RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 BRI3BPQ8WY22 251 aa24.3■■□□□ 1.48
CTSA-206ENST00000480961 TSKSQ9UJT2 592 aa24.3■■□□□ 1.48
CTSA-206ENST00000480961 ZBTB21Q9ULJ3 1066 aa24.3■■□□□ 1.48
CTSA-206ENST00000480961 NAV1Q8NEY1 1877 aa24.3■■□□□ 1.48
CTSA-206ENST00000480961 CCL15-CCL14A0A0B4J2E2 113 aa24.29■■□□□ 1.48
CTSA-206ENST00000480961 TRIM75PA6NK02 468 aa24.29■■□□□ 1.48
CTSA-206ENST00000480961 MPHOSPH10O00566 681 aaKnown RBP24.29■■□□□ 1.48
CTSA-206ENST00000480961 TM4SF4P48230 202 aa24.29■■□□□ 1.48
CTSA-206ENST00000480961 GTF2A2P52657 109 aa24.29■■□□□ 1.48
CTSA-206ENST00000480961 SREBF2Q12772 1141 aa24.29■■□□□ 1.48
CTSA-206ENST00000480961 CCL15Q16663 113 aa24.29■■□□□ 1.48
CTSA-206ENST00000480961 ABCB5Q2M3G0 1257 aa24.29■■□□□ 1.48
CTSA-206ENST00000480961 BMP2KLQ5H9B9 411 aa24.29■■□□□ 1.48
CTSA-206ENST00000480961 PTPN18Q99952 460 aa24.29■■□□□ 1.48
CTSA-206ENST00000480961 BEGAINQ9BUH8 593 aa24.29■■□□□ 1.48
CTSA-206ENST00000480961 SWAP70Q9UH65 585 aa24.29■■□□□ 1.48
CTSA-206ENST00000480961 AFG3L2Q9Y4W6 797 aa24.29■■□□□ 1.48
CTSA-206ENST00000480961 MYH1P12882 1939 aa24.29■■□□□ 1.48
CTSA-206ENST00000480961 DDX60LQ5H9U9 1706 aaKnown RBP24.29■■□□□ 1.48
CTSA-206ENST00000480961 USP17L5A8MUK1 530 aa24.28■■□□□ 1.48
CTSA-206ENST00000480961 TRPA1O75762 1119 aa24.28■■□□□ 1.48
CTSA-206ENST00000480961 FGAP02671 866 aa24.28■■□□□ 1.48
CTSA-206ENST00000480961 ASNSP08243 561 aa24.28■■□□□ 1.48
CTSA-206ENST00000480961 MFAP1P55081 439 aaKnown RBP24.28■■□□□ 1.48
CTSA-206ENST00000480961 SNAPC2Q13487 334 aa24.28■■□□□ 1.48
CTSA-206ENST00000480961 RNF186Q9NXI6 227 aa24.28■■□□□ 1.48
CTSA-206ENST00000480961 IGF2BP3O00425 579 aaKnown RBP eCLIP24.27■■□□□ 1.48
CTSA-206ENST00000480961 FOXN1O15353 648 aa24.27■■□□□ 1.48
CTSA-206ENST00000480961 PRDM1O75626 825 aa24.27■■□□□ 1.48
CTSA-206ENST00000480961 AKR1B1P15121 316 aa24.27■■□□□ 1.48
CTSA-206ENST00000480961 CTDSPL2Q05D32 466 aa24.27■■□□□ 1.48
CTSA-206ENST00000480961 PPARAQ07869 468 aa24.27■■□□□ 1.48
CTSA-206ENST00000480961 SPP2Q13103 211 aa24.27■■□□□ 1.48
CTSA-206ENST00000480961 RAB3GAP1Q15042 981 aa24.27■■□□□ 1.48
CTSA-206ENST00000480961 ALX1Q15699 326 aa24.27■■□□□ 1.48
CTSA-206ENST00000480961 IFNL1Q8IU54 200 aa24.27■■□□□ 1.48
CTSA-206ENST00000480961 INCENPQ9NQS7 918 aa24.27■■□□□ 1.48
CTSA-206ENST00000480961 KCNH4Q9UQ05 1017 aa24.27■■□□□ 1.48
CTSA-206ENST00000480961 CETPP11597 493 aa24.26■■□□□ 1.47
CTSA-206ENST00000480961 REM2Q8IYK8 340 aaPredicted RBP24.26■■□□□ 1.47
CTSA-206ENST00000480961 MKNK2Q9HBH9 465 aa24.26■■□□□ 1.47
CTSA-206ENST00000480961 CABP5Q9NP86 173 aa24.26■■□□□ 1.47
CTSA-206ENST00000480961 THSD7BQ9C0I4 1608 aa24.25■■□□□ 1.47
CTSA-206ENST00000480961 TESPA1A2RU30 521 aaPredicted RBP24.25■■□□□ 1.47
CTSA-206ENST00000480961 CXCL11O14625 94 aa24.25■■□□□ 1.47
CTSA-206ENST00000480961 GUCY1A2P33402 732 aa24.25■■□□□ 1.47
CTSA-206ENST00000480961 INHBEP58166 350 aa24.25■■□□□ 1.47
CTSA-206ENST00000480961 DGKZQ13574 1117 aa24.25■■□□□ 1.47
CTSA-206ENST00000480961 SEPT2Q15019 361 aa24.25■■□□□ 1.47
CTSA-206ENST00000480961 ZNF280CQ8ND82 737 aa24.25■■□□□ 1.47
CTSA-206ENST00000480961 RUFY2Q8WXA3 655 aa24.25■■□□□ 1.47
CTSA-206ENST00000480961 BAZ2AQ9UIF9 1905 aaKnown RBP24.25■■□□□ 1.47
CTSA-206ENST00000480961 HAND2P61296 217 aa24.24■■□□□ 1.47
CTSA-206ENST00000480961 MOGSQ13724 837 aa24.24■■□□□ 1.47
CTSA-206ENST00000480961 TACC3Q9Y6A5 838 aa24.24■■□□□ 1.47
CTSA-206ENST00000480961 BTBD19C9JJ37 291 aa24.23■■□□□ 1.47
CTSA-206ENST00000480961 SGSM2O43147 1006 aa24.23■■□□□ 1.47
CTSA-206ENST00000480961 GADL1Q6ZQY3 521 aa24.23■■□□□ 1.47
CTSA-206ENST00000480961 CLEC10AQ8IUN9 316 aa24.23■■□□□ 1.47
CTSA-206ENST00000480961 FAM43AQ8N2R8 423 aa24.23■■□□□ 1.47
CTSA-206ENST00000480961 AS3MTQ9HBK9 375 aa24.23■■□□□ 1.47
CTSA-206ENST00000480961 GINM1Q9NU53 330 aa24.23■■□□□ 1.47
CTSA-206ENST00000480961 ROBO3Q96MS0 1386 aa24.22■■□□□ 1.47
CTSA-206ENST00000480961 A0A0G2JLL6 359 aaPredicted RBP24.22■■□□□ 1.47
CTSA-206ENST00000480961 TBC1D8O95759 1140 aa24.22■■□□□ 1.47
CTSA-206ENST00000480961 RASA1P20936 1047 aa24.22■■□□□ 1.47
CTSA-206ENST00000480961 PTH1RQ03431 593 aa24.22■■□□□ 1.47
CTSA-206ENST00000480961 PRRT2Q7Z6L0 340 aaPredicted RBP24.22■■□□□ 1.47
CTSA-206ENST00000480961 ACER1Q8TDN7 264 aa24.22■■□□□ 1.47
CTSA-206ENST00000480961 WDR18Q9BV38 432 aa24.22■■□□□ 1.47
CTSA-206ENST00000480961 R3HDMLQ9H3Y0 253 aa24.22■■□□□ 1.47
CTSA-206ENST00000480961 RAD50Q92878 1312 aa24.21■■□□□ 1.47
CTSA-206ENST00000480961 SLC3A2P08195 630 aaKnown RBP24.21■■□□□ 1.47
CTSA-206ENST00000480961 HMGCS2P54868 508 aa24.21■■□□□ 1.47
CTSA-206ENST00000480961 MTMR2Q13614 643 aa24.21■■□□□ 1.47
CTSA-206ENST00000480961 TAOK2Q9UL54 1235 aa24.21■■□□□ 1.47
CTSA-206ENST00000480961 ZYXQ15942 572 aaKnown RBP24.2■■□□□ 1.46
CTSA-206ENST00000480961 FAM47AQ5JRC9 791 aa24.2■■□□□ 1.46
CTSA-206ENST00000480961 GPAT2Q6NUI2 795 aa24.2■■□□□ 1.46
CTSA-206ENST00000480961 TMEM179Q6ZVK1 233 aa24.2■■□□□ 1.46
CTSA-206ENST00000480961 ZNF444Q8N0Y2 327 aaPredicted RBP24.2■■□□□ 1.46
CTSA-206ENST00000480961 CCDC17Q96LX7 622 aa24.2■■□□□ 1.46
CTSA-206ENST00000480961 DSCC1Q9BVC3 393 aa24.2■■□□□ 1.46
CTSA-206ENST00000480961 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.2■■□□□ 1.46
CTSA-206ENST00000480961 ANAPC4Q9UJX5 808 aa24.2■■□□□ 1.46
CTSA-206ENST00000480961 HSPA8P11142 646 aaKnown RBP24.19■■□□□ 1.46
CTSA-206ENST00000480961 PDE4BQ07343 736 aa24.19■■□□□ 1.46
CTSA-206ENST00000480961 OTUD7BQ6GQQ9 843 aa24.19■■□□□ 1.46
CTSA-206ENST00000480961 ESYT1Q9BSJ8 1104 aa24.19■■□□□ 1.46
CTSA-206ENST00000480961 NBPF3Q9H094 633 aa24.19■■□□□ 1.46
CTSA-206ENST00000480961 DOCK1Q14185 1865 aa24.19■■□□□ 1.46
CTSA-206ENST00000480961 USP17L10C9JJH3 530 aa24.18■■□□□ 1.46
CTSA-206ENST00000480961 CA12O43570 354 aa24.18■■□□□ 1.46
CTSA-206ENST00000480961 CDC45O75419 566 aa24.18■■□□□ 1.46
CTSA-206ENST00000480961 CTCFP49711 727 aaPredicted RBP24.18■■□□□ 1.46
CTSA-206ENST00000480961 LBX1P52954 281 aa24.18■■□□□ 1.46
CTSA-206ENST00000480961 BACE1P56817 501 aa24.18■■□□□ 1.46
CTSA-206ENST00000480961 ATP2B2Q01814 1243 aa24.18■■□□□ 1.46
CTSA-206ENST00000480961 TREML2Q5T2D2 321 aa24.18■■□□□ 1.46
CTSA-206ENST00000480961 FASTKD5Q7L8L6 764 aaKnown RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms