RNA–Protein interactions for RNA: ENST00000481278.5

TMCO1-206, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-206ENST00000481278 FAM161BQ96MY7 647 aa13.06□□□□□ -0.32
TMCO1-206ENST00000481278 APBA2Q99767 749 aa13.06□□□□□ -0.32
TMCO1-206ENST00000481278 HERC5Q9UII4 1024 aaKnown RBP13.06□□□□□ -0.32
TMCO1-206ENST00000481278 A0A1B0GUL7 405 aa13.05□□□□□ -0.32
TMCO1-206ENST00000481278 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
TMCO1-206ENST00000481278 MAPK4P31152 587 aa13.05□□□□□ -0.32
TMCO1-206ENST00000481278 TBC1D9Q6ZT07 1266 aa13.05□□□□□ -0.32
TMCO1-206ENST00000481278 SLF2Q8IX21 1173 aa13.05□□□□□ -0.32
TMCO1-206ENST00000481278 TRMT44Q8IYL2 757 aaKnown RBP13.05□□□□□ -0.32
TMCO1-206ENST00000481278 TRPV1Q8NER1 839 aa13.05□□□□□ -0.32
TMCO1-206ENST00000481278 CDX2Q99626 313 aaPredicted RBP13.05□□□□□ -0.32
TMCO1-206ENST00000481278 TTYH1Q9H313 450 aaPredicted RBP13.05□□□□□ -0.32
TMCO1-206ENST00000481278 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
TMCO1-206ENST00000481278 ARID4AP29374 1257 aaPredicted RBP13.04□□□□□ -0.32
TMCO1-206ENST00000481278 SPTY2D1Q68D10 685 aaPredicted RBP13.04□□□□□ -0.32
TMCO1-206ENST00000481278 ERICH6Q7L0X2 663 aa13.04□□□□□ -0.32
TMCO1-206ENST00000481278 SH3RF3Q8TEJ3 882 aaPredicted RBP13.04□□□□□ -0.32
TMCO1-206ENST00000481278 PRDM6Q9NQX0 595 aa13.04□□□□□ -0.32
TMCO1-206ENST00000481278 UBTFL1P0CB47 393 aaPredicted RBP13.03□□□□□ -0.32
TMCO1-206ENST00000481278 RGS2P41220 211 aa13.03□□□□□ -0.32
TMCO1-206ENST00000481278 IRX3P78415 501 aaPredicted RBP13.03□□□□□ -0.32
TMCO1-206ENST00000481278 TFCP2Q12800 502 aa13.03□□□□□ -0.32
TMCO1-206ENST00000481278 C9orf50Q5SZB4 431 aa13.03□□□□□ -0.32
TMCO1-206ENST00000481278 PLEKHH3Q7Z736 793 aa13.03□□□□□ -0.32
TMCO1-206ENST00000481278 ADGRA1Q86SQ6 560 aa13.03□□□□□ -0.32
TMCO1-206ENST00000481278 C12orf42Q96LP6 360 aa13.03□□□□□ -0.32
TMCO1-206ENST00000481278 MEIS3Q99687 375 aa13.03□□□□□ -0.32
TMCO1-206ENST00000481278 SEMA6BQ9H3T3 888 aa13.03□□□□□ -0.32
TMCO1-206ENST00000481278 AS3MTQ9HBK9 375 aa13.03□□□□□ -0.32
TMCO1-206ENST00000481278 PI4KBQ9UBF8 816 aa13.03□□□□□ -0.32
TMCO1-206ENST00000481278 C19orf81C9J6K1 198 aa13.02□□□□□ -0.33
TMCO1-206ENST00000481278 ASNSP08243 561 aa13.02□□□□□ -0.33
TMCO1-206ENST00000481278 HOXC6P09630 235 aa13.02□□□□□ -0.33
TMCO1-206ENST00000481278 MCAMP43121 646 aa13.02□□□□□ -0.33
TMCO1-206ENST00000481278 MAP2K5Q13163 448 aa13.02□□□□□ -0.33
TMCO1-206ENST00000481278 MTX1Q13505 466 aa13.02□□□□□ -0.33
TMCO1-206ENST00000481278 SNX17Q15036 470 aa13.02□□□□□ -0.33
TMCO1-206ENST00000481278 SHHQ15465 462 aa13.02□□□□□ -0.33
TMCO1-206ENST00000481278 TEX11Q8IYF3 940 aa13.02□□□□□ -0.33
TMCO1-206ENST00000481278 SPATA5Q8NB90 893 aa13.02□□□□□ -0.33
TMCO1-206ENST00000481278 NPLOC4Q8TAT6 608 aa13.02□□□□□ -0.33
TMCO1-206ENST00000481278 SENP6Q9GZR1 1112 aaPredicted RBP13.02□□□□□ -0.33
TMCO1-206ENST00000481278 ZBTB21Q9ULJ3 1066 aa13.02□□□□□ -0.33
TMCO1-206ENST00000481278 FLT1P17948 1338 aa13.02□□□□□ -0.33
TMCO1-206ENST00000481278 RLFQ13129 1914 aa13.01□□□□□ -0.33
TMCO1-206ENST00000481278 USP17L10C9JJH3 530 aa13.01□□□□□ -0.33
TMCO1-206ENST00000481278 GDF11O95390 407 aa13.01□□□□□ -0.33
TMCO1-206ENST00000481278 RTP1P59025 263 aa13.01□□□□□ -0.33
TMCO1-206ENST00000481278 PPP4CP60510 307 aa13.01□□□□□ -0.33
TMCO1-206ENST00000481278 MVPQ14764 893 aaKnown RBP13.01□□□□□ -0.33
TMCO1-206ENST00000481278 ALDH1L2Q3SY69 923 aa13.01□□□□□ -0.33
TMCO1-206ENST00000481278 MAFAQ8NHW3 353 aaPredicted RBP13.01□□□□□ -0.33
TMCO1-206ENST00000481278 LPAR1Q92633 364 aa13.01□□□□□ -0.33
TMCO1-206ENST00000481278 DDX20Q9UHI6 824 aaKnown RBP13.01□□□□□ -0.33
TMCO1-206ENST00000481278 CDK5RAP2Q96SN8 1893 aa13□□□□□ -0.33
TMCO1-206ENST00000481278 FOCADQ5VW36 1801 aa13□□□□□ -0.33
TMCO1-206ENST00000481278 DNM1LO00429 736 aa13□□□□□ -0.33
TMCO1-206ENST00000481278 CYBAP13498 195 aa13□□□□□ -0.33
TMCO1-206ENST00000481278 ATN1P54259 1190 aaPredicted RBP13□□□□□ -0.33
TMCO1-206ENST00000481278 SLFN5Q08AF3 891 aa13□□□□□ -0.33
TMCO1-206ENST00000481278 PDE3AQ14432 1141 aa13□□□□□ -0.33
TMCO1-206ENST00000481278 GRB14Q14449 540 aa13□□□□□ -0.33
TMCO1-206ENST00000481278 ZNF697Q5TEC3 545 aa13□□□□□ -0.33
TMCO1-206ENST00000481278 LBX2Q6XYB7 198 aa13□□□□□ -0.33
TMCO1-206ENST00000481278 TRMT2AQ8IZ69 625 aaKnown RBP13□□□□□ -0.33
TMCO1-206ENST00000481278 GTF3C2Q8WUA4 911 aaPredicted RBP13□□□□□ -0.33
TMCO1-206ENST00000481278 DHX36Q9H2U1 1008 aaKnown RBP13□□□□□ -0.33
TMCO1-206ENST00000481278 GINM1Q9NU53 330 aa13□□□□□ -0.33
TMCO1-206ENST00000481278 TMOD4Q9NZQ9 345 aa13□□□□□ -0.33
TMCO1-206ENST00000481278 BTBD7Q9P203 1132 aa13□□□□□ -0.33
TMCO1-206ENST00000481278 RABGAP1Q9Y3P9 1069 aa13□□□□□ -0.33
TMCO1-206ENST00000481278 TRIM43BA6NCK2 446 aa12.99□□□□□ -0.33
TMCO1-206ENST00000481278 LDHCP07864 332 aa12.99□□□□□ -0.33
TMCO1-206ENST00000481278 PTPREP23469 700 aa12.99□□□□□ -0.33
TMCO1-206ENST00000481278 GSTO1P78417 241 aa12.99□□□□□ -0.33
TMCO1-206ENST00000481278 MYLIPQ8WY64 445 aa12.99□□□□□ -0.33
TMCO1-206ENST00000481278 TRIM43Q96BQ3 446 aaPredicted RBP12.99□□□□□ -0.33
TMCO1-206ENST00000481278 EDC3Q96F86 508 aaKnown RBP12.99□□□□□ -0.33
TMCO1-206ENST00000481278 PAGR1Q9BTK6 254 aa12.99□□□□□ -0.33
TMCO1-206ENST00000481278 NDUFB9Q9Y6M9 179 aa12.99□□□□□ -0.33
TMCO1-206ENST00000481278 ZNF236Q9UL36 1845 aa12.99□□□□□ -0.33
TMCO1-206ENST00000481278 SLC15A5A6NIM6 579 aa12.98□□□□□ -0.33
TMCO1-206ENST00000481278 E9PSI1 815 aa12.98□□□□□ -0.33
TMCO1-206ENST00000481278 ITGB8P26012 769 aa12.98□□□□□ -0.33
TMCO1-206ENST00000481278 CYP2C19P33261 490 aa12.98□□□□□ -0.33
TMCO1-206ENST00000481278 EPHB4P54760 987 aa12.98□□□□□ -0.33
TMCO1-206ENST00000481278 SMAD3P84022 425 aaKnown RBP12.98□□□□□ -0.33
TMCO1-206ENST00000481278 TATDN1Q6P1N9 297 aa12.98□□□□□ -0.33
TMCO1-206ENST00000481278 SH3RF1Q7Z6J0 888 aa12.98□□□□□ -0.33
TMCO1-206ENST00000481278 FOXP4Q8IVH2 680 aaPredicted RBP12.98□□□□□ -0.33
TMCO1-206ENST00000481278 MAPKAPK5Q8IW41 473 aa12.98□□□□□ -0.33
TMCO1-206ENST00000481278 USP38Q8NB14 1042 aa12.98□□□□□ -0.33
TMCO1-206ENST00000481278 PDLIM7Q9NR12 457 aa12.98□□□□□ -0.33
TMCO1-206ENST00000481278 AATFQ9NY61 560 aaKnown RBP eCLIP12.98□□□□□ -0.33
TMCO1-206ENST00000481278 PALD1Q9ULE6 856 aa12.98□□□□□ -0.33
TMCO1-206ENST00000481278 AKAP2Q9Y2D5 859 aa12.98□□□□□ -0.33
TMCO1-206ENST00000481278 SPDYE16A6NNV3 312 aaPredicted RBP12.97□□□□□ -0.33
TMCO1-206ENST00000481278 USP17L2Q6R6M4 530 aa12.97□□□□□ -0.33
TMCO1-206ENST00000481278 SLC39A5Q6ZMH5 540 aa12.97□□□□□ -0.33
TMCO1-206ENST00000481278 CATSPERGQ6ZRH7 1159 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms