-212ENST00000481980 IDH1O75874 414 aaKnown RBP20.41■□□□□ 0.86
NUP58-212ENST00000481980 RLBP1P12271 317 aa20.41■□□□□ 0.86
NUP58-212ENST00000481980 PDE3AQ14432 1141 aa20.41■□□□□ 0.86
NUP58-212ENST00000481980 CERS3Q8IU89 383 aa20.41■□□□□ 0.86
NUP58-212ENST00000481980 TRIB2Q92519 343 aa20.41■□□□□ 0.86
NUP58-212ENST00000481980 CHMP4BQ9H444 224 aaKnown RBP20.41■□□□□ 0.86
NUP58-212ENST00000481980 EMILIN3Q9NT22 766 aa20.41■□□□□ 0.86
NUP58-212ENST00000481980 FOCADQ5VW36 1801 aa20.41■□□□□ 0.86
NUP58-212ENST00000481980 CDK5RAP2Q96SN8 1893 aa20.41■□□□□ 0.86
NUP58-212ENST00000481980 A0A1W2PPC1 479 aa20.4■□□□□ 0.86
NUP58-212ENST00000481980 XRCC5P13010 732 aaKnown RBP20.4■□□□□ 0.86
NUP58-212ENST00000481980 CYP2B6P20813 491 aa20.4■□□□□ 0.86
NUP58-212ENST00000481980 MIGA1Q8NAN2 632 aa20.4■□□□□ 0.86
NUP58-212ENST00000481980 SOCS4Q8WXH5 440 aa20.4■□□□□ 0.86
NUP58-212ENST00000481980 NUDT12Q9BQG2 462 aa20.4■□□□□ 0.86
NUP58-212ENST00000481980 MYO5AQ9Y4I1 1855 aaKnown RBP20.39■□□□□ 0.86
NUP58-212ENST00000481980 GH2P01242 217 aa20.39■□□□□ 0.85
NUP58-212ENST00000481980 MAPK4P31152 587 aa20.39■□□□□ 0.85
NUP58-212ENST00000481980 USP5P45974 858 aa20.39■□□□□ 0.85
NUP58-212ENST00000481980 MAP3K21Q5TCX8 1036 aa20.39■□□□□ 0.85
NUP58-212ENST00000481980 TATDN1Q6P1N9 297 aa20.39■□□□□ 0.85
NUP58-212ENST00000481980 USP17L2Q6R6M4 530 aa20.39■□□□□ 0.85
NUP58-212ENST00000481980 MAGEB6Q8N7X4 407 aa20.39■□□□□ 0.85
NUP58-212ENST00000481980 GTF3C2Q8WUA4 911 aaPredicted RBP20.39■□□□□ 0.85
NUP58-212ENST00000481980 ERVK-9P63128 1117 aa20.38■□□□□ 0.85
NUP58-212ENST00000481980 ERVK-24P63145 666 aa20.38■□□□□ 0.85
NUP58-212ENST00000481980 Q3C1V9 767 aa20.38■□□□□ 0.85
NUP58-212ENST00000481980 TMED8Q6PL24 325 aaPredicted RBP20.38■□□□□ 0.85
NUP58-212ENST00000481980 TRMT44Q8IYL2 757 aaKnown RBP20.38■□□□□ 0.85
NUP58-212ENST00000481980 NBPF3Q9H094 633 aa20.38■□□□□ 0.85
NUP58-212ENST00000481980 STAP2Q9UGK3 403 aa20.38■□□□□ 0.85
NUP58-212ENST00000481980 OGDHLQ9ULD0 1010 aa20.38■□□□□ 0.85
NUP58-212ENST00000481980 PLXNB2O15031 1838 aa20.38■□□□□ 0.85
NUP58-212ENST00000481980 PRKAR2AP13861 404 aaKnown RBP20.37■□□□□ 0.85
NUP58-212ENST00000481980 MNX1P50219 401 aaPredicted RBP20.37■□□□□ 0.85
NUP58-212ENST00000481980 MAP3K12Q12852 859 aa20.37■□□□□ 0.85
NUP58-212ENST00000481980 CEP85Q6P2H3 762 aa20.37■□□□□ 0.85
NUP58-212ENST00000481980 POTEEQ6S8J3 1075 aa20.37■□□□□ 0.85
NUP58-212ENST00000481980 CCAR1Q8IX12 1150 aaKnown RBP20.37■□□□□ 0.85
NUP58-212ENST00000481980 USP6NLQ92738 828 aa20.37■□□□□ 0.85
NUP58-212ENST00000481980 PAGR1Q9BTK6 254 aa20.37■□□□□ 0.85
NUP58-212ENST00000481980 EHD4Q9H223 541 aa20.37■□□□□ 0.85
NUP58-212ENST00000481980 ANTXR1Q9H6X2 564 aa20.37■□□□□ 0.85
NUP58-212ENST00000481980 SERPINB13Q9UIV8 391 aa20.37■□□□□ 0.85
NUP58-212ENST00000481980 NDUFB9Q9Y6M9 179 aa20.37■□□□□ 0.85
NUP58-212ENST00000481980 TTC6Q86TZ1 520 aa20.36■□□□□ 0.85
NUP58-212ENST00000481980 ERC1Q8IUD2 1116 aa20.36■□□□□ 0.85
NUP58-212ENST00000481980 C12orf42Q96LP6 360 aa20.36■□□□□ 0.85
NUP58-212ENST00000481980 PORCNQ9H237 461 aa20.36■□□□□ 0.85
NUP58-212ENST00000481980 USP17L15C9J2P7 530 aa20.35■□□□□ 0.85
NUP58-212ENST00000481980 USP17L13C9JLJ4 530 aa20.35■□□□□ 0.85
NUP58-212ENST00000481980 USP17L11C9JVI0 530 aa20.35■□□□□ 0.85
NUP58-212ENST00000481980 USP17L18D6R9N7 530 aa20.35■□□□□ 0.85
NUP58-212ENST00000481980 USP17L22D6RA61 530 aa20.35■□□□□ 0.85
NUP58-212ENST00000481980 USP17L17D6RBQ6 530 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms