RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 MCOLN1Q9GZU1 580 aa9.08□□□□□ -0.96
SSR1-206ENST00000479365 TDRD3Q9H7E2 651 aaKnown RBP9.08□□□□□ -0.96
SSR1-206ENST00000479365 VEZTQ9HBM0 779 aa9.08□□□□□ -0.96
SSR1-206ENST00000479365 ZNF70Q9UC06 446 aaPredicted RBP9.08□□□□□ -0.96
SSR1-206ENST00000479365 ANGEL1Q9UNK9 670 aaKnown RBP9.08□□□□□ -0.96
SSR1-206ENST00000479365 LRRFIP2Q9Y608 721 aaKnown RBP9.08□□□□□ -0.96
SSR1-206ENST00000479365 ARAP2Q8WZ64 1704 aa9.08□□□□□ -0.96
SSR1-206ENST00000479365 BCAR3O75815 825 aa9.07□□□□□ -0.96
SSR1-206ENST00000479365 NF2P35240 595 aa9.07□□□□□ -0.96
SSR1-206ENST00000479365 CRKP46108 304 aa9.07□□□□□ -0.96
SSR1-206ENST00000479365 RASA3Q14644 834 aa9.07□□□□□ -0.96
SSR1-206ENST00000479365 PUM3Q15397 648 aaKnown RBP9.07□□□□□ -0.96
SSR1-206ENST00000479365 MAP3K11Q16584 847 aa9.07□□□□□ -0.96
SSR1-206ENST00000479365 PLA2G2CQ5R387 149 aa9.07□□□□□ -0.96
SSR1-206ENST00000479365 NBPF12Q5TAG4 269 aaPredicted RBP9.07□□□□□ -0.96
SSR1-206ENST00000479365 INTS3Q68E01 1043 aaKnown RBP9.07□□□□□ -0.96
SSR1-206ENST00000479365 LYPD8Q6UX82 237 aa9.07□□□□□ -0.96
SSR1-206ENST00000479365 DZIP1LQ8IYY4 767 aaKnown RBP9.07□□□□□ -0.96
SSR1-206ENST00000479365 LRRN4Q8WUT4 740 aa9.07□□□□□ -0.96
SSR1-206ENST00000479365 CLMNQ96JQ2 1002 aa9.07□□□□□ -0.96
SSR1-206ENST00000479365 NUDT12Q9BQG2 462 aa9.07□□□□□ -0.96
SSR1-206ENST00000479365 SIL1Q9H173 461 aa9.07□□□□□ -0.96
SSR1-206ENST00000479365 PA2G4Q9UQ80 394 aaKnown RBP9.07□□□□□ -0.96
SSR1-206ENST00000479365 KIF16BQ96L93 1317 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 ECM29Q5VYK3 1845 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 CARNS1A5YM72 827 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 MYO1BO43795 1136 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 DGKZQ13574 1117 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 PTPRNQ16849 979 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 CAVIN4Q5BKX8 364 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 ARMC9Q7Z3E5 817 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 VPS37DQ86XT2 251 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 ARHGAP45Q92619 1136 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 TEPSINQ96N21 525 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 TRIM34Q9BYJ4 488 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 PPP2R3BQ9Y5P8 575 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 IVNS1ABPQ9Y6Y0 642 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 CASP8AP2Q9UKL3 1982 aa9.06□□□□□ -0.96
SSR1-206ENST00000479365 TCP10L2B9ZVM9 353 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 USP2O75604 605 aaPredicted RBP9.05□□□□□ -0.96
SSR1-206ENST00000479365 CIAO1O76071 339 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 TBC1D8O95759 1140 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 IFIT1P09914 478 aaKnown RBP9.05□□□□□ -0.96
SSR1-206ENST00000479365 CCNYL3P0C7X3 344 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 TRIM27P14373 513 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 TM4SF4P48230 202 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 CACNB3P54284 484 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 SPRYD7Q5W111 196 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 ANKLE1Q8NAG6 615 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 TBC1D22AQ8WUA7 517 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 LPIN2Q92539 896 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 TMEM39BQ9GZU3 492 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 R3HDMLQ9H3Y0 253 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 ALG2Q9H553 416 aa9.05□□□□□ -0.96
SSR1-206ENST00000479365 HMX1Q9NP08 348 aaPredicted RBP9.05□□□□□ -0.96
SSR1-206ENST00000479365 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.05□□□□□ -0.96
SSR1-206ENST00000479365 PALM3A6NDB9 673 aaPredicted RBP9.04□□□□□ -0.96
SSR1-206ENST00000479365 CCDC85CA6NKD9 419 aa9.04□□□□□ -0.96
SSR1-206ENST00000479365 FRAT2O75474 233 aaPredicted RBP9.04□□□□□ -0.96
SSR1-206ENST00000479365 SLC5A1P13866 664 aa9.04□□□□□ -0.96
SSR1-206ENST00000479365 ADORA1P30542 326 aa9.04□□□□□ -0.96
SSR1-206ENST00000479365 HDLBPQ00341 1268 aaKnown RBP9.04□□□□□ -0.96
SSR1-206ENST00000479365 ATP2B3Q16720 1220 aa9.04□□□□□ -0.96
SSR1-206ENST00000479365 DIEXFQ68CQ4 756 aaKnown RBP9.04□□□□□ -0.96
SSR1-206ENST00000479365 APOBEC3HQ6NTF7 200 aaKnown RBP9.04□□□□□ -0.96
SSR1-206ENST00000479365 ATF7IPQ6VMQ6 1270 aa9.04□□□□□ -0.96
SSR1-206ENST00000479365 SND1Q7KZF4 910 aaKnown RBP eCLIP9.04□□□□□ -0.967e-8■■■□□ 15.4
SSR1-206ENST00000479365 TEKT1Q969V4 418 aa9.04□□□□□ -0.96
SSR1-206ENST00000479365 WNK4Q96J92 1243 aa9.04□□□□□ -0.96
SSR1-206ENST00000479365 COPRSQ9NQ92 184 aa9.04□□□□□ -0.96
SSR1-206ENST00000479365 MAP10Q9P2G4 905 aa9.04□□□□□ -0.96
SSR1-206ENST00000479365 PPP1R12BO60237 982 aaPredicted RBP9.03□□□□□ -0.96
SSR1-206ENST00000479365 PRDX5P30044 214 aa9.03□□□□□ -0.96
SSR1-206ENST00000479365 CTHP32929 405 aa9.03□□□□□ -0.96
SSR1-206ENST00000479365 IL15P40933 162 aaPredicted RBP9.03□□□□□ -0.96
SSR1-206ENST00000479365 PHKA1P46020 1223 aa9.03□□□□□ -0.96
SSR1-206ENST00000479365 VAC14Q08AM6 782 aa9.03□□□□□ -0.96
SSR1-206ENST00000479365 MTX1Q13505 466 aa9.03□□□□□ -0.96
SSR1-206ENST00000479365 TNFAIP1Q13829 316 aa9.03□□□□□ -0.96
SSR1-206ENST00000479365 SUPT20HL1Q3ZLR7 823 aa9.03□□□□□ -0.96
SSR1-206ENST00000479365 PTCRAQ6ISU1 281 aaPredicted RBP9.03□□□□□ -0.96
SSR1-206ENST00000479365 FRAT1Q92837 279 aaPredicted RBP9.03□□□□□ -0.96
SSR1-206ENST00000479365 EMID1Q96A84 441 aaPredicted RBP9.03□□□□□ -0.96
SSR1-206ENST00000479365 SLC10A4Q96EP9 437 aa9.03□□□□□ -0.96
SSR1-206ENST00000479365 ZDHHC15Q96MV8 337 aa9.03□□□□□ -0.96
SSR1-206ENST00000479365 CEP126Q9P2H0 1117 aa9.03□□□□□ -0.96
SSR1-206ENST00000479365 OTOFQ9HC10 1997 aa9.03□□□□□ -0.96
SSR1-206ENST00000479365 AKAP11Q9UKA4 1901 aa9.02□□□□□ -0.97
SSR1-206ENST00000479365 IGF2BP3O00425 579 aaKnown RBP eCLIP9.02□□□□□ -0.97
SSR1-206ENST00000479365 SRGAP3O43295 1099 aa9.02□□□□□ -0.97
SSR1-206ENST00000479365 ATG7O95352 703 aa9.02□□□□□ -0.97
SSR1-206ENST00000479365 GNAI3P08754 354 aa9.02□□□□□ -0.97
SSR1-206ENST00000479365 IREB2P48200 963 aaKnown RBP9.02□□□□□ -0.97
SSR1-206ENST00000479365 TIMM10P62072 90 aa9.02□□□□□ -0.97
SSR1-206ENST00000479365 HNRNPUQ00839 825 aaKnown RBP eCLIP9.02□□□□□ -0.97
SSR1-206ENST00000479365 SREBF2Q12772 1141 aa9.02□□□□□ -0.97
SSR1-206ENST00000479365 HHIPL2Q6UWX4 724 aa9.02□□□□□ -0.97
SSR1-206ENST00000479365 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.02□□□□□ -0.97
SSR1-206ENST00000479365 TMEM57Q8N5G2 664 aa9.02□□□□□ -0.97
SSR1-206ENST00000479365 ZNF296Q8WUU4 475 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms