RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 SBNO1A3KN83 1393 aa23.93■■□□□ 1.42
SDF4-206ENST00000478938 A0A0G2JLW4 131 aa23.93■■□□□ 1.42
SDF4-206ENST00000478938 SEC24CP53992 1094 aa23.93■■□□□ 1.42
SDF4-206ENST00000478938 SLC39A14Q15043 492 aa23.93■■□□□ 1.42
SDF4-206ENST00000478938 FUKQ8N0W3 1084 aa23.93■■□□□ 1.42
SDF4-206ENST00000478938 ZBTB10Q96DT7 871 aa23.93■■□□□ 1.42
SDF4-206ENST00000478938 TEFQ10587 303 aa23.92■■□□□ 1.42
SDF4-206ENST00000478938 SLC9C2Q5TAH2 1124 aa23.92■■□□□ 1.42
SDF4-206ENST00000478938 NBPF14Q5TI25 921 aa23.92■■□□□ 1.42
SDF4-206ENST00000478938 THOC1Q96FV9 657 aaKnown RBP23.92■■□□□ 1.42
SDF4-206ENST00000478938 PAGR1Q9BTK6 254 aa23.92■■□□□ 1.42
SDF4-206ENST00000478938 PI4KAP2A4QPH2 592 aa23.92■■□□□ 1.42
SDF4-206ENST00000478938 SPRED3Q2MJR0 410 aa23.92■■□□□ 1.42
SDF4-206ENST00000478938 ACCSLQ4AC99 568 aa23.92■■□□□ 1.42
SDF4-206ENST00000478938 PI4KAP1Q8N8J0 262 aa23.92■■□□□ 1.42
SDF4-206ENST00000478938 ENOX1Q8TC92 643 aaKnown RBP23.92■■□□□ 1.42
SDF4-206ENST00000478938 EPN3Q9H201 632 aa23.92■■□□□ 1.42
SDF4-206ENST00000478938 SETD1BQ9UPS6 1966 aaKnown RBP23.91■■□□□ 1.42
SDF4-206ENST00000478938 OPA1O60313 960 aa23.91■■□□□ 1.42
SDF4-206ENST00000478938 NBPF9Q3BBW0 867 aa23.91■■□□□ 1.42
SDF4-206ENST00000478938 CCDC102BQ68D86 513 aa23.91■■□□□ 1.42
SDF4-206ENST00000478938 BRAPQ7Z569 592 aa23.91■■□□□ 1.42
SDF4-206ENST00000478938 RNPC3Q96LT9 517 aaKnown RBP23.91■■□□□ 1.42
SDF4-206ENST00000478938 OPLAHO14841 1288 aa23.91■■□□□ 1.42
SDF4-206ENST00000478938 GYPCP04921 128 aa23.91■■□□□ 1.42
SDF4-206ENST00000478938 C2orf54Q08AI8 447 aa23.91■■□□□ 1.42
SDF4-206ENST00000478938 TSEN2Q8NCE0 465 aaKnown RBP23.91■■□□□ 1.42
SDF4-206ENST00000478938 GPHNQ9NQX3 736 aaPredicted RBP23.91■■□□□ 1.42
SDF4-206ENST00000478938 ZBTB12Q9Y330 459 aaPredicted RBP23.91■■□□□ 1.42
SDF4-206ENST00000478938 LAMA4Q16363 1823 aa23.9■■□□□ 1.42
SDF4-206ENST00000478938 APBA1Q02410 837 aa23.9■■□□□ 1.42
SDF4-206ENST00000478938 APTXQ7Z2E3 356 aaKnown RBP23.9■■□□□ 1.42
SDF4-206ENST00000478938 BSDC1Q9NW68 430 aaPredicted RBP23.9■■□□□ 1.42
SDF4-206ENST00000478938 SAR1BQ9Y6B6 198 aa23.9■■□□□ 1.42
SDF4-206ENST00000478938 ZNF609O15014 1411 aa23.9■■□□□ 1.42
SDF4-206ENST00000478938 ENO4A6NNW6 628 aa23.9■■□□□ 1.42
SDF4-206ENST00000478938 EIF2S2P20042 333 aaKnown RBP23.9■■□□□ 1.42
SDF4-206ENST00000478938 MRPS25P82663 173 aaKnown RBP23.9■■□□□ 1.42
SDF4-206ENST00000478938 EXOSC10Q01780 885 aaKnown RBP23.9■■□□□ 1.42
SDF4-206ENST00000478938 CAGE1Q8TC20 777 aa23.9■■□□□ 1.42
SDF4-206ENST00000478938 ITFG2Q969R8 447 aa23.9■■□□□ 1.42
SDF4-206ENST00000478938 TFR2Q9UP52 801 aa23.9■■□□□ 1.42
SDF4-206ENST00000478938 KIF23Q02241 960 aaPredicted RBP23.89■■□□□ 1.42
SDF4-206ENST00000478938 ICA1Q05084 483 aa23.89■■□□□ 1.42
SDF4-206ENST00000478938 EZH2Q15910 746 aaKnown RBP23.89■■□□□ 1.42
SDF4-206ENST00000478938 FKBP15Q5T1M5 1219 aa23.89■■□□□ 1.42
SDF4-206ENST00000478938 RAB11FIP4Q86YS3 637 aa23.89■■□□□ 1.42
SDF4-206ENST00000478938 LMBR1Q8WVP7 490 aa23.89■■□□□ 1.42
SDF4-206ENST00000478938 IRAK4Q9NWZ3 460 aa23.89■■□□□ 1.42
SDF4-206ENST00000478938 CEMIPQ8WUJ3 1361 aa23.89■■□□□ 1.41
SDF4-206ENST00000478938 PDE2AO00408 941 aaPredicted RBP23.89■■□□□ 1.41
SDF4-206ENST00000478938 ZNF185O15231 689 aa23.89■■□□□ 1.41
SDF4-206ENST00000478938 SPECC1Q5M775 1068 aa23.89■■□□□ 1.41
SDF4-206ENST00000478938 CCT8L2Q96SF2 557 aa23.89■■□□□ 1.41
SDF4-206ENST00000478938 WWC3Q9ULE0 1092 aa23.89■■□□□ 1.41
SDF4-206ENST00000478938 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.89■■□□□ 1.41
SDF4-206ENST00000478938 MYH8P13535 1937 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 HMGB1P09429 215 aaKnown RBP23.88■■□□□ 1.41
SDF4-206ENST00000478938 SNX1Q13596 522 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 KCNB1Q14721 858 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 RESP18Q5W5W9 173 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 CDCA2Q69YH5 1023 aaPredicted RBP23.88■■□□□ 1.41
SDF4-206ENST00000478938 MYCBPAPQ8TBZ2 947 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 HDAC7Q8WUI4 952 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 RUFY1Q96T51 708 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 CPSF2Q9P2I0 782 aaKnown RBP23.88■■□□□ 1.41
SDF4-206ENST00000478938 CACNA1FO60840 1977 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 CDC25AP30304 524 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 PBX1P40424 430 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 SLC8A3P57103 927 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 PTGISQ16647 500 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 RCSD1Q6JBY9 416 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 TICAM2Q86XR7 235 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 AGXT2Q9BYV1 514 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 KCNH3Q9ULD8 1083 aa23.88■■□□□ 1.41
SDF4-206ENST00000478938 KDM6AO15550 1401 aaPredicted RBP23.87■■□□□ 1.41
SDF4-206ENST00000478938 SIGLEC1Q9BZZ2 1709 aa23.87■■□□□ 1.41
SDF4-206ENST00000478938 CAND2O75155 1236 aa23.87■■□□□ 1.41
SDF4-206ENST00000478938 EPB41P11171 864 aaKnown RBP23.87■■□□□ 1.41
SDF4-206ENST00000478938 RBM5P52756 815 aaKnown RBP eCLIP23.87■■□□□ 1.418e-6■■■■□ 20.7
SDF4-206ENST00000478938 NLRP14Q86W24 1093 aa23.87■■□□□ 1.41
SDF4-206ENST00000478938 CCDC50Q8IVM0 306 aa23.87■■□□□ 1.41
SDF4-206ENST00000478938 GRAMD1CQ8IYS0 662 aa23.87■■□□□ 1.41
SDF4-206ENST00000478938 MAGEC3Q8TD91 643 aa23.87■■□□□ 1.41
SDF4-206ENST00000478938 GOLGA6L7A0A1B0GV03 622 aa23.87■■□□□ 1.41
SDF4-206ENST00000478938 RNF225M0QZC1 329 aaPredicted RBP23.87■■□□□ 1.41
SDF4-206ENST00000478938 RAPGEF3O95398 923 aa23.87■■□□□ 1.41
SDF4-206ENST00000478938 ANXA1P04083 346 aa23.87■■□□□ 1.41
SDF4-206ENST00000478938 NNTQ13423 1086 aa23.87■■□□□ 1.41
SDF4-206ENST00000478938 CNGA4Q8IV77 575 aa23.87■■□□□ 1.41
SDF4-206ENST00000478938 ZNF526Q8TF50 670 aaPredicted RBP23.87■■□□□ 1.41
SDF4-206ENST00000478938 ZMYM6O95789 1325 aa23.87■■□□□ 1.41
SDF4-206ENST00000478938 DNM1LO00429 736 aa23.86■■□□□ 1.41
SDF4-206ENST00000478938 MDM2Q00987 491 aaPredicted RBP23.86■■□□□ 1.41
SDF4-206ENST00000478938 CCDC121Q6ZUS5 278 aa23.86■■□□□ 1.41
SDF4-206ENST00000478938 TMTC1Q8IUR5 882 aa23.86■■□□□ 1.41
SDF4-206ENST00000478938 MAB21L3Q8N8X9 362 aa23.86■■□□□ 1.41
SDF4-206ENST00000478938 TBC1D31Q96DN5 1066 aa23.86■■□□□ 1.41
SDF4-206ENST00000478938 ZNF274Q96GC6 653 aaPredicted RBP23.86■■□□□ 1.41
SDF4-206ENST00000478938 REXO2Q9Y3B8 237 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms