RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	ASNS	P08243	561 aa		13.1	□□□□□ -0.31
APTX-222	ENST00000478279	PLEKHH3	Q7Z736	793 aa		13.1	□□□□□ -0.31
APTX-222	ENST00000478279	TEX11	Q8IYF3	940 aa		13.1	□□□□□ -0.31
APTX-222	ENST00000478279	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.1	□□□□□ -0.31
APTX-222	ENST00000478279	XAGE2	Q96GT9	111 aa		13.1	□□□□□ -0.31
APTX-222	ENST00000478279	CDX2	Q99626	313 aa	Predicted RBP	13.1	□□□□□ -0.31
APTX-222	ENST00000478279	APBA2	Q99767	749 aa		13.1	□□□□□ -0.31
APTX-222	ENST00000478279	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.1	□□□□□ -0.31
APTX-222	ENST00000478279	PORCN	Q9H237	461 aa		13.1	□□□□□ -0.31
APTX-222	ENST00000478279	PRDM6	Q9NQX0	595 aa		13.1	□□□□□ -0.31
APTX-222	ENST00000478279	PI4KB	Q9UBF8	816 aa		13.1	□□□□□ -0.31
APTX-222	ENST00000478279	MUC3A	Q02505	3323 aa		13.1	□□□□□ -0.31
APTX-222	ENST00000478279		A0A1B0GUL7	405 aa		13.09	□□□□□ -0.31
APTX-222	ENST00000478279	USP17L10	C9JJH3	530 aa		13.09	□□□□□ -0.31
APTX-222	ENST00000478279	MAP2K5	Q13163	448 aa		13.09	□□□□□ -0.31
APTX-222	ENST00000478279	MVP	Q14764	893 aa	Known RBP	13.09	□□□□□ -0.31
APTX-222	ENST00000478279	PAGR1	Q9BTK6	254 aa		13.09	□□□□□ -0.31
APTX-222	ENST00000478279	GINM1	Q9NU53	330 aa		13.09	□□□□□ -0.31
APTX-222	ENST00000478279	PRKAG2	Q9UGJ0	569 aa		13.09	□□□□□ -0.31
APTX-222	ENST00000478279	HDAC5	Q9UQL6	1122 aa		13.09	□□□□□ -0.31
APTX-222	ENST00000478279	AKAP2	Q9Y2D5	859 aa		13.09	□□□□□ -0.31
APTX-222	ENST00000478279	MAST2	Q6P0Q8	1798 aa		13.08	□□□□□ -0.32
APTX-222	ENST00000478279	JAG1	P78504	1218 aa		13.08	□□□□□ -0.32
APTX-222	ENST00000478279	MFSD14C	Q5VZR4	134 aa		13.08	□□□□□ -0.32
APTX-222	ENST00000478279	MAFA	Q8NHW3	353 aa	Predicted RBP	13.08	□□□□□ -0.32
APTX-222	ENST00000478279	EDC3	Q96F86	508 aa	Known RBP	13.08	□□□□□ -0.32
APTX-222	ENST00000478279	DHX36	Q9H2U1	1008 aa	Known RBP	13.08	□□□□□ -0.32
APTX-222	ENST00000478279	SEMA6B	Q9H3T3	888 aa		13.08	□□□□□ -0.32
APTX-222	ENST00000478279	CWC22	Q9HCG8	908 aa	Known RBP	13.08	□□□□□ -0.32
APTX-222	ENST00000478279	RAI14	Q9P0K7	980 aa		13.08	□□□□□ -0.32
APTX-222	ENST00000478279	HMG20B	Q9P0W2	317 aa		13.08	□□□□□ -0.32
APTX-222	ENST00000478279	FRMPD3	Q5JV73	1810 aa		13.08	□□□□□ -0.32
APTX-222	ENST00000478279	ZNF521	Q96K83	1311 aa		13.08	□□□□□ -0.32
APTX-222	ENST00000478279	MSC	O60682	206 aa		13.07	□□□□□ -0.32
APTX-222	ENST00000478279	GLRX3	O76003	335 aa	Known RBP	13.07	□□□□□ -0.32
APTX-222	ENST00000478279	ATN1	P54259	1190 aa	Predicted RBP	13.07	□□□□□ -0.32
APTX-222	ENST00000478279	POTEE	Q6S8J3	1075 aa		13.07	□□□□□ -0.32
APTX-222	ENST00000478279	TBC1D9	Q6ZT07	1266 aa		13.07	□□□□□ -0.32
APTX-222	ENST00000478279	METTL16	Q86W50	562 aa	Known RBP	13.07	□□□□□ -0.32
APTX-222	ENST00000478279	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.07	□□□□□ -0.32
APTX-222	ENST00000478279	SPATA5	Q8NB90	893 aa		13.07	□□□□□ -0.32
APTX-222	ENST00000478279	LPAR1	Q92633	364 aa		13.07	□□□□□ -0.32
APTX-222	ENST00000478279	EMILIN3	Q9NT22	766 aa		13.07	□□□□□ -0.32
APTX-222	ENST00000478279	DDX20	Q9UHI6	824 aa	Known RBP	13.07	□□□□□ -0.32
APTX-222	ENST00000478279	SIPA1L1	O43166	1804 aa		13.06	□□□□□ -0.32
APTX-222	ENST00000478279	DNM1L	O00429	736 aa		13.06	□□□□□ -0.32
APTX-222	ENST00000478279	RTP1	P59025	263 aa		13.06	□□□□□ -0.32
APTX-222	ENST00000478279	TFCP2	Q12800	502 aa		13.06	□□□□□ -0.32
APTX-222	ENST00000478279	SHH	Q15465	462 aa		13.06	□□□□□ -0.32
APTX-222	ENST00000478279	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.06	□□□□□ -0.32
APTX-222	ENST00000478279	SYMPK	Q92797	1274 aa	Known RBP	13.06	□□□□□ -0.32
APTX-222	ENST00000478279	NEUROD6	Q96NK8	337 aa		13.06	□□□□□ -0.32
APTX-222	ENST00000478279	NOL10	Q9BSC4	688 aa	Known RBP	13.06	□□□□□ -0.32
APTX-222	ENST00000478279	DNAJC18	Q9H819	358 aa		13.06	□□□□□ -0.32
APTX-222	ENST00000478279	FLRT1	Q9NZU1	646 aa		13.06	□□□□□ -0.32
APTX-222	ENST00000478279	ZBTB21	Q9ULJ3	1066 aa		13.06	□□□□□ -0.32
APTX-222	ENST00000478279	RABGAP1	Q9Y3P9	1069 aa		13.06	□□□□□ -0.32
APTX-222	ENST00000478279	LTBP2	Q14767	1821 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	SLC15A5	A6NIM6	579 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	GDF11	O95390	407 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	HOXC6	P09630	235 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	PTPRE	P23469	700 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	CNGA1	P29973	690 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	CCNA1	P78396	465 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	ATP2B2	Q01814	1243 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.05	□□□□□ -0.32
APTX-222	ENST00000478279	ALDH1L2	Q3SY69	923 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	GORAB	Q5T7V8	394 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	USP17L2	Q6R6M4	530 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	PI16	Q6UXB8	463 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.05	□□□□□ -0.32
APTX-222	ENST00000478279	MYLIP	Q8WY64	445 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	TRIM34	Q9BYJ4	488 aa		13.05	□□□□□ -0.32
APTX-222	ENST00000478279	CNMD	O75829	334 aa		13.04	□□□□□ -0.32
APTX-222	ENST00000478279	BAG3	O95817	575 aa		13.04	□□□□□ -0.32
APTX-222	ENST00000478279	PLCG2	P16885	1265 aa		13.04	□□□□□ -0.32
APTX-222	ENST00000478279	ARID4A	P29374	1257 aa	Predicted RBP	13.04	□□□□□ -0.32
APTX-222	ENST00000478279	PPP4C	P60510	307 aa		13.04	□□□□□ -0.32
APTX-222	ENST00000478279	SMAD3	P84022	425 aa	Known RBP	13.04	□□□□□ -0.32
APTX-222	ENST00000478279	C9orf50	Q5SZB4	431 aa		13.04	□□□□□ -0.32
APTX-222	ENST00000478279	MAPKAPK5	Q8IW41	473 aa		13.04	□□□□□ -0.32
APTX-222	ENST00000478279	FAM9B	Q8IZU0	186 aa		13.04	□□□□□ -0.32
APTX-222	ENST00000478279	C12orf42	Q96LP6	360 aa		13.04	□□□□□ -0.32
APTX-222	ENST00000478279	TTYH1	Q9H313	450 aa	Predicted RBP	13.04	□□□□□ -0.32
APTX-222	ENST00000478279	LRP2BP	Q9P2M1	347 aa		13.04	□□□□□ -0.32
APTX-222	ENST00000478279	ATP11B	Q9Y2G3	1177 aa		13.04	□□□□□ -0.32
APTX-222	ENST00000478279	NDUFB9	Q9Y6M9	179 aa		13.04	□□□□□ -0.32
APTX-222	ENST00000478279	NCOR1	O75376	2440 aa		13.04	□□□□□ -0.32
APTX-222	ENST00000478279	USP17L15	C9J2P7	530 aa		13.03	□□□□□ -0.32
APTX-222	ENST00000478279	USP17L13	C9JLJ4	530 aa		13.03	□□□□□ -0.32
APTX-222	ENST00000478279	USP17L11	C9JVI0	530 aa		13.03	□□□□□ -0.32
APTX-222	ENST00000478279	USP17L18	D6R9N7	530 aa		13.03	□□□□□ -0.32
APTX-222	ENST00000478279	USP17L22	D6RA61	530 aa		13.03	□□□□□ -0.32
APTX-222	ENST00000478279	USP17L17	D6RBQ6	530 aa		13.03	□□□□□ -0.32
APTX-222	ENST00000478279	USP17L19	D6RCP7	530 aa		13.03	□□□□□ -0.32
APTX-222	ENST00000478279	USP17L20	D6RJB6	530 aa		13.03	□□□□□ -0.32
APTX-222	ENST00000478279		E9PSI1	815 aa		13.03	□□□□□ -0.32
APTX-222	ENST00000478279	CYP2C19	P33261	490 aa		13.03	□□□□□ -0.32
APTX-222	ENST00000478279	USP17L24	Q0WX57	530 aa		13.03	□□□□□ -0.32
APTX-222	ENST00000478279	WDR78	Q5VTH9	848 aa		13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms