RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CCL15Q16663 113 aa18.54■□□□□ 0.56
C9orf3-217ENST00000479161 FASTKD5Q7L8L6 764 aaKnown RBP18.54■□□□□ 0.56
C9orf3-217ENST00000479161 PRRT2Q7Z6L0 340 aaPredicted RBP18.54■□□□□ 0.56
C9orf3-217ENST00000479161 AS3MTQ9HBK9 375 aa18.54■□□□□ 0.56
C9orf3-217ENST00000479161 SLC45A1Q9Y2W3 748 aa18.54■□□□□ 0.56
C9orf3-217ENST00000479161 TRIM6-TRIM34B2RNG4 842 aa18.53■□□□□ 0.56
C9orf3-217ENST00000479161 M0R2C6 588 aa18.53■□□□□ 0.56
C9orf3-217ENST00000479161 SHMT1P34896 483 aa18.53■□□□□ 0.56
C9orf3-217ENST00000479161 LBX1P52954 281 aa18.53■□□□□ 0.56
C9orf3-217ENST00000479161 MCMDC2Q4G0Z9 681 aa18.53■□□□□ 0.56
C9orf3-217ENST00000479161 CTR9Q6PD62 1173 aa18.53■□□□□ 0.56
C9orf3-217ENST00000479161 ANKRD23Q86SG2 305 aa18.53■□□□□ 0.56
C9orf3-217ENST00000479161 TNS4Q8IZW8 715 aa18.53■□□□□ 0.56
C9orf3-217ENST00000479161 ZNF280CQ8ND82 737 aa18.53■□□□□ 0.56
C9orf3-217ENST00000479161 CCDC17Q96LX7 622 aa18.53■□□□□ 0.56
C9orf3-217ENST00000479161 NACAP1Q9BZK3 213 aa18.53■□□□□ 0.56
C9orf3-217ENST00000479161 SDSP20132 328 aa18.52■□□□□ 0.56
C9orf3-217ENST00000479161 MFAP1P55081 439 aaKnown RBP18.52■□□□□ 0.56
C9orf3-217ENST00000479161 MOGSQ13724 837 aa18.52■□□□□ 0.56
C9orf3-217ENST00000479161 ALX1Q15699 326 aa18.52■□□□□ 0.56
C9orf3-217ENST00000479161 CERKLQ49MI3 558 aaPredicted RBP18.52■□□□□ 0.56
C9orf3-217ENST00000479161 SH3D19Q5HYK7 790 aa18.52■□□□□ 0.56
C9orf3-217ENST00000479161 TTC22Q5TAA0 569 aa18.52■□□□□ 0.56
C9orf3-217ENST00000479161 C16orf86Q6ZW13 317 aa18.52■□□□□ 0.56
C9orf3-217ENST00000479161 ZBTB21Q9ULJ3 1066 aa18.52■□□□□ 0.56
C9orf3-217ENST00000479161 ROBO3Q96MS0 1386 aa18.52■□□□□ 0.55
C9orf3-217ENST00000479161 CASP8AP2Q9UKL3 1982 aa18.51■□□□□ 0.55
C9orf3-217ENST00000479161 C19orf81C9J6K1 198 aa18.51■□□□□ 0.55
C9orf3-217ENST00000479161 IFNL3Q8IZI9 196 aa18.51■□□□□ 0.55
C9orf3-217ENST00000479161 PROCA1Q8NCQ7 364 aaPredicted RBP18.51■□□□□ 0.55
C9orf3-217ENST00000479161 RILPL2Q969X0 211 aa18.51■□□□□ 0.55
C9orf3-217ENST00000479161 SEC62Q99442 399 aaKnown RBP18.51■□□□□ 0.55
C9orf3-217ENST00000479161 ZMYM6O95789 1325 aa18.5■□□□□ 0.55
C9orf3-217ENST00000479161 BTBD19C9JJ37 291 aa18.5■□□□□ 0.55
C9orf3-217ENST00000479161 ZNF287Q9HBT7 754 aa18.5■□□□□ 0.55
C9orf3-217ENST00000479161 EPB41L4AQ9HCS5 686 aaPredicted RBP18.5■□□□□ 0.55
C9orf3-217ENST00000479161 CABP5Q9NP86 173 aa18.5■□□□□ 0.55
C9orf3-217ENST00000479161 LOC285556D6RIA3 1793 aa18.5■□□□□ 0.55
C9orf3-217ENST00000479161 ABCB5Q2M3G0 1257 aa18.49■□□□□ 0.55
C9orf3-217ENST00000479161 FAM43AQ8N2R8 423 aa18.49■□□□□ 0.55
C9orf3-217ENST00000479161 GPR25O00155 361 aa18.48■□□□□ 0.55
C9orf3-217ENST00000479161 GH2P01242 217 aa18.48■□□□□ 0.55
C9orf3-217ENST00000479161 CYP2D6P10635 497 aa18.48■□□□□ 0.55
C9orf3-217ENST00000479161 GSPT1P15170 499 aaKnown RBP18.48■□□□□ 0.55
C9orf3-217ENST00000479161 TDO2P48775 406 aa18.48■□□□□ 0.55
C9orf3-217ENST00000479161 CDK8P49336 464 aa18.48■□□□□ 0.55
C9orf3-217ENST00000479161 BACE1P56817 501 aa18.48■□□□□ 0.55
C9orf3-217ENST00000479161 JAG1P78504 1218 aa18.48■□□□□ 0.55
C9orf3-217ENST00000479161 SPP2Q13103 211 aa18.48■□□□□ 0.55
C9orf3-217ENST00000479161 GPAT2Q6NUI2 795 aa18.48■□□□□ 0.55
C9orf3-217ENST00000479161 TMEM179Q6ZVK1 233 aa18.48■□□□□ 0.55
C9orf3-217ENST00000479161 CCDC136Q96JN2 1154 aa18.48■□□□□ 0.55
C9orf3-217ENST00000479161 FAM227BQ96M60 508 aa18.48■□□□□ 0.55
C9orf3-217ENST00000479161 ZFYVE28Q9HCC9 887 aa18.48■□□□□ 0.55
C9orf3-217ENST00000479161 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.48■□□□□ 0.55
C9orf3-217ENST00000479161 A0A0D9SFI3 127 aa18.47■□□□□ 0.55
C9orf3-217ENST00000479161 USP17L10C9JJH3 530 aa18.47■□□□□ 0.55
C9orf3-217ENST00000479161 FOXP2O15409 715 aa18.47■□□□□ 0.55
C9orf3-217ENST00000479161 TBC1D8O95759 1140 aa18.47■□□□□ 0.55
C9orf3-217ENST00000479161 APPP05067 770 aa18.47■□□□□ 0.55
C9orf3-217ENST00000479161 NMIQ13287 307 aaPredicted RBP18.47■□□□□ 0.55
C9orf3-217ENST00000479161 CRHR2Q13324 411 aa18.47■□□□□ 0.55
C9orf3-217ENST00000479161 SLC4A8Q2Y0W8 1093 aa18.47■□□□□ 0.55
C9orf3-217ENST00000479161 NAPBQ9H115 298 aa18.47■□□□□ 0.55
C9orf3-217ENST00000479161 ANAPC4Q9UJX5 808 aa18.47■□□□□ 0.55
C9orf3-217ENST00000479161 AGTPBP1Q9UPW5 1226 aa18.47■□□□□ 0.55
C9orf3-217ENST00000479161 CCDC171Q6TFL3 1326 aa18.47■□□□□ 0.55
C9orf3-217ENST00000479161 TRIM75PA6NK02 468 aa18.46■□□□□ 0.55
C9orf3-217ENST00000479161 TLR2O60603 784 aa18.46■□□□□ 0.55
C9orf3-217ENST00000479161 GDF11O95390 407 aa18.46■□□□□ 0.55
C9orf3-217ENST00000479161 SLC3A2P08195 630 aaKnown RBP18.46■□□□□ 0.55
C9orf3-217ENST00000479161 NT5C2P49902 561 aa18.46■□□□□ 0.55
C9orf3-217ENST00000479161 PABPC4Q13310 644 aaKnown RBP eCLIP18.46■□□□□ 0.55
C9orf3-217ENST00000479161 TAF1CQ15572 869 aaPredicted RBP18.46■□□□□ 0.55
C9orf3-217ENST00000479161 C12orf42Q96LP6 360 aa18.46■□□□□ 0.55
C9orf3-217ENST00000479161 KIAA1683Q9H0B3 1180 aa18.46■□□□□ 0.55
C9orf3-217ENST00000479161 DIAPH3Q9NSV4 1193 aa18.46■□□□□ 0.55
C9orf3-217ENST00000479161 GREB1LQ9C091 1923 aaPredicted RBP18.46■□□□□ 0.55
C9orf3-217ENST00000479161 PDHXO00330 501 aa18.45■□□□□ 0.54
C9orf3-217ENST00000479161 HSPD1P10809 573 aaKnown RBP18.45■□□□□ 0.54
C9orf3-217ENST00000479161 HOXA7P31268 230 aaPredicted RBP18.45■□□□□ 0.54
C9orf3-217ENST00000479161 GUCY1A2P33402 732 aa18.45■□□□□ 0.54
C9orf3-217ENST00000479161 USP14P54578 494 aa18.45■□□□□ 0.54
C9orf3-217ENST00000479161 EVX2Q03828 476 aa18.45■□□□□ 0.54
C9orf3-217ENST00000479161 DYNLL2Q96FJ2 89 aa18.45■□□□□ 0.54
C9orf3-217ENST00000479161 TSKSQ9UJT2 592 aa18.45■□□□□ 0.54
C9orf3-217ENST00000479161 RAD50Q92878 1312 aa18.45■□□□□ 0.54
C9orf3-217ENST00000479161 CYP2D7A0A087X1C5 515 aa18.44■□□□□ 0.54
C9orf3-217ENST00000479161 FKTNO75072 461 aa18.44■□□□□ 0.54
C9orf3-217ENST00000479161 CAPN15O75808 1086 aa18.44■□□□□ 0.54
C9orf3-217ENST00000479161 FGRP09769 529 aa18.44■□□□□ 0.54
C9orf3-217ENST00000479161 PCP11498 1178 aaKnown RBP18.44■□□□□ 0.54
C9orf3-217ENST00000479161 SLC44A5Q8NCS7 719 aa18.44■□□□□ 0.54
C9orf3-217ENST00000479161 ZNF296Q8WUU4 475 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-217ENST00000479161 PARK7Q99497 189 aaKnown RBP18.44■□□□□ 0.54
C9orf3-217ENST00000479161 R3HDMLQ9H3Y0 253 aa18.44■□□□□ 0.54
C9orf3-217ENST00000479161 PNMA3Q9UL41 463 aa18.44■□□□□ 0.54
C9orf3-217ENST00000479161 ADGRA2Q96PE1 1338 aa18.44■□□□□ 0.54
C9orf3-217ENST00000479161 MINDY4BA8MYZ0 360 aa18.43■□□□□ 0.54
C9orf3-217ENST00000479161 FGAP02671 866 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms