RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 TRIM43BA6NCK2 446 aa11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 DNM1LO00429 736 aa11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 SEMA3EO15041 775 aa11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 ENTPD3O75355 529 aa11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 CNGA1P29973 690 aa11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 RGS2P41220 211 aa11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 IRX3P78415 501 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 TRIM60Q495X7 471 aa11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 MORN1Q5T089 497 aa11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 GJC2Q5T442 439 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 GPR142Q7Z601 462 aa11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 TRMT2AQ8IZ69 625 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 GPRC5AQ8NFJ5 357 aa11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 TRIM43Q96BQ3 446 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 P2RX7Q99572 595 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 IDI2Q9BXS1 227 aa11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 ZNF576Q9H609 170 aa11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 DDX20Q9UHI6 824 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 NOB1Q9ULX3 412 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-210ENST00000481231 GAKO14976 1311 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 ZBTB22O15209 634 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 ITGB8P26012 769 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 MAPK4P31152 587 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 MRPS5P82675 430 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 RASGRF1Q13972 1273 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 CCDC85BQ15834 202 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 CCDC102BQ68D86 513 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 SLC39A5Q6ZMH5 540 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 LPAR1Q92633 364 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 MEIS3Q99687 375 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 PAGR1Q9BTK6 254 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 C1QTNF1Q9BXJ1 281 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 COPRSQ9NQ92 184 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 HCN4Q9Y3Q4 1203 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 NDUFB9Q9Y6M9 179 aa11.68□□□□□ -0.54
SMARCE1-210ENST00000481231 XIRP2A4UGR9 3374 aa11.67□□□□□ -0.54
SMARCE1-210ENST00000481231 MYCNP04198 464 aaPredicted RBP11.67□□□□□ -0.54
SMARCE1-210ENST00000481231 CT47B1P0C2W7 299 aaPredicted RBP11.67□□□□□ -0.54
SMARCE1-210ENST00000481231 HERVK_113P62684 666 aa11.67□□□□□ -0.54
SMARCE1-210ENST00000481231 MTMR2Q13614 643 aa11.67□□□□□ -0.54
SMARCE1-210ENST00000481231 RRP1BQ14684 758 aaKnown RBP11.67□□□□□ -0.54
SMARCE1-210ENST00000481231 Q3C1V9 767 aa11.67□□□□□ -0.54
SMARCE1-210ENST00000481231 CCAR1Q8IX12 1150 aaKnown RBP11.67□□□□□ -0.54
SMARCE1-210ENST00000481231 IL27Q8NEV9 243 aa11.67□□□□□ -0.54
SMARCE1-210ENST00000481231 API5Q9BZZ5 524 aaKnown RBP11.67□□□□□ -0.54
SMARCE1-210ENST00000481231 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.67□□□□□ -0.542e-6■■■■■ 27.2
SMARCE1-210ENST00000481231 RBPJLQ9UBG7 517 aa11.67□□□□□ -0.54
SMARCE1-210ENST00000481231 PDS5AQ29RF7 1337 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 TIMM10P62072 90 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 ERVK-9P63128 1117 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 ERVK-24P63145 666 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 MAP2K5Q13163 448 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 SH3D19Q5HYK7 790 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 MFSD14CQ5VZR4 134 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 ANO1Q5XXA6 986 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 PLEKHH3Q7Z736 793 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 DZIP1Q86YF9 867 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 ZGPATQ8N5A5 531 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 TRPV1Q8NER1 839 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 TIFAQ96CG3 184 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 GAS2L1Q99501 681 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 LRFN3Q9BTN0 628 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 PRDM12Q9H4Q4 367 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 ABCF2Q9UG63 623 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 HDAC5Q9UQL6 1122 aa11.66□□□□□ -0.54
SMARCE1-210ENST00000481231 CYP2C19P33261 490 aa11.65□□□□□ -0.54
SMARCE1-210ENST00000481231 ALYREFQ86V81 257 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-210ENST00000481231 FERMT2Q96AC1 680 aa11.65□□□□□ -0.54
SMARCE1-210ENST00000481231 FAM163AQ96GL9 167 aaPredicted RBP11.65□□□□□ -0.54
SMARCE1-210ENST00000481231 OSBPL5Q9H0X9 879 aaPredicted RBP11.65□□□□□ -0.54
SMARCE1-210ENST00000481231 CWC22Q9HCG8 908 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-210ENST00000481231 MYH13Q9UKX3 1938 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 MROH7-TTC4A0A0A0MT08 1334 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 A0A1B0GUL7 405 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 USP17L5A8MUK1 530 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 KBTBD13C9JR72 458 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 SRGAP3O43295 1099 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 MSCO60682 206 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 CAP2P40123 477 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 PBX2P40425 430 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 BTDP43251 543 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 RARSP54136 660 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 MECOMQ03112 1051 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 TFCP2Q12800 502 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 ADGRE1Q14246 886 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 MVPQ14764 893 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 SNX17Q15036 470 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 AKNAD1Q5T1N1 836 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 SPTY2D1Q68D10 685 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 SLF2Q8IX21 1173 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 ZNF384Q8TF68 577 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 EDC3Q96F86 508 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 XAGE2Q96GT9 111 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 EPHX3Q9H6B9 360 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 RLFQ13129 1914 aa11.64□□□□□ -0.55
SMARCE1-210ENST00000481231 NCOR1O75376 2440 aa11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 GPR75-ASB3A0A0A6YYF3 556 aa11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-210ENST00000481231 TBC1D12O60347 775 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms