RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 TM4SF20Q53R12 229 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 C2orf27AQ580R0 203 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 TRIM67Q6ZTA4 783 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 KIAA0825Q8IV33 1275 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 ESYT1Q9BSJ8 1104 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 TRIM55Q9BYV6 548 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 NPHS2Q9NP85 383 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 TAGLN3Q9UI15 199 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 USP20Q9Y2K6 914 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 FBXO24O75426 580 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 TNFRSF21O75509 655 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 STAT3P40763 770 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 TRIP4Q15650 581 aaPredicted RBP4.32□□□□□ -1.72
SMC6-208ENST00000481708 ARSHQ5FYA8 562 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 PCNX4Q63HM2 1172 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 CCSAPQ6IQ19 270 aaPredicted RBP4.32□□□□□ -1.72
SMC6-208ENST00000481708 C16orf86Q6ZW13 317 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 VPS37DQ86XT2 251 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 GPATCH11Q8N954 259 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 CCDC74AQ96AQ1 378 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 MYO19Q96H55 970 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 CCDC8Q9H0W5 538 aaPredicted RBP4.32□□□□□ -1.72
SMC6-208ENST00000481708 PRKAG3Q9UGI9 489 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 INTUQ9ULD6 942 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 SPATA31A3Q5VYP0 1347 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 KANK1Q14678 1352 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 GDF9O60383 454 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 CLN3Q13286 438 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 MTMR1Q13613 665 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 GALEQ14376 348 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 TLR1Q15399 786 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 TTC8Q8TAM2 541 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 PGPEP1Q9NXJ5 209 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 TCEAL9Q9UHQ7 104 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 MINDY4BA8MYZ0 360 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 EML1O00423 815 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 IRS4O14654 1257 aaPredicted RBP4.31□□□□□ -1.72
SMC6-208ENST00000481708 AKAP10O43572 662 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 ZIC2O95409 532 aaPredicted RBP4.31□□□□□ -1.72
SMC6-208ENST00000481708 ASMTLO95671 621 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 EYA4O95677 639 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 TIMP2P16035 220 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 GRNP28799 593 aaKnown RBP4.31□□□□□ -1.72
SMC6-208ENST00000481708 FAM160A1Q05DH4 1040 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 ZNF296Q8WUU4 475 aaPredicted RBP4.31□□□□□ -1.72
SMC6-208ENST00000481708 SCYL1Q96KG9 808 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 C19orf44Q9H6X5 657 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 ZIM2Q9NZV7 527 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 MAPK8IP1Q9UQF2 711 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 TRPM7Q96QT4 1865 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 KCPQ6ZWJ8 1503 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 TNFRSF10AO00220 468 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 GREM1O60565 184 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 VPS72Q15906 364 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 ESCO1Q5FWF5 840 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 STAG2Q8N3U4 1231 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 AFAP1L2Q8N4X5 818 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 OSGEPQ9NPF4 335 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 PFDN2Q9UHV9 154 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 PARP3Q9Y6F1 533 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 EIF3AQ14152 1382 aaKnown RBP4.31□□□□□ -1.72
SMC6-208ENST00000481708 A0A0G2JS52 829 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 ZNF395Q9H8N7 513 aaPredicted RBP4.31□□□□□ -1.72
SMC6-208ENST00000481708 ARHGEF10O15013 1369 aa4.31□□□□□ -1.72
SMC6-208ENST00000481708 POTECB2RU33 542 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 CDK2AP1O14519 115 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 PSMA6P60900 246 aaKnown RBP4.3□□□□□ -1.72
SMC6-208ENST00000481708 CENPCQ03188 943 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 LMOD3Q0VAK6 560 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 PPP2R5AQ15172 486 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 PRPF40BQ6NWY9 871 aaKnown RBP4.3□□□□□ -1.72
SMC6-208ENST00000481708 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.3□□□□□ -1.72
SMC6-208ENST00000481708 HOMER1Q86YM7 354 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 FBXO27Q8NI29 283 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 SNIP1Q8TAD8 396 aaKnown RBP4.3□□□□□ -1.72
SMC6-208ENST00000481708 GPR152Q8TDT2 470 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 C7orf43Q8WVR3 580 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 CCDC113Q9H0I3 377 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 TOR4AQ9NXH8 423 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 CFDP1Q9UEE9 299 aaPredicted RBP4.3□□□□□ -1.72
SMC6-208ENST00000481708 WASF2Q9Y6W5 498 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 ZNF609O15014 1411 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 SMPD1P17405 629 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 EIF4A3P38919 411 aaKnown RBP4.3□□□□□ -1.72
SMC6-208ENST00000481708 RELBQ01201 579 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 DGKZQ13574 1117 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 CCAR1Q8IX12 1150 aaKnown RBP4.3□□□□□ -1.72
SMC6-208ENST00000481708 TIFAQ96CG3 184 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 BCL11AQ9H165 835 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 FBXO9Q9UK97 447 aaPredicted RBP4.3□□□□□ -1.72
SMC6-208ENST00000481708 SPG7Q9UQ90 795 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 POLR3DP05423 398 aaPredicted RBP4.3□□□□□ -1.72
SMC6-208ENST00000481708 SERPINB3P29508 390 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 PTGIRP43119 386 aa4.3□□□□□ -1.72
SMC6-208ENST00000481708 WDR4P57081 412 aaKnown RBP4.3□□□□□ -1.72
SMC6-208ENST00000481708 SETQ01105 290 aaPredicted RBP4.3□□□□□ -1.72
SMC6-208ENST00000481708 PNISRQ8TF01 805 aaKnown RBP4.3□□□□□ -1.72
SMC6-208ENST00000481708 BSDC1Q9NW68 430 aaPredicted RBP4.3□□□□□ -1.72
SMC6-208ENST00000481708 PDPK1O15530 556 aa4.29□□□□□ -1.72
SMC6-208ENST00000481708 PGRP06401 933 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms