RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 ZKSCAN3Q9BRR0 538 aa17.34■□□□□ 0.37
SNRNP200-205ENST00000480835 SLC12A7Q9Y666 1083 aa17.34■□□□□ 0.37
SNRNP200-205ENST00000480835 PLIN4Q96Q06 1357 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 H7C1D1 291 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 WNT10BO00744 389 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 SOCS7O14512 581 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 GRIN3BO60391 1043 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 TSPY3P0CV98 308 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 TSPY8P0CW00 308 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 HMGN5P82970 282 aaKnown RBP17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 TCP10Q12799 353 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 PPP2R5BQ15173 497 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 FAM47AQ5JRC9 791 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 IFIT1BQ5T764 474 aaKnown RBP17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 METTL16Q86W50 562 aaKnown RBP17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 DGKHQ86XP1 1220 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 ENAHQ8N8S7 591 aaPredicted RBP17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 SLC44A5Q8NCS7 719 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 NEDD1Q8NHV4 660 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 ANKS1AQ92625 1134 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 CCDC17Q96LX7 622 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 RNF181Q9P0P0 153 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 HPS5Q9UPZ3 1129 aa17.33■□□□□ 0.36
SNRNP200-205ENST00000480835 CLRN2A0PK11 232 aa17.32■□□□□ 0.36
SNRNP200-205ENST00000480835 CALM1P0DP23 149 aa17.32■□□□□ 0.36
SNRNP200-205ENST00000480835 CALM2P0DP24 149 aa17.32■□□□□ 0.36
SNRNP200-205ENST00000480835 CALM3P0DP25 149 aa17.32■□□□□ 0.36
SNRNP200-205ENST00000480835 GJB2P29033 226 aa17.32■□□□□ 0.36
SNRNP200-205ENST00000480835 TNNI2P48788 182 aa17.32■□□□□ 0.36
SNRNP200-205ENST00000480835 METAP2P50579 478 aaKnown RBP eCLIP17.32■□□□□ 0.368e-8■□□□□ 10.6
SNRNP200-205ENST00000480835 CCT2P78371 535 aaKnown RBP17.32■□□□□ 0.36
SNRNP200-205ENST00000480835 CPLX2Q6PUV4 134 aaKnown RBP17.32■□□□□ 0.36
SNRNP200-205ENST00000480835 ZSCAN29Q8IWY8 852 aaPredicted RBP17.32■□□□□ 0.36
SNRNP200-205ENST00000480835 ZFPM1Q8IX07 1006 aa17.32■□□□□ 0.36
SNRNP200-205ENST00000480835 CRACR2BQ8N4Y2 399 aaPredicted RBP17.32■□□□□ 0.36
SNRNP200-205ENST00000480835 TRIM34Q9BYJ4 488 aa17.32■□□□□ 0.36
SNRNP200-205ENST00000480835 KIF3AQ9Y496 699 aa17.32■□□□□ 0.36
SNRNP200-205ENST00000480835 ZC3H4Q9UPT8 1303 aaKnown RBP17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 DDTLA6NHG4 134 aaPredicted RBP17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 GOLGA8AA7E2F4 631 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 TCP10L2B9ZVM9 353 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 DDAH1O94760 285 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 PDCP20941 246 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 TNFAIP1Q13829 316 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 RAB3GAP1Q15042 981 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 GPR162Q16538 588 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 PPP4R3BQ5MIZ7 849 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 SH3BP5LQ7L8J4 393 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 CATIPQ7Z7H3 387 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 ZNF654Q8IZM8 581 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 NSUN7Q8NE18 718 aaKnown RBP17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 SMARCC2Q8TAQ2 1214 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 SENP2Q9HC62 589 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 GPRC5DQ9NZD1 345 aa17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 GREB1LQ9C091 1923 aaPredicted RBP17.31■□□□□ 0.36
SNRNP200-205ENST00000480835 CCDC196A0A1B0GTZ2 297 aa17.3■□□□□ 0.36
SNRNP200-205ENST00000480835 CPLX1O14810 134 aa17.3■□□□□ 0.36
SNRNP200-205ENST00000480835 CDKL5O76039 1030 aa17.3■□□□□ 0.36
SNRNP200-205ENST00000480835 SHMT1P34896 483 aa17.3■□□□□ 0.36
SNRNP200-205ENST00000480835 KIF4BQ2VIQ3 1234 aa17.3■□□□□ 0.36
SNRNP200-205ENST00000480835 C9orf131Q5VYM1 1079 aa17.3■□□□□ 0.36
SNRNP200-205ENST00000480835 VEZTQ9HBM0 779 aa17.3■□□□□ 0.36
SNRNP200-205ENST00000480835 HERC5Q9UII4 1024 aaKnown RBP17.3■□□□□ 0.36
SNRNP200-205ENST00000480835 CNTNAP1P78357 1384 aa17.29■□□□□ 0.36
SNRNP200-205ENST00000480835 SHTN1A0MZ66 631 aa17.29■□□□□ 0.36
SNRNP200-205ENST00000480835 NBPF9Q3BBW0 867 aa17.29■□□□□ 0.36
SNRNP200-205ENST00000480835 MICU3Q86XE3 530 aa17.29■□□□□ 0.36
SNRNP200-205ENST00000480835 MAP3K14Q99558 947 aa17.29■□□□□ 0.36
SNRNP200-205ENST00000480835 NCOA5Q9HCD5 579 aaKnown RBP17.29■□□□□ 0.36
SNRNP200-205ENST00000480835 IL17RBQ9NRM6 502 aa17.29■□□□□ 0.36
SNRNP200-205ENST00000480835 WDR33Q9C0J8 1336 aaKnown RBP17.28■□□□□ 0.36
SNRNP200-205ENST00000480835 PTPDC1A2A3K4 754 aa17.28■□□□□ 0.36
SNRNP200-205ENST00000480835 CTDNEP1O95476 244 aa17.28■□□□□ 0.36
SNRNP200-205ENST00000480835 NOVP48745 357 aa17.28■□□□□ 0.36
SNRNP200-205ENST00000480835 RTN1Q16799 776 aa17.28■□□□□ 0.36
SNRNP200-205ENST00000480835 RBM26Q5T8P6 1007 aaKnown RBP17.28■□□□□ 0.36
SNRNP200-205ENST00000480835 RCSD1Q6JBY9 416 aa17.28■□□□□ 0.36
SNRNP200-205ENST00000480835 TATDN1Q6P1N9 297 aa17.28■□□□□ 0.36
SNRNP200-205ENST00000480835 CSRNP1Q96S65 589 aa17.28■□□□□ 0.36
SNRNP200-205ENST00000480835 KAT14Q9H8E8 782 aa17.28■□□□□ 0.36
SNRNP200-205ENST00000480835 RBM28Q9NW13 759 aaKnown RBP17.28■□□□□ 0.36
SNRNP200-205ENST00000480835 IGKV6D-41A0A0C4DH26 115 aa17.27■□□□□ 0.36
SNRNP200-205ENST00000480835 TBC1D12O60347 775 aa17.27■□□□□ 0.36
SNRNP200-205ENST00000480835 NMT2O60551 498 aa17.27■□□□□ 0.36
SNRNP200-205ENST00000480835 LMOD1P29536 600 aaPredicted RBP17.27■□□□□ 0.36
SNRNP200-205ENST00000480835 TBC1D10BQ4KMP7 808 aaPredicted RBP17.27■□□□□ 0.36
SNRNP200-205ENST00000480835 SAMD7Q7Z3H4 446 aa17.27■□□□□ 0.36
SNRNP200-205ENST00000480835 FAM184AQ8NB25 1140 aa17.27■□□□□ 0.36
SNRNP200-205ENST00000480835 FANCBQ8NB91 859 aa17.27■□□□□ 0.36
SNRNP200-205ENST00000480835 DNAJC18Q9H819 358 aa17.27■□□□□ 0.36
SNRNP200-205ENST00000480835 STX6O43752 255 aa17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 JAK2O60674 1132 aa17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 BRD1O95696 1058 aa17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 TOP1P11387 765 aaKnown RBP17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 AKR1B1P15121 316 aa17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 SYT1P21579 422 aa17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 TROAPQ12815 778 aa17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 CERKLQ49MI3 558 aaPredicted RBP17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 LARP1BQ659C4 914 aaKnown RBP17.26■□□□□ 0.35
SNRNP200-205ENST00000480835 DPY19L2Q6NUT2 758 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms