RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 GPR108Q9NPR9 543 aa8.15□□□□□ -1.1
USP48-208ENST00000479177 STAP2Q9UGK3 403 aa8.15□□□□□ -1.1
USP48-208ENST00000479177 RIPOR2Q9Y4F9 1068 aa8.15□□□□□ -1.1
USP48-208ENST00000479177 FPGT-TNNI3KV9GXZ4 949 aa8.15□□□□□ -1.1
USP48-208ENST00000479177 KIAA1551Q9HCM1 1747 aa8.15□□□□□ -1.11
USP48-208ENST00000479177 MROH5Q6ZUA9 1318 aa8.14□□□□□ -1.11
USP48-208ENST00000479177 MEN1O00255 615 aa8.14□□□□□ -1.11
USP48-208ENST00000479177 ITGB2P05107 769 aa8.14□□□□□ -1.11
USP48-208ENST00000479177 PDE1AP54750 535 aa8.14□□□□□ -1.11
USP48-208ENST00000479177 R3HDM1Q15032 1099 aaKnown RBP8.14□□□□□ -1.11
USP48-208ENST00000479177 METTL24Q5JXM2 366 aa8.14□□□□□ -1.11
USP48-208ENST00000479177 TTC22Q5TAA0 569 aa8.14□□□□□ -1.11
USP48-208ENST00000479177 DDX46Q7L014 1031 aaKnown RBP8.14□□□□□ -1.11
USP48-208ENST00000479177 ANKRD18AQ8IVF6 992 aa8.14□□□□□ -1.11
USP48-208ENST00000479177 CELF1Q92879 486 aaKnown RBP8.14□□□□□ -1.11
USP48-208ENST00000479177 EAF2Q96CJ1 260 aaPredicted RBP8.14□□□□□ -1.11
USP48-208ENST00000479177 BCL11AQ9H165 835 aa8.14□□□□□ -1.11
USP48-208ENST00000479177 CNNM1Q9NRU3 951 aa8.14□□□□□ -1.11
USP48-208ENST00000479177 TLR7Q9NYK1 1049 aaKnown RBP8.14□□□□□ -1.11
USP48-208ENST00000479177 LTBP1Q14766 1721 aa8.14□□□□□ -1.11
USP48-208ENST00000479177 AK9Q5TCS8 1911 aa8.13□□□□□ -1.11
USP48-208ENST00000479177 TTC41PQ6P2S7 1318 aa8.13□□□□□ -1.11
USP48-208ENST00000479177 MYCP01106 439 aaPredicted RBP8.13□□□□□ -1.11
USP48-208ENST00000479177 IFIT2P09913 472 aaKnown RBP8.13□□□□□ -1.11
USP48-208ENST00000479177 GSPT1P15170 499 aaKnown RBP8.13□□□□□ -1.11
USP48-208ENST00000479177 HOXA10P31260 410 aaPredicted RBP8.13□□□□□ -1.11
USP48-208ENST00000479177 FOXK2Q01167 660 aa8.13□□□□□ -1.11
USP48-208ENST00000479177 GRAPQ13588 217 aa8.13□□□□□ -1.11
USP48-208ENST00000479177 BMP2KLQ5H9B9 411 aa8.13□□□□□ -1.11
USP48-208ENST00000479177 TSHZ3Q63HK5 1081 aa8.13□□□□□ -1.11
USP48-208ENST00000479177 CYP2U1Q7Z449 544 aa8.13□□□□□ -1.11
USP48-208ENST00000479177 GRAPLQ8TC17 118 aaPredicted RBP8.13□□□□□ -1.11
USP48-208ENST00000479177 RNF217Q8TC41 542 aa8.13□□□□□ -1.11
USP48-208ENST00000479177 RPGRQ92834 1020 aaKnown RBP8.13□□□□□ -1.11
USP48-208ENST00000479177 MPHOSPH8Q99549 860 aa8.13□□□□□ -1.11
USP48-208ENST00000479177 BSDC1Q9NW68 430 aaPredicted RBP8.13□□□□□ -1.11
USP48-208ENST00000479177 DBNLQ9UJU6 430 aaKnown RBP8.13□□□□□ -1.11
USP48-208ENST00000479177 CACNA1SQ13698 1873 aa8.13□□□□□ -1.11
USP48-208ENST00000479177 A0A1B0GUL7 405 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 ZBTB7AO95365 584 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 IL2RAP01589 272 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 SRGNP10124 158 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 PDE6BP35913 854 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 RPS8P62241 208 aaKnown RBP8.12□□□□□ -1.11
USP48-208ENST00000479177 CHRNDQ07001 517 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 NCOA4Q13772 614 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 PUM3Q15397 648 aaKnown RBP8.12□□□□□ -1.11
USP48-208ENST00000479177 ATP2B3Q16720 1220 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 MAP7D1Q3KQU3 841 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 PI4K2BQ8TCG2 481 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 SCARF2Q96GP6 870 aaPredicted RBP8.12□□□□□ -1.11
USP48-208ENST00000479177 RBM17Q96I25 401 aaKnown RBP8.12□□□□□ -1.11
USP48-208ENST00000479177 GPATCH3Q96I76 525 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 CRAMP1Q96RY5 1269 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 DBNDD2Q9BQY9 259 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 MTFR1LQ9H019 292 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 CCDC8Q9H0W5 538 aaPredicted RBP8.12□□□□□ -1.11
USP48-208ENST00000479177 ECHDC1Q9NTX5 307 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 AKAP2Q9Y2D5 859 aa8.12□□□□□ -1.11
USP48-208ENST00000479177 USP17L5A8MUK1 530 aa8.11□□□□□ -1.11
USP48-208ENST00000479177 ADAM23O75077 832 aa8.11□□□□□ -1.11
USP48-208ENST00000479177 PDE8BO95263 885 aa8.11□□□□□ -1.11
USP48-208ENST00000479177 NPR1P16066 1061 aa8.11□□□□□ -1.11
USP48-208ENST00000479177 FGFR2P21802 821 aa8.11□□□□□ -1.11
USP48-208ENST00000479177 ADORA1P30542 326 aa8.11□□□□□ -1.11
USP48-208ENST00000479177 USP4Q13107 963 aa8.11□□□□□ -1.11
USP48-208ENST00000479177 C8orf34Q49A92 452 aa8.11□□□□□ -1.11
USP48-208ENST00000479177 SLC51AQ86UW1 340 aa8.11□□□□□ -1.11
USP48-208ENST00000479177 CALR3Q96L12 384 aaKnown RBP8.11□□□□□ -1.11
USP48-208ENST00000479177 MINPP1Q9UNW1 487 aa8.11□□□□□ -1.11
USP48-208ENST00000479177 AKAP11Q9UKA4 1901 aa8.11□□□□□ -1.11
USP48-208ENST00000479177 SLX4Q8IY92 1834 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 DUOX1Q9NRD9 1551 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 ERC2O15083 957 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 GLRX3O76003 335 aaKnown RBP8.1□□□□□ -1.11
USP48-208ENST00000479177 CELA2BP08218 269 aaPredicted RBP8.1□□□□□ -1.11
USP48-208ENST00000479177 SLC5A1P13866 664 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 POLD1P28340 1107 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 TIMM10P62072 90 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 CLN3Q13286 438 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 GAS6Q14393 721 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 PLA2G4EQ3MJ16 856 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 STYK1Q6J9G0 422 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 TMC4Q7Z404 712 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 C2CD5Q86YS7 1000 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 LPIN2Q92539 896 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 MASTLQ96GX5 879 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 ZMYND15Q9H091 742 aa8.1□□□□□ -1.11
USP48-208ENST00000479177 CUEDC1Q9NWM3 386 aaPredicted RBP8.1□□□□□ -1.11
USP48-208ENST00000479177 TFIP11Q9UBB9 837 aaKnown RBP8.1□□□□□ -1.11
USP48-208ENST00000479177 BRCA1P38398 1863 aaKnown RBP8.1□□□□□ -1.11
USP48-208ENST00000479177 CNTNAP5Q8WYK1 1306 aa8.09□□□□□ -1.11
USP48-208ENST00000479177 SNAP23O00161 211 aa8.09□□□□□ -1.11
USP48-208ENST00000479177 TAF5LO75529 589 aa8.09□□□□□ -1.11
USP48-208ENST00000479177 BBOX1O75936 387 aa8.09□□□□□ -1.11
USP48-208ENST00000479177 GNRH1P01148 92 aa8.09□□□□□ -1.11
USP48-208ENST00000479177 RHOQP17081 205 aa8.09□□□□□ -1.11
USP48-208ENST00000479177 ATP5JP18859 108 aa8.09□□□□□ -1.11
USP48-208ENST00000479177 SDSP20132 328 aa8.09□□□□□ -1.11
USP48-208ENST00000479177 CHRNA5P30532 468 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms