RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 PCDHB5Q9Y5E4 795 aa6.19□□□□□ -1.42
GPNMB-210ENST00000478451 RLBP1P12271 317 aa6.18□□□□□ -1.42
GPNMB-210ENST00000478451 CDC37L1Q7L3B6 337 aa6.18□□□□□ -1.42
GPNMB-210ENST00000478451 CYFIP1Q7L576 1253 aa6.18□□□□□ -1.42
GPNMB-210ENST00000478451 KCT2Q8NC54 265 aa6.18□□□□□ -1.42
GPNMB-210ENST00000478451 BCL2L13Q9BXK5 485 aa6.18□□□□□ -1.42
GPNMB-210ENST00000478451 SNCAIPQ9Y6H5 919 aa6.18□□□□□ -1.42
GPNMB-210ENST00000478451 USP31Q70CQ4 1352 aa6.18□□□□□ -1.42
GPNMB-210ENST00000478451 RAPGEF2Q9Y4G8 1499 aa6.17□□□□□ -1.42
GPNMB-210ENST00000478451 JUNBP17275 347 aaPredicted RBP6.17□□□□□ -1.42
GPNMB-210ENST00000478451 TFE3P19532 575 aaPredicted RBP6.17□□□□□ -1.42
GPNMB-210ENST00000478451 ITGAEP38570 1179 aa6.17□□□□□ -1.42
GPNMB-210ENST00000478451 CDK8P49336 464 aa6.17□□□□□ -1.42
GPNMB-210ENST00000478451 CBLL1Q75N03 491 aa6.17□□□□□ -1.42
GPNMB-210ENST00000478451 FAM181AQ8N9Y4 354 aa6.17□□□□□ -1.42
GPNMB-210ENST00000478451 ZNF507Q8TCN5 953 aa6.17□□□□□ -1.42
GPNMB-210ENST00000478451 MIR1-1HGQ9H1L0 117 aa6.17□□□□□ -1.42
GPNMB-210ENST00000478451 ARMCX6Q7L4S7 300 aa6.16□□□□□ -1.42
GPNMB-210ENST00000478451 ABI1Q8IZP0 508 aa6.16□□□□□ -1.42
GPNMB-210ENST00000478451 GIPC2Q8TF65 315 aa6.16□□□□□ -1.42
GPNMB-210ENST00000478451 WNT10AQ9GZT5 417 aa6.16□□□□□ -1.42
GPNMB-210ENST00000478451 FBRSQ9HAH7 460 aa6.16□□□□□ -1.42
GPNMB-210ENST00000478451 PRDM10Q9NQV6 1147 aa6.16□□□□□ -1.42
GPNMB-210ENST00000478451 TLR6Q9Y2C9 796 aa6.16□□□□□ -1.42
GPNMB-210ENST00000478451 U3KQE9 123 aa6.16□□□□□ -1.42
GPNMB-210ENST00000478451 NCAPD3P42695 1498 aa6.15□□□□□ -1.42
GPNMB-210ENST00000478451 PRXQ9BXM0 1461 aa6.15□□□□□ -1.42
GPNMB-210ENST00000478451 LRIG2O94898 1065 aa6.15□□□□□ -1.42
GPNMB-210ENST00000478451 ITGB5P18084 799 aa6.15□□□□□ -1.42
GPNMB-210ENST00000478451 ETF1P62495 437 aaKnown RBP6.15□□□□□ -1.42
GPNMB-210ENST00000478451 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
GPNMB-210ENST00000478451 NFXL1Q6ZNB6 911 aa6.15□□□□□ -1.42
GPNMB-210ENST00000478451 ARHGAP27Q6ZUM4 889 aa6.15□□□□□ -1.42
GPNMB-210ENST00000478451 PLD6Q8N2A8 252 aaKnown RBP6.15□□□□□ -1.42
GPNMB-210ENST00000478451 PHC3Q8NDX5 983 aa6.15□□□□□ -1.42
GPNMB-210ENST00000478451 FLCNQ8NFG4 579 aa6.15□□□□□ -1.42
GPNMB-210ENST00000478451 NETO1Q8TDF5 533 aa6.15□□□□□ -1.42
GPNMB-210ENST00000478451 FBXL18Q96ME1 805 aa6.15□□□□□ -1.42
GPNMB-210ENST00000478451 KIF27Q86VH2 1401 aa6.15□□□□□ -1.43
GPNMB-210ENST00000478451 CFAP43Q8NDM7 1665 aa6.14□□□□□ -1.43
GPNMB-210ENST00000478451 F6X3S4 739 aa6.14□□□□□ -1.43
GPNMB-210ENST00000478451 GFRA2O00451 464 aa6.14□□□□□ -1.43
GPNMB-210ENST00000478451 CEACAM5P06731 702 aa6.14□□□□□ -1.43
GPNMB-210ENST00000478451 OXCT1P55809 520 aa6.14□□□□□ -1.43
GPNMB-210ENST00000478451 SLBPQ14493 270 aaKnown RBP eCLIP6.14□□□□□ -1.43
GPNMB-210ENST00000478451 TSNAXIP1Q2TAA8 658 aa6.14□□□□□ -1.43
GPNMB-210ENST00000478451 ZNF326Q5BKZ1 582 aaKnown RBP6.14□□□□□ -1.43
GPNMB-210ENST00000478451 MKNK2Q9HBH9 465 aa6.14□□□□□ -1.43
GPNMB-210ENST00000478451 TACC3Q9Y6A5 838 aa6.14□□□□□ -1.43
GPNMB-210ENST00000478451 MAP3K1Q13233 1512 aa6.14□□□□□ -1.43
GPNMB-210ENST00000478451 ITIH2P19823 946 aa6.13□□□□□ -1.43
GPNMB-210ENST00000478451 GRK4P32298 578 aa6.13□□□□□ -1.43
GPNMB-210ENST00000478451 NKG7Q16617 165 aa6.13□□□□□ -1.43
GPNMB-210ENST00000478451 HID1Q8IV36 788 aa6.13□□□□□ -1.43
GPNMB-210ENST00000478451 TP53INP2Q8IXH6 220 aa6.13□□□□□ -1.43
GPNMB-210ENST00000478451 STK11IPQ8N1F8 1099 aa6.13□□□□□ -1.43
GPNMB-210ENST00000478451 BCL7CQ8WUZ0 217 aaPredicted RBP6.13□□□□□ -1.43
GPNMB-210ENST00000478451 JARID2Q92833 1246 aaPredicted RBP6.13□□□□□ -1.43
GPNMB-210ENST00000478451 HEXIM2Q96MH2 286 aaKnown RBP6.13□□□□□ -1.43
GPNMB-210ENST00000478451 FOXQ1Q9C009 403 aa6.13□□□□□ -1.43
GPNMB-210ENST00000478451 GTF2IRD1Q9UHL9 959 aa6.13□□□□□ -1.43
GPNMB-210ENST00000478451 SLC5A6Q9Y289 635 aa6.13□□□□□ -1.43
GPNMB-210ENST00000478451 TTBK1Q5TCY1 1321 aaPredicted RBP6.13□□□□□ -1.43
GPNMB-210ENST00000478451 ARAP1Q96P48 1450 aa6.13□□□□□ -1.43
GPNMB-210ENST00000478451 CUX1P39880 1505 aa6.13□□□□□ -1.43
GPNMB-210ENST00000478451 CTTNBP2Q8WZ74 1663 aa6.13□□□□□ -1.43
GPNMB-210ENST00000478451 CAP2P40123 477 aa6.12□□□□□ -1.43
GPNMB-210ENST00000478451 RPL6Q02878 288 aaKnown RBP6.12□□□□□ -1.43
GPNMB-210ENST00000478451 IFI16Q16666 785 aaKnown RBP6.12□□□□□ -1.43
GPNMB-210ENST00000478451 ZNF574Q6ZN55 896 aaPredicted RBP6.12□□□□□ -1.43
GPNMB-210ENST00000478451 FAM214BQ7L5A3 538 aa6.12□□□□□ -1.43
GPNMB-210ENST00000478451 MISP3Q96FF7 219 aa6.12□□□□□ -1.43
GPNMB-210ENST00000478451 RHOVQ96L33 236 aa6.12□□□□□ -1.43
GPNMB-210ENST00000478451 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
GPNMB-210ENST00000478451 BCL11AQ9H165 835 aa6.12□□□□□ -1.43
GPNMB-210ENST00000478451 PAK6Q9NQU5 681 aaPredicted RBP6.12□□□□□ -1.43
GPNMB-210ENST00000478451 CUX2O14529 1486 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 CFTRP13569 1480 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 NCANO14594 1321 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 IGF2BP3O00425 579 aaKnown RBP eCLIP6.11□□□□□ -1.43
GPNMB-210ENST00000478451 SLITRK5O94991 958 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 EOMESO95936 686 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 PF4P02776 101 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 PGRP06401 933 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 GBP2P32456 591 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-210ENST00000478451 RBM25P49756 843 aaKnown RBP6.11□□□□□ -1.43
GPNMB-210ENST00000478451 LMNB2Q03252 620 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 CAMK2GQ13555 558 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-210ENST00000478451 PWP1Q13610 501 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 MRPL58Q14197 206 aaKnown RBP6.11□□□□□ -1.43
GPNMB-210ENST00000478451 PRAMEF13Q5VWM6 474 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 BNC2Q6ZN30 1099 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-210ENST00000478451 CCDC84Q86UT8 332 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-210ENST00000478451 WFDC3Q8IUB2 231 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 RELL1Q8IUW5 271 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 MFSD2AQ8NA29 543 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 AGBL5Q8NDL9 886 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 TMEM74Q96NL1 305 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 MIPEPQ99797 713 aa6.11□□□□□ -1.43
GPNMB-210ENST00000478451 RSRP1Q9BUV0 290 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms