RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 SEC23AQ15436 765 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 MAP3K11Q16584 847 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 NIM1KQ8IY84 436 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 FAM43AQ8N2R8 423 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 KCNG4Q8TDN1 519 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 FHDC1Q9C0D6 1143 aaPredicted RBP18.29■□□□□ 0.52
RXRA-202ENST00000481739 INCENPQ9NQS7 918 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.29■□□□□ 0.525e-6■■■■■ 28.5
RXRA-202ENST00000481739 TNKSO95271 1327 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 FER1L6Q2WGJ9 1857 aa18.29■□□□□ 0.52
RXRA-202ENST00000481739 USP17L12C9JPN9 530 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 USP17L21D6R901 530 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 GUCY1B3Q02153 619 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 KIF23Q02241 960 aaPredicted RBP18.28■□□□□ 0.52
RXRA-202ENST00000481739 PDE4BQ07343 736 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 KIAA0825Q8IV33 1275 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 AMOTL1Q8IY63 956 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 ZNF654Q8IZM8 581 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 PGBD1Q96JS3 809 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 USP28Q96RU2 1077 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 ZSCAN10Q96SZ4 725 aaPredicted RBP18.28■□□□□ 0.52
RXRA-202ENST00000481739 SENP2Q9HC62 589 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 BAZ2AQ9UIF9 1905 aaKnown RBP18.28■□□□□ 0.52
RXRA-202ENST00000481739 LAMB1P07942 1786 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 GPR75-ASB3A0A0A6YYF3 556 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 FOSBP53539 338 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 FKBP1AP62942 108 aaKnown RBP18.28■□□□□ 0.52
RXRA-202ENST00000481739 MYSM1Q5VVJ2 828 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 RBM43Q6ZSC3 357 aaKnown RBP18.28■□□□□ 0.52
RXRA-202ENST00000481739 FAM163AQ96GL9 167 aaPredicted RBP18.28■□□□□ 0.52
RXRA-202ENST00000481739 PDLIM2Q96JY6 352 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 FUCA2Q9BTY2 467 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 CLSTN2Q9H4D0 955 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 DACT1Q9NYF0 836 aa18.28■□□□□ 0.52
RXRA-202ENST00000481739 CTAGE5O15320 804 aa18.27■□□□□ 0.52
RXRA-202ENST00000481739 RAD17O75943 681 aa18.27■□□□□ 0.52
RXRA-202ENST00000481739 PLCG2P16885 1265 aa18.27■□□□□ 0.52
RXRA-202ENST00000481739 LIG1P18858 919 aa18.27■□□□□ 0.52
RXRA-202ENST00000481739 HS1BP3Q53T59 392 aa18.27■□□□□ 0.52
RXRA-202ENST00000481739 RAB11FIP4Q86YS3 637 aa18.27■□□□□ 0.52
RXRA-202ENST00000481739 STK11IPQ8N1F8 1099 aa18.27■□□□□ 0.52
RXRA-202ENST00000481739 FANCBQ8NB91 859 aa18.27■□□□□ 0.52
RXRA-202ENST00000481739 RBM28Q9NW13 759 aaKnown RBP18.27■□□□□ 0.52
RXRA-202ENST00000481739 DAGLAQ9Y4D2 1042 aa18.27■□□□□ 0.52
RXRA-202ENST00000481739 GAKO14976 1311 aa18.27■□□□□ 0.51
RXRA-202ENST00000481739 A0A1W2PQ27 194 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 A0A1W2PQ64 194 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 A0A1W2PQD8 194 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 NFKBIEO00221 500 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 DDAH1O94760 285 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 DEXIO95424 95 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 CATIPQ7Z7H3 387 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 TEX11Q8IYF3 940 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 JDP2Q8WYK2 163 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 TEKT1Q969V4 418 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 TNMDQ9H2S6 317 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 ZNRF3Q9ULT6 936 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 ROBO3Q96MS0 1386 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 RANBP6O60518 1105 aaKnown RBP18.26■□□□□ 0.51
RXRA-202ENST00000481739 RXRAP19793 462 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 RBM5P52756 815 aaKnown RBP eCLIP18.26■□□□□ 0.512e-6■■■□□ 18.1
RXRA-202ENST00000481739 CCDC178Q5BJE1 867 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 IFIT1BQ5T764 474 aaKnown RBP18.26■□□□□ 0.51
RXRA-202ENST00000481739 KRT40Q6A162 431 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 CCDC73Q6ZRK6 1079 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 TGFBRAP1Q8WUH2 860 aa18.26■□□□□ 0.51
RXRA-202ENST00000481739 RNF26Q9BY78 433 aaPredicted RBP18.26■□□□□ 0.51
RXRA-202ENST00000481739 ARFGEF1Q9Y6D6 1849 aa18.25■□□□□ 0.51
RXRA-202ENST00000481739 CAVIN2O95810 425 aa18.25■□□□□ 0.51
RXRA-202ENST00000481739 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.51
RXRA-202ENST00000481739 RASSF7Q02833 373 aa18.25■□□□□ 0.51
RXRA-202ENST00000481739 SAFBQ15424 915 aaKnown RBP eCLIP18.25■□□□□ 0.51
RXRA-202ENST00000481739 ADALQ6DHV7 355 aa18.25■□□□□ 0.51
RXRA-202ENST00000481739 ENAHQ8N8S7 591 aaPredicted RBP18.25■□□□□ 0.51
RXRA-202ENST00000481739 LINC00301Q8NCQ3 95 aa18.25■□□□□ 0.51
RXRA-202ENST00000481739 MYL10Q9BUA6 226 aa18.25■□□□□ 0.51
RXRA-202ENST00000481739 SLC26A6Q9BXS9 759 aa18.25■□□□□ 0.51
RXRA-202ENST00000481739 MKRN1Q9UHC7 482 aaKnown RBP18.25■□□□□ 0.51
RXRA-202ENST00000481739 COL4A5P29400 1685 aa18.25■□□□□ 0.51
RXRA-202ENST00000481739 CYP2D7A0A087X1C5 515 aa18.24■□□□□ 0.51
RXRA-202ENST00000481739 PSMD14O00487 310 aa18.24■□□□□ 0.51
RXRA-202ENST00000481739 PPFIA3O75145 1194 aa18.24■□□□□ 0.51
RXRA-202ENST00000481739 CRKP46108 304 aa18.24■□□□□ 0.51
RXRA-202ENST00000481739 ME1P48163 572 aa18.24■□□□□ 0.51
RXRA-202ENST00000481739 GNL2Q13823 731 aaKnown RBP18.24■□□□□ 0.51
RXRA-202ENST00000481739 HHIPL2Q6UWX4 724 aa18.24■□□□□ 0.51
RXRA-202ENST00000481739 MAPKAPK5Q8IW41 473 aa18.24■□□□□ 0.51
RXRA-202ENST00000481739 CRACR2BQ8N4Y2 399 aaPredicted RBP18.24■□□□□ 0.51
RXRA-202ENST00000481739 PHKBQ93100 1093 aa18.24■□□□□ 0.51
RXRA-202ENST00000481739 ZKSCAN3Q9BRR0 538 aa18.24■□□□□ 0.51
RXRA-202ENST00000481739 ZNF287Q9HBT7 754 aa18.24■□□□□ 0.51
RXRA-202ENST00000481739 MCM9Q9NXL9 1143 aa18.24■□□□□ 0.51
RXRA-202ENST00000481739 ZNF646O15015 1829 aaPredicted RBP18.24■□□□□ 0.51
RXRA-202ENST00000481739 XBP1P17861 261 aa18.23■□□□□ 0.51
RXRA-202ENST00000481739 STK38Q15208 465 aa18.23■□□□□ 0.51
RXRA-202ENST00000481739 OTUD7BQ6GQQ9 843 aa18.23■□□□□ 0.51
RXRA-202ENST00000481739 RSBN1LQ6PCB5 846 aaPredicted RBP18.23■□□□□ 0.51
RXRA-202ENST00000481739 CCDC144CPQ8IYA2 1237 aa18.23■□□□□ 0.51
RXRA-202ENST00000481739 JMYQ8N9B5 988 aa18.23■□□□□ 0.51
RXRA-202ENST00000481739 PSME4Q14997 1843 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms