RNA–Protein interactions for RNA: ENST00000480807.1

SNX8-208, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 534 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-208ENST00000480807 SLC4A4Q9Y6R1 1079 aa18.6■□□□□ 0.57
SNX8-208ENST00000480807 ZHX2Q9Y6X8 837 aa18.6■□□□□ 0.57
SNX8-208ENST00000480807 FAM196BA6NMK8 535 aa18.59■□□□□ 0.57
SNX8-208ENST00000480807 USP17L5A8MUK1 530 aa18.59■□□□□ 0.57
SNX8-208ENST00000480807 CAP1Q01518 475 aa18.59■□□□□ 0.57
SNX8-208ENST00000480807 PLEKHM2Q8IWE5 1019 aa18.59■□□□□ 0.57
SNX8-208ENST00000480807 STRBPQ96SI9 672 aaKnown RBP18.59■□□□□ 0.57
SNX8-208ENST00000480807 ARPP21Q9UBL0 812 aaPredicted RBP18.59■□□□□ 0.57
SNX8-208ENST00000480807 SWAP70Q9UH65 585 aa18.59■□□□□ 0.57
SNX8-208ENST00000480807 PTPN22Q9Y2R2 807 aa18.59■□□□□ 0.57
SNX8-208ENST00000480807 AFG3L2Q9Y4W6 797 aa18.59■□□□□ 0.57
SNX8-208ENST00000480807 GPAA1O43292 621 aa18.58■□□□□ 0.56
SNX8-208ENST00000480807 TATDN1Q6P1N9 297 aa18.58■□□□□ 0.56
SNX8-208ENST00000480807 OSBP2Q969R2 916 aa18.58■□□□□ 0.56
SNX8-208ENST00000480807 DNAJC18Q9H819 358 aa18.58■□□□□ 0.56
SNX8-208ENST00000480807 A0A0G2JLL6 359 aaPredicted RBP18.57■□□□□ 0.56
SNX8-208ENST00000480807 TRIM6-TRIM34B2RNG4 842 aa18.57■□□□□ 0.56
SNX8-208ENST00000480807 BTBD19C9JJ37 291 aa18.57■□□□□ 0.56
SNX8-208ENST00000480807 CENPBP07199 599 aaPredicted RBP18.57■□□□□ 0.56
SNX8-208ENST00000480807 SLFNL1Q499Z3 407 aa18.57■□□□□ 0.56
SNX8-208ENST00000480807 ZMYM1Q5SVZ6 1142 aa18.57■□□□□ 0.56
SNX8-208ENST00000480807 PRRT2Q7Z6L0 340 aaPredicted RBP18.57■□□□□ 0.56
SNX8-208ENST00000480807 ANKRD23Q86SG2 305 aa18.57■□□□□ 0.56
SNX8-208ENST00000480807 ZNF280CQ8ND82 737 aa18.57■□□□□ 0.56
SNX8-208ENST00000480807 NACAP1Q9BZK3 213 aa18.57■□□□□ 0.56
SNX8-208ENST00000480807 CABP5Q9NP86 173 aa18.57■□□□□ 0.56
SNX8-208ENST00000480807 LOC285556D6RIA3 1793 aa18.57■□□□□ 0.56
SNX8-208ENST00000480807 PDE4DIPQ5VU43 2346 aa18.56■□□□□ 0.56
SNX8-208ENST00000480807 NEFLP07196 543 aa18.56■□□□□ 0.56
SNX8-208ENST00000480807 PLCD1P51178 756 aa18.56■□□□□ 0.56
SNX8-208ENST00000480807 GABPAQ06546 454 aa18.56■□□□□ 0.56
SNX8-208ENST00000480807 CERKLQ49MI3 558 aaPredicted RBP18.56■□□□□ 0.56
SNX8-208ENST00000480807 WDR18Q9BV38 432 aa18.56■□□□□ 0.56
SNX8-208ENST00000480807 HELLSQ9NRZ9 838 aa18.56■□□□□ 0.56
SNX8-208ENST00000480807 PCDH10Q9P2E7 1040 aa18.56■□□□□ 0.56
SNX8-208ENST00000480807 ZBTB21Q9ULJ3 1066 aa18.56■□□□□ 0.56
SNX8-208ENST00000480807 SLC45A1Q9Y2W3 748 aa18.56■□□□□ 0.56
SNX8-208ENST00000480807 TNRC18O15417 2968 aaPredicted RBP18.56■□□□□ 0.56
SNX8-208ENST00000480807 HIP1O00291 1037 aa18.55■□□□□ 0.56
SNX8-208ENST00000480807 PRKAB2O43741 272 aa18.55■□□□□ 0.56
SNX8-208ENST00000480807 CHGBP05060 677 aa18.55■□□□□ 0.56
SNX8-208ENST00000480807 SLURP2P0DP57 97 aa18.55■□□□□ 0.56
SNX8-208ENST00000480807 SLC4A8Q2Y0W8 1093 aa18.55■□□□□ 0.56
SNX8-208ENST00000480807 SBK1Q52WX2 424 aa18.55■□□□□ 0.56
SNX8-208ENST00000480807 PROCA1Q8NCQ7 364 aaPredicted RBP18.55■□□□□ 0.56
SNX8-208ENST00000480807 PATL2C9JE40 543 aaKnown RBP18.54■□□□□ 0.56
SNX8-208ENST00000480807 TLR2O60603 784 aa18.54■□□□□ 0.56
SNX8-208ENST00000480807 PABPC4Q13310 644 aaKnown RBP eCLIP18.54■□□□□ 0.56
SNX8-208ENST00000480807 ABCB5Q2M3G0 1257 aa18.54■□□□□ 0.56
SNX8-208ENST00000480807 C12orf60Q5U649 245 aa18.54■□□□□ 0.56
SNX8-208ENST00000480807 RILPL2Q969X0 211 aa18.54■□□□□ 0.56
SNX8-208ENST00000480807 PARK7Q99497 189 aaKnown RBP18.54■□□□□ 0.56
SNX8-208ENST00000480807 ZNF287Q9HBT7 754 aa18.54■□□□□ 0.56
SNX8-208ENST00000480807 TRIM75PA6NK02 468 aa18.53■□□□□ 0.56
SNX8-208ENST00000480807 GSG1L2A8MUP6 293 aa18.53■□□□□ 0.56
SNX8-208ENST00000480807 C19orf81C9J6K1 198 aa18.53■□□□□ 0.56
SNX8-208ENST00000480807 USP17L12C9JPN9 530 aa18.53■□□□□ 0.56
SNX8-208ENST00000480807 USP17L21D6R901 530 aa18.53■□□□□ 0.56
SNX8-208ENST00000480807 M0R2C6 588 aa18.53■□□□□ 0.56
SNX8-208ENST00000480807 ECM2O94769 699 aaPredicted RBP18.53■□□□□ 0.56
SNX8-208ENST00000480807 GDF11O95390 407 aa18.53■□□□□ 0.56
SNX8-208ENST00000480807 APPP05067 770 aa18.53■□□□□ 0.56
SNX8-208ENST00000480807 SHMT1P34896 483 aa18.53■□□□□ 0.56
SNX8-208ENST00000480807 TDO2P48775 406 aa18.53■□□□□ 0.56
SNX8-208ENST00000480807 MFAP1P55081 439 aaKnown RBP18.53■□□□□ 0.56
SNX8-208ENST00000480807 ARHGEF6Q15052 776 aa18.53■□□□□ 0.56
SNX8-208ENST00000480807 CCDC17Q96LX7 622 aa18.53■□□□□ 0.56
SNX8-208ENST00000480807 PNMA3Q9UL41 463 aa18.53■□□□□ 0.56
SNX8-208ENST00000480807 POTEFA5A3E0 1075 aa18.52■□□□□ 0.56
SNX8-208ENST00000480807 PDHXO00330 501 aa18.52■□□□□ 0.56
SNX8-208ENST00000480807 GH2P01242 217 aa18.52■□□□□ 0.56
SNX8-208ENST00000480807 SPP2Q13103 211 aa18.52■□□□□ 0.56
SNX8-208ENST00000480807 RRP1BQ14684 758 aaKnown RBP18.52■□□□□ 0.56
SNX8-208ENST00000480807 MCMDC2Q4G0Z9 681 aa18.52■□□□□ 0.56
SNX8-208ENST00000480807 CTR9Q6PD62 1173 aa18.52■□□□□ 0.56
SNX8-208ENST00000480807 GADL1Q6ZQY3 521 aa18.52■□□□□ 0.56
SNX8-208ENST00000480807 C16orf86Q6ZW13 317 aa18.52■□□□□ 0.56
SNX8-208ENST00000480807 CENPQQ7L2Z9 268 aaPredicted RBP18.52■□□□□ 0.56
SNX8-208ENST00000480807 ARHGAP39Q9C0H5 1083 aa18.52■□□□□ 0.56
SNX8-208ENST00000480807 USP17L10C9JJH3 530 aa18.51■□□□□ 0.55
SNX8-208ENST00000480807 SLC3A2P08195 630 aaKnown RBP18.51■□□□□ 0.55
SNX8-208ENST00000480807 BACE1P56817 501 aa18.51■□□□□ 0.55
SNX8-208ENST00000480807 MOGSQ13724 837 aa18.51■□□□□ 0.55
SNX8-208ENST00000480807 KIF22Q14807 665 aa18.51■□□□□ 0.55
SNX8-208ENST00000480807 SH3D19Q5HYK7 790 aa18.51■□□□□ 0.55
SNX8-208ENST00000480807 NAPBQ9H115 298 aa18.51■□□□□ 0.55
SNX8-208ENST00000480807 TMOD4Q9NZQ9 345 aa18.51■□□□□ 0.55
SNX8-208ENST00000480807 AGTPBP1Q9UPW5 1226 aa18.51■□□□□ 0.55
SNX8-208ENST00000480807 PTCH2Q9Y6C5 1203 aa18.51■□□□□ 0.55
SNX8-208ENST00000480807 ROBO3Q96MS0 1386 aa18.51■□□□□ 0.55
SNX8-208ENST00000480807 CYP2D6P10635 497 aa18.5■□□□□ 0.55
SNX8-208ENST00000480807 USP14P54578 494 aa18.5■□□□□ 0.55
SNX8-208ENST00000480807 LACTBP83111 547 aaPredicted RBP18.5■□□□□ 0.55
SNX8-208ENST00000480807 RAB3GAP1Q15042 981 aa18.5■□□□□ 0.55
SNX8-208ENST00000480807 TMEM179Q6ZVK1 233 aa18.5■□□□□ 0.55
SNX8-208ENST00000480807 IFNL3Q8IZI9 196 aa18.5■□□□□ 0.55
SNX8-208ENST00000480807 ARMC5Q96C12 935 aa18.5■□□□□ 0.55
SNX8-208ENST00000480807 CPA4Q9UI42 421 aa18.5■□□□□ 0.55
SNX8-208ENST00000480807 ZSWIM8A7E2V4 1837 aa18.49■□□□□ 0.55
SNX8-208ENST00000480807 HTTP42858 3142 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms