RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 HDAC5Q9UQL6 1122 aa7.74□□□□□ -1.17
SF3B1-209ENST00000479532 NRXN2Q9P2S2 1712 aa7.74□□□□□ -1.17
SF3B1-209ENST00000479532 SFI1A8K8P3 1242 aa7.73□□□□□ -1.17
SF3B1-209ENST00000479532 NEURL1BA8MQ27 555 aa7.73□□□□□ -1.17
SF3B1-209ENST00000479532 F6X3S4 739 aa7.73□□□□□ -1.17
SF3B1-209ENST00000479532 ALDH1L1O75891 902 aa7.73□□□□□ -1.17
SF3B1-209ENST00000479532 ATP2B4P23634 1241 aa7.73□□□□□ -1.17
SF3B1-209ENST00000479532 ARTNQ5T4W7 220 aa7.73□□□□□ -1.17
SF3B1-209ENST00000479532 SUSD4Q5VX71 490 aa7.73□□□□□ -1.17
SF3B1-209ENST00000479532 LINC00114Q6XXX2 140 aa7.73□□□□□ -1.17
SF3B1-209ENST00000479532 NLRP10Q86W26 655 aa7.73□□□□□ -1.17
SF3B1-209ENST00000479532 DZIP1LQ8IYY4 767 aaKnown RBP7.73□□□□□ -1.17
SF3B1-209ENST00000479532 KLRG1Q96E93 195 aa7.73□□□□□ -1.17
SF3B1-209ENST00000479532 CHMP4BQ9H444 224 aaKnown RBP7.73□□□□□ -1.17
SF3B1-209ENST00000479532 C9orf78Q9NZ63 289 aaPredicted RBP7.73□□□□□ -1.17
SF3B1-209ENST00000479532 NOP53Q9NZM5 478 aaKnown RBP7.73□□□□□ -1.17
SF3B1-209ENST00000479532 GNEQ9Y223 722 aaKnown RBP7.73□□□□□ -1.17
SF3B1-209ENST00000479532 UBN2Q6ZU65 1347 aa7.73□□□□□ -1.17
SF3B1-209ENST00000479532 SH3TC1Q8TE82 1336 aa7.73□□□□□ -1.17
SF3B1-209ENST00000479532 LAMB2P55268 1798 aa7.72□□□□□ -1.17
SF3B1-209ENST00000479532 NTSR2O95665 410 aa7.72□□□□□ -1.17
SF3B1-209ENST00000479532 PCCAP05165 728 aaPredicted RBP7.72□□□□□ -1.17
SF3B1-209ENST00000479532 TRIM27P14373 513 aa7.72□□□□□ -1.17
SF3B1-209ENST00000479532 ADD1P35611 737 aaKnown RBP7.72□□□□□ -1.17
SF3B1-209ENST00000479532 PDE6BP35913 854 aa7.72□□□□□ -1.17
SF3B1-209ENST00000479532 GATA4P43694 442 aa7.72□□□□□ -1.17
SF3B1-209ENST00000479532 MFAP1P55081 439 aaKnown RBP7.72□□□□□ -1.17
SF3B1-209ENST00000479532 DDR1Q08345 913 aa7.72□□□□□ -1.17
SF3B1-209ENST00000479532 BEND3Q5T5X7 828 aa7.72□□□□□ -1.17
SF3B1-209ENST00000479532 C1orf229Q6ZS94 237 aaPredicted RBP7.72□□□□□ -1.17
SF3B1-209ENST00000479532 ZBTB38Q8NAP3 1195 aaPredicted RBP7.72□□□□□ -1.17
SF3B1-209ENST00000479532 NUCKS1Q9H1E3 243 aaKnown RBP7.72□□□□□ -1.17
SF3B1-209ENST00000479532 KIF13BQ9NQT8 1826 aa7.71□□□□□ -1.17
SF3B1-209ENST00000479532 PRMT3O60678 531 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 IGKV5-2P06315 115 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 ERVK-9P63128 1117 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 GCKRQ14397 625 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 CWF19L2Q2TBE0 894 aaKnown RBP7.71□□□□□ -1.18
SF3B1-209ENST00000479532 CC2D2BQ6DHV5 1058 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 PRR5LQ6MZQ0 368 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 ITPRIPQ8IWB1 547 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 NLRP3Q96P20 1036 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 BRIP1Q9BX63 1249 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 CYLDQ9NQC7 956 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 CD2APQ9Y5K6 639 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 MYH3P11055 1940 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 ABCC4O15439 1325 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 CDHR2Q9BYE9 1310 aa7.71□□□□□ -1.18
SF3B1-209ENST00000479532 RIC1Q4ADV7 1423 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 C10orf71Q711Q0 1435 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 H0YIN7 160 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 GRM8O00222 908 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 IRS4O14654 1257 aaPredicted RBP7.7□□□□□ -1.18
SF3B1-209ENST00000479532 LGR5O75473 907 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 GNAI3P08754 354 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 RRP1P56182 461 aaKnown RBP7.7□□□□□ -1.18
SF3B1-209ENST00000479532 TGFB2P61812 414 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 POU4F2Q12837 409 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 PDE3AQ14432 1141 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 INTS3Q68E01 1043 aaKnown RBP7.7□□□□□ -1.18
SF3B1-209ENST00000479532 GOLGA6L1Q8N7Z2 621 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 KDF1Q8NAX2 398 aaPredicted RBP7.7□□□□□ -1.18
SF3B1-209ENST00000479532 FAM89AQ96GI7 184 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 PRIMPOLQ96LW4 560 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 CFHR5Q9BXR6 569 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 PHF24Q9UPV7 400 aa7.7□□□□□ -1.18
SF3B1-209ENST00000479532 DDX60Q8IY21 1712 aaKnown RBP7.69□□□□□ -1.18
SF3B1-209ENST00000479532 ANKRD31Q8N7Z5 1873 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 MEN1O00255 615 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 PLIN1O60240 522 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 PDE8AO60658 829 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 UBTFL1P0CB47 393 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-209ENST00000479532 ARID4AP29374 1257 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-209ENST00000479532 DEKP35659 375 aaKnown RBP7.69□□□□□ -1.18
SF3B1-209ENST00000479532 CCDC152Q4G0S7 254 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 SLC10A5Q5PT55 438 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 SND1Q7KZF4 910 aaKnown RBP eCLIP7.69□□□□□ -1.18
SF3B1-209ENST00000479532 UBE3BQ7Z3V4 1068 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 C2CD5Q86YS7 1000 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 KRTAP19-1Q8IUB9 90 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 TMEM57Q8N5G2 664 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.69□□□□□ -1.18
SF3B1-209ENST00000479532 TSEN2Q8NCE0 465 aaKnown RBP7.69□□□□□ -1.18
SF3B1-209ENST00000479532 RPGRQ92834 1020 aaKnown RBP7.69□□□□□ -1.18
SF3B1-209ENST00000479532 RBM17Q96I25 401 aaKnown RBP7.69□□□□□ -1.18
SF3B1-209ENST00000479532 HINFPQ9BQA5 517 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 TMX4Q9H1E5 349 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-209ENST00000479532 OSBPL3Q9H4L5 887 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 DDX19BQ9UMR2 479 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 DLEC1Q9Y238 1755 aa7.69□□□□□ -1.18
SF3B1-209ENST00000479532 LILRA1O75019 489 aa7.68□□□□□ -1.18
SF3B1-209ENST00000479532 NPR1P16066 1061 aa7.68□□□□□ -1.18
SF3B1-209ENST00000479532 ALDH1B1P30837 517 aa7.68□□□□□ -1.18
SF3B1-209ENST00000479532 SCNN1AP37088 669 aa7.68□□□□□ -1.18
SF3B1-209ENST00000479532 CTSWP56202 376 aa7.68□□□□□ -1.18
SF3B1-209ENST00000479532 MVPQ14764 893 aaKnown RBP7.68□□□□□ -1.18
SF3B1-209ENST00000479532 OCLNQ16625 522 aa7.68□□□□□ -1.18
SF3B1-209ENST00000479532 GLIPR1L2Q4G1C9 344 aa7.68□□□□□ -1.18
SF3B1-209ENST00000479532 DDX46Q7L014 1031 aaKnown RBP7.68□□□□□ -1.18
SF3B1-209ENST00000479532 ZNF622Q969S3 477 aaKnown RBP eCLIP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms