RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 TREML2Q5T2D2 321 aa10.85□□□□□ -0.67
LINC00544-202ENST00000481738 KBTBD3Q8NAB2 608 aa10.85□□□□□ -0.67
LINC00544-202ENST00000481738 EXOC6Q8TAG9 804 aa10.85□□□□□ -0.67
LINC00544-202ENST00000481738 GCC1Q96CN9 775 aa10.85□□□□□ -0.67
LINC00544-202ENST00000481738 ARHGAP39Q9C0H5 1083 aa10.85□□□□□ -0.67
LINC00544-202ENST00000481738 DCP1AQ9NPI6 582 aaPredicted RBP10.85□□□□□ -0.67
LINC00544-202ENST00000481738 GINM1Q9NU53 330 aa10.85□□□□□ -0.67
LINC00544-202ENST00000481738 AGTPBP1Q9UPW5 1226 aa10.85□□□□□ -0.67
LINC00544-202ENST00000481738 PTPN22Q9Y2R2 807 aa10.85□□□□□ -0.67
LINC00544-202ENST00000481738 SUPT16HQ9Y5B9 1047 aaKnown RBP10.85□□□□□ -0.67
LINC00544-202ENST00000481738 ZSWIM8A7E2V4 1837 aa10.85□□□□□ -0.67
LINC00544-202ENST00000481738 ERC2O15083 957 aa10.84□□□□□ -0.67
LINC00544-202ENST00000481738 GH2P01242 217 aa10.84□□□□□ -0.67
LINC00544-202ENST00000481738 CYP2D6P10635 497 aa10.84□□□□□ -0.67
LINC00544-202ENST00000481738 MX1P20591 662 aa10.84□□□□□ -0.67
LINC00544-202ENST00000481738 SOX10P56693 466 aa10.84□□□□□ -0.67
LINC00544-202ENST00000481738 MTMR2Q13614 643 aa10.84□□□□□ -0.67
LINC00544-202ENST00000481738 AAMPQ13685 434 aa10.84□□□□□ -0.67
LINC00544-202ENST00000481738 SH3D19Q5HYK7 790 aa10.84□□□□□ -0.67
LINC00544-202ENST00000481738 TATDN1Q6P1N9 297 aa10.84□□□□□ -0.67
LINC00544-202ENST00000481738 PROCA1Q8NCQ7 364 aaPredicted RBP10.84□□□□□ -0.67
LINC00544-202ENST00000481738 PI4K2BQ8TCG2 481 aa10.84□□□□□ -0.67
LINC00544-202ENST00000481738 WDR18Q9BV38 432 aa10.84□□□□□ -0.67
LINC00544-202ENST00000481738 PUS7LQ9H0K6 701 aaKnown RBP10.84□□□□□ -0.67
LINC00544-202ENST00000481738 SLC45A1Q9Y2W3 748 aa10.84□□□□□ -0.67
LINC00544-202ENST00000481738 LOC285556D6RIA3 1793 aa10.83□□□□□ -0.68
LINC00544-202ENST00000481738 RNF113AO15541 343 aaKnown RBP10.83□□□□□ -0.68
LINC00544-202ENST00000481738 GLRX3O76003 335 aaKnown RBP10.83□□□□□ -0.68
LINC00544-202ENST00000481738 BCRP11274 1271 aa10.83□□□□□ -0.68
LINC00544-202ENST00000481738 SHMT1P34896 483 aa10.83□□□□□ -0.68
LINC00544-202ENST00000481738 BACE1P56817 501 aa10.83□□□□□ -0.68
LINC00544-202ENST00000481738 GABPAQ06546 454 aa10.83□□□□□ -0.68
LINC00544-202ENST00000481738 ABCB5Q2M3G0 1257 aa10.83□□□□□ -0.68
LINC00544-202ENST00000481738 CERKLQ49MI3 558 aaPredicted RBP10.83□□□□□ -0.68
LINC00544-202ENST00000481738 SMCR8Q8TEV9 937 aaPredicted RBP10.83□□□□□ -0.68
LINC00544-202ENST00000481738 APPBP2Q92624 585 aa10.83□□□□□ -0.68
LINC00544-202ENST00000481738 CABP5Q9NP86 173 aa10.83□□□□□ -0.68
LINC00544-202ENST00000481738 ATP8A2Q9NTI2 1148 aa10.83□□□□□ -0.68
LINC00544-202ENST00000481738 TMOD4Q9NZQ9 345 aa10.83□□□□□ -0.68
LINC00544-202ENST00000481738 SLC4A4Q9Y6R1 1079 aa10.83□□□□□ -0.68
LINC00544-202ENST00000481738 SALL3Q9BXA9 1300 aa10.83□□□□□ -0.68
LINC00544-202ENST00000481738 BAZ2AQ9UIF9 1905 aaKnown RBP10.82□□□□□ -0.68
LINC00544-202ENST00000481738 CYP2D7A0A087X1C5 515 aa10.82□□□□□ -0.68
LINC00544-202ENST00000481738 C19orf81C9J6K1 198 aa10.82□□□□□ -0.68
LINC00544-202ENST00000481738 USP17L10C9JJH3 530 aa10.82□□□□□ -0.68
LINC00544-202ENST00000481738 OSBPP22059 807 aa10.82□□□□□ -0.68
LINC00544-202ENST00000481738 CTGFP29279 349 aa10.82□□□□□ -0.68
LINC00544-202ENST00000481738 PSMC4P43686 418 aa10.82□□□□□ -0.68
LINC00544-202ENST00000481738 PABPC4Q13310 644 aaKnown RBP eCLIP10.82□□□□□ -0.68
LINC00544-202ENST00000481738 RAB3GAP1Q15042 981 aa10.82□□□□□ -0.68
LINC00544-202ENST00000481738 SLC44A5Q8NCS7 719 aa10.82□□□□□ -0.68
LINC00544-202ENST00000481738 OSBP2Q969R2 916 aa10.82□□□□□ -0.68
LINC00544-202ENST00000481738 DYNLL2Q96FJ2 89 aa10.82□□□□□ -0.68
LINC00544-202ENST00000481738 DDRGK1Q96HY6 314 aa10.82□□□□□ -0.68
LINC00544-202ENST00000481738 RWDD1Q9H446 243 aaPredicted RBP10.82□□□□□ -0.68
LINC00544-202ENST00000481738 PNMA3Q9UL41 463 aa10.82□□□□□ -0.68
LINC00544-202ENST00000481738 PTCH2Q9Y6C5 1203 aa10.82□□□□□ -0.68
LINC00544-202ENST00000481738 USP17L12C9JPN9 530 aa10.81□□□□□ -0.68
LINC00544-202ENST00000481738 USP17L21D6R901 530 aa10.81□□□□□ -0.68
LINC00544-202ENST00000481738 SMIM22K7EJ46 135 aa10.81□□□□□ -0.68
LINC00544-202ENST00000481738 MPHOSPH10O00566 681 aaKnown RBP10.81□□□□□ -0.68
LINC00544-202ENST00000481738 FMNL1O95466 1100 aaPredicted RBP10.81□□□□□ -0.68
LINC00544-202ENST00000481738 IGHDP01880 384 aa10.81□□□□□ -0.68
LINC00544-202ENST00000481738 ZFYP08048 801 aaPredicted RBP10.81□□□□□ -0.68
LINC00544-202ENST00000481738 RGS19P49795 217 aa10.81□□□□□ -0.68
LINC00544-202ENST00000481738 LRRFIP1Q32MZ4 808 aaKnown RBP10.81□□□□□ -0.68
LINC00544-202ENST00000481738 C12orf60Q5U649 245 aa10.81□□□□□ -0.68
LINC00544-202ENST00000481738 B4GALNT3Q6L9W6 998 aa10.81□□□□□ -0.68
LINC00544-202ENST00000481738 AMOTL1Q8IY63 956 aa10.81□□□□□ -0.68
LINC00544-202ENST00000481738 TRIM47Q96LD4 638 aa10.81□□□□□ -0.68
LINC00544-202ENST00000481738 STRBPQ96SI9 672 aaKnown RBP10.81□□□□□ -0.68
LINC00544-202ENST00000481738 FEZ1Q99689 392 aa10.81□□□□□ -0.68
LINC00544-202ENST00000481738 FSD1Q9BTV5 496 aa10.81□□□□□ -0.68
LINC00544-202ENST00000481738 LNPKQ9C0E8 428 aa10.81□□□□□ -0.68
LINC00544-202ENST00000481738 ASCC2Q9H1I8 757 aaPredicted RBP10.81□□□□□ -0.68
LINC00544-202ENST00000481738 SWAP70Q9UH65 585 aa10.81□□□□□ -0.68
LINC00544-202ENST00000481738 M0R2C6 588 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 GPAA1O43292 621 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 GNRH1P01148 92 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 HOXD10P28358 340 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 GUCY1A2P33402 732 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 PDE1AP54750 535 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 PRMT2P55345 433 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 FCGRTP55899 365 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 IRX3P78415 501 aaPredicted RBP10.8□□□□□ -0.68
LINC00544-202ENST00000481738 SEPT2Q15019 361 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 ZYXQ15942 572 aaKnown RBP10.8□□□□□ -0.68
LINC00544-202ENST00000481738 CTR9Q6PD62 1173 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 USP17L2Q6R6M4 530 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 SMC5Q8IY18 1101 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 ANKRD13CQ8N6S4 541 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 ACER1Q8TDN7 264 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 EMILIN3Q9NT22 766 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 SRRDQ9UH36 339 aa10.8□□□□□ -0.68
LINC00544-202ENST00000481738 MGAMO43451 1857 aa10.79□□□□□ -0.68
LINC00544-202ENST00000481738 GSG1L2A8MUP6 293 aa10.79□□□□□ -0.68
LINC00544-202ENST00000481738 HOXA7P31268 230 aaPredicted RBP10.79□□□□□ -0.68
LINC00544-202ENST00000481738 GCLCP48506 637 aaPredicted RBP10.79□□□□□ -0.68
LINC00544-202ENST00000481738 CDK8P49336 464 aa10.79□□□□□ -0.68
LINC00544-202ENST00000481738 IRX6P78412 446 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms