RNA–Protein interactions for RNA: ENST00000481460.1

TRAPPC10-209, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-209ENST00000481460 PARP9Q8IXQ6 854 aa6.78□□□□□ -1.32
TRAPPC10-209ENST00000481460 ATOH1Q92858 354 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC10-209ENST00000481460 SECISBP2LQ93073 1101 aaKnown RBP6.78□□□□□ -1.32
TRAPPC10-209ENST00000481460 EYA3Q99504 573 aa6.78□□□□□ -1.32
TRAPPC10-209ENST00000481460 DLL3Q9NYJ7 618 aa6.78□□□□□ -1.32
TRAPPC10-209ENST00000481460 FRYQ5TBA9 3013 aa6.78□□□□□ -1.32
TRAPPC10-209ENST00000481460 FRMPD3Q5JV73 1810 aa6.78□□□□□ -1.32
TRAPPC10-209ENST00000481460 SPDYE5A6NIY4 337 aa6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 CLGNO14967 610 aa6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 NTSR2O95665 410 aa6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 GRAPQ13588 217 aa6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 SKIV2LQ15477 1246 aaKnown RBP6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 RASIP1Q5U651 963 aa6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 LAPTM4BQ86VI4 370 aa6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 GRAPLQ8TC17 118 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 PNNQ9H307 717 aaKnown RBP6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 TMEM134Q9H6X4 195 aa6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 MTCH2Q9Y6C9 303 aa6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 KIF20BQ96Q89 1820 aa6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 SPEGQ15772 3267 aa6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 ANKRD17O75179 2603 aaKnown RBP6.77□□□□□ -1.33
TRAPPC10-209ENST00000481460 OTOGLQ3ZCN5 2332 aa6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 IRS1P35568 1242 aa6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 TNNT2P45379 298 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 RGS3P49796 1198 aa6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 RTP1P59025 263 aa6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 SLC20A2Q08357 652 aa6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 SNAPC2Q13487 334 aa6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 NBPF12Q5TAG4 269 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 SUSD4Q5VX71 490 aa6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 TICAM2Q86XR7 235 aa6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 TTC5Q8N0Z6 440 aa6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 OGFOD1Q8N543 542 aa6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 FSD1Q9BTV5 496 aa6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 NSFL1CQ9UNZ2 370 aaKnown RBP6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 ZNF804BA4D1E1 1349 aa6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 UBN2Q6ZU65 1347 aa6.76□□□□□ -1.33
TRAPPC10-209ENST00000481460 CEMIPQ8WUJ3 1361 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 TRIM43BA6NCK2 446 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 USP17L3A6NCW0 530 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 USP17L4A6NCW7 530 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 ERVV-1B6SEH8 477 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 C6orf229H3BNL8 230 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 SASH1O94885 1247 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 KIF20AO95235 890 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 SSTR3P32745 418 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 TRIM32Q13049 653 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 VGLL4Q14135 290 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 NEUROD2Q15784 382 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 AXDND1Q5T1B0 1012 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 ZNF790Q6PG37 636 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 USP17L1Q7RTZ2 530 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 ADSSL1Q8N142 457 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 MRPL50Q8N5N7 158 aaKnown RBP6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 RGS22Q8NE09 1264 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 TBC1D16Q8TBP0 767 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 TRIM43Q96BQ3 446 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 ZC3H12CQ9C0D7 883 aaKnown RBP6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 SENP6Q9GZR1 1112 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 KDM4CQ9H3R0 1056 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 GPCPD1Q9NPB8 672 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 PDLIM7Q9NR12 457 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 TMEM51Q9NW97 253 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 KCNH4Q9UQ05 1017 aa6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 CNOT1A5YKK6 2376 aaKnown RBP6.75□□□□□ -1.33
TRAPPC10-209ENST00000481460 SIPA1L3O60292 1781 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 SMG1Q96Q15 3661 aaKnown RBP6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 PDHXO00330 501 aa6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 TNPO2O14787 897 aaKnown RBP6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 PTMAP06454 111 aaKnown RBP6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 PTMSP20962 102 aa6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 SNX17Q15036 470 aa6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 RAB30Q15771 203 aa6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 L1TD1Q5T7N2 865 aaKnown RBP6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 ERO1BQ86YB8 467 aa6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 ZNF34Q8IZ26 560 aa6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 MICALL1Q8N3F8 863 aa6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 ZFRQ96KR1 1074 aaKnown RBP6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 USP16Q9Y5T5 823 aa6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 MYO3BQ8WXR4 1341 aa6.74□□□□□ -1.33
TRAPPC10-209ENST00000481460 PLXNB2O15031 1838 aa6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 GRXCR1A8MXD5 290 aa6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 ZIC2O95409 532 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 MS4A1P11836 297 aa6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 PIP4K2AP48426 406 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 GPSM2P81274 684 aa6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 PPIL2Q13356 520 aa6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 MOGSQ13724 837 aa6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 LEXMQ3ZCV2 418 aa6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 C1orf53Q5VUE5 145 aa6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 GIGYF2Q6Y7W6 1299 aaKnown RBP6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 DDX46Q7L014 1031 aaKnown RBP6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 SH3RF1Q7Z6J0 888 aa6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 FMNL2Q96PY5 1086 aa6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 RRAGDQ9NQL2 400 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 FAM217BQ9NTX9 383 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 POLKQ9UBT6 870 aa6.73□□□□□ -1.33
TRAPPC10-209ENST00000481460 GJD2Q9UKL4 321 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms