RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 USP40Q9NVE5 1235 aa15.11■□□□□ 0.01
USP11-208ENST00000480104 CYP2C19P33261 490 aa15.1■□□□□ 0.01
USP11-208ENST00000480104 ERVK-9P63128 1117 aa15.1■□□□□ 0.01
USP11-208ENST00000480104 ERVK-24P63145 666 aa15.1■□□□□ 0.01
USP11-208ENST00000480104 Q3C1V9 767 aa15.1■□□□□ 0.01
USP11-208ENST00000480104 CCDC30Q5VVM6 783 aa15.1■□□□□ 0.01
USP11-208ENST00000480104 LMBR1LQ6UX01 489 aa15.1■□□□□ 0.01
USP11-208ENST00000480104 EDC3Q96F86 508 aaKnown RBP15.1■□□□□ 0.01
USP11-208ENST00000480104 RBPJLQ9UBG7 517 aa15.1■□□□□ 0.01
USP11-208ENST00000480104 CACNA1BQ00975 2339 aa15.1■□□□□ 0.01
USP11-208ENST00000480104 TRIOO75962 3097 aa15.1■□□□□ 0.01
USP11-208ENST00000480104 PQBP1O60828 265 aaKnown RBP15.09■□□□□ 0.01
USP11-208ENST00000480104 CYBAP13498 195 aa15.09■□□□□ 0.01
USP11-208ENST00000480104 RAB30Q15771 203 aa15.09■□□□□ 0.01
USP11-208ENST00000480104 CCDC57Q2TAC2 916 aa15.09■□□□□ 0.01
USP11-208ENST00000480104 RASIP1Q5U651 963 aa15.09■□□□□ 0.01
USP11-208ENST00000480104 CCDC146Q8IYE0 955 aa15.09■□□□□ 0.01
USP11-208ENST00000480104 C8orf58Q8NAV2 365 aa15.09■□□□□ 0.01
USP11-208ENST00000480104 PHOX2BQ99453 314 aa15.09■□□□□ 0.01
USP11-208ENST00000480104 MYH16Q9H6N6 1097 aa15.09■□□□□ 0.01
USP11-208ENST00000480104 MSRAQ9UJ68 235 aa15.09■□□□□ 0.01
USP11-208ENST00000480104 EPG5Q9HCE0 2579 aa15.08■□□□□ 0
USP11-208ENST00000480104 DDTLA6NHG4 134 aaPredicted RBP15.08■□□□□ 0
USP11-208ENST00000480104 ST18O60284 1047 aa15.08■□□□□ 0
USP11-208ENST00000480104 ATP2B2Q01814 1243 aa15.08■□□□□ 0
USP11-208ENST00000480104 CAVIN4Q5BKX8 364 aa15.08■□□□□ 0
USP11-208ENST00000480104 TMEM240Q5SV17 173 aa15.08■□□□□ 0
USP11-208ENST00000480104 PAGR1Q9BTK6 254 aa15.08■□□□□ 0
USP11-208ENST00000480104 PUS3Q9BZE2 481 aaKnown RBP15.08■□□□□ 0
USP11-208ENST00000480104 SLC28A3Q9HAS3 691 aa15.08■□□□□ 0
USP11-208ENST00000480104 CWC22Q9HCG8 908 aaKnown RBP15.08■□□□□ 0
USP11-208ENST00000480104 TMEM39AQ9NV64 488 aa15.08■□□□□ 0
USP11-208ENST00000480104 YBX2Q9Y2T7 364 aaKnown RBP15.08■□□□□ 0
USP11-208ENST00000480104 NDUFB9Q9Y6M9 179 aa15.08■□□□□ 0
USP11-208ENST00000480104 RFX7Q2KHR2 1363 aa15.08■□□□□ 0
USP11-208ENST00000480104 FAM196BA6NMK8 535 aa15.07■□□□□ 0
USP11-208ENST00000480104 ENTPD3O75355 529 aa15.07■□□□□ 0
USP11-208ENST00000480104 LRRC41Q15345 812 aa15.07■□□□□ 0
USP11-208ENST00000480104 SH3D19Q5HYK7 790 aa15.07■□□□□ 0
USP11-208ENST00000480104 EPHA10Q5JZY3 1008 aa15.07■□□□□ 0
USP11-208ENST00000480104 C16orf59Q7L2K0 433 aa15.07■□□□□ 0
USP11-208ENST00000480104 KCNH6Q9H252 994 aa15.07■□□□□ 0
USP11-208ENST00000480104 BRWD1Q9NSI6 2320 aa15.07■□□□□ 0
USP11-208ENST00000480104 ZNF318Q5VUA4 2279 aa15.06■□□□□ 0
USP11-208ENST00000480104 ZNF853P0CG23 659 aa15.06■□□□□ 0
USP11-208ENST00000480104 TRIM26Q12899 539 aaPredicted RBP15.06■□□□□ 0
USP11-208ENST00000480104 G2E3Q7L622 706 aa15.06■□□□□ 0
USP11-208ENST00000480104 SLC44A5Q8NCS7 719 aa15.06■□□□□ 0
USP11-208ENST00000480104 IDI2Q9BXS1 227 aa15.06■□□□□ 0
USP11-208ENST00000480104 COG5Q9UP83 839 aa15.06■□□□□ 0
USP11-208ENST00000480104 DCHS1Q96JQ0 3298 aa15.05■□□□□ -0
USP11-208ENST00000480104 HOXA7P31268 230 aaPredicted RBP15.05■□□□□ -0
USP11-208ENST00000480104 MTMR2Q13614 643 aa15.05■□□□□ -0
USP11-208ENST00000480104 CSPP1Q1MSJ5 1256 aa15.05■□□□□ -0
USP11-208ENST00000480104 NPLOC4Q8TAT6 608 aa15.05■□□□□ -0
USP11-208ENST00000480104 CLSPNQ9HAW4 1339 aa15.05■□□□□ -0
USP11-208ENST00000480104 IGHA2P01877 340 aa15.04■□□□□ -0
USP11-208ENST00000480104 HOXC6P09630 235 aa15.04■□□□□ -0
USP11-208ENST00000480104 PRDX5P30044 214 aa15.04■□□□□ -0
USP11-208ENST00000480104 FAAP100Q0VG06 881 aa15.04■□□□□ -0
USP11-208ENST00000480104 FAM47AQ5JRC9 791 aa15.04■□□□□ -0
USP11-208ENST00000480104 CCDC174Q6PII3 467 aa15.04■□□□□ -0
USP11-208ENST00000480104 LINS1Q8NG48 757 aa15.04■□□□□ -0
USP11-208ENST00000480104 TBC1D2Q9BYX2 928 aa15.04■□□□□ -0
USP11-208ENST00000480104 DDX4Q9NQI0 724 aaKnown RBP15.04■□□□□ -0
USP11-208ENST00000480104 PHF24Q9UPV7 400 aa15.04■□□□□ -0
USP11-208ENST00000480104 SLC15A5A6NIM6 579 aa15.03■□□□□ -0
USP11-208ENST00000480104 USP17L5A8MUK1 530 aa15.03■□□□□ -0
USP11-208ENST00000480104 SEPT4O43236 478 aa15.03■□□□□ -0
USP11-208ENST00000480104 GLRX3O76003 335 aaKnown RBP15.03■□□□□ -0
USP11-208ENST00000480104 TIMP1P01033 207 aa15.03■□□□□ -0
USP11-208ENST00000480104 PPIGQ13427 754 aaKnown RBP eCLIP15.03■□□□□ -0
USP11-208ENST00000480104 WDR78Q5VTH9 848 aa15.03■□□□□ -0
USP11-208ENST00000480104 WDR66Q8TBY9 1149 aa15.03■□□□□ -0
USP11-208ENST00000480104 OSBPL5Q9H0X9 879 aaPredicted RBP15.03■□□□□ -0
USP11-208ENST00000480104 MTCH2Q9Y6C9 303 aa15.03■□□□□ -0
USP11-208ENST00000480104 MROH5Q6ZUA9 1318 aa15.02■□□□□ -0
USP11-208ENST00000480104 ACRP10323 421 aa15.02■□□□□ -0
USP11-208ENST00000480104 PTPREP23469 700 aa15.02■□□□□ -0
USP11-208ENST00000480104 ZEB1P37275 1124 aaPredicted RBP15.02■□□□□ -0
USP11-208ENST00000480104 PICALMQ13492 652 aa15.02■□□□□ -0
USP11-208ENST00000480104 RRP1BQ14684 758 aaKnown RBP15.02■□□□□ -0
USP11-208ENST00000480104 NCBP3Q53F19 620 aaKnown RBP15.02■□□□□ -0
USP11-208ENST00000480104 PPP2R2DQ66LE6 453 aa15.02■□□□□ -0
USP11-208ENST00000480104 MFSD5Q6N075 450 aa15.02■□□□□ -0
USP11-208ENST00000480104 ZNF365Q70YC5 407 aa15.02■□□□□ -0
USP11-208ENST00000480104 TSPYL6Q8N831 410 aa15.02■□□□□ -0
USP11-208ENST00000480104 HLA-CQ95604 372 aa15.02■□□□□ -0
USP11-208ENST00000480104 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.02■□□□□ -0
USP11-208ENST00000480104 TMOD4Q9NZQ9 345 aa15.02■□□□□ -0
USP11-208ENST00000480104 PTPRZ1P23471 2315 aaPredicted RBP15.01□□□□□ -0.01
USP11-208ENST00000480104 GTPBP6O43824 516 aaPredicted RBP15.01□□□□□ -0.01
USP11-208ENST00000480104 CSF2RAP15509 400 aa15.01□□□□□ -0.01
USP11-208ENST00000480104 GRB14Q14449 540 aa15.01□□□□□ -0.01
USP11-208ENST00000480104 KRT40Q6A162 431 aa15.01□□□□□ -0.01
USP11-208ENST00000480104 PSRC1Q6PGN9 363 aaPredicted RBP15.01□□□□□ -0.01
USP11-208ENST00000480104 GTF3C2Q8WUA4 911 aaPredicted RBP15.01□□□□□ -0.01
USP11-208ENST00000480104 DNAAF4Q8WXU2 420 aa15.01□□□□□ -0.01
USP11-208ENST00000480104 ANKS1AQ92625 1134 aa15.01□□□□□ -0.01
USP11-208ENST00000480104 STK31Q9BXU1 1019 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms