RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-208ENST00000478216 DHX36Q9H2U1 1008 aaKnown RBP17.49■□□□□ 0.39
RC3H2-208ENST00000478216 AATFQ9NY61 560 aaKnown RBP eCLIP17.49■□□□□ 0.39
RC3H2-208ENST00000478216 PLXNB2O15031 1838 aa17.49■□□□□ 0.39
RC3H2-208ENST00000478216 USP17L10C9JJH3 530 aa17.48■□□□□ 0.39
RC3H2-208ENST00000478216 GDF11O95390 407 aa17.48■□□□□ 0.39
RC3H2-208ENST00000478216 PLCG2P16885 1265 aa17.48■□□□□ 0.39
RC3H2-208ENST00000478216 CCND3P30281 292 aaPredicted RBP17.48■□□□□ 0.39
RC3H2-208ENST00000478216 MAPKAPK5Q8IW41 473 aa17.48■□□□□ 0.39
RC3H2-208ENST00000478216 APBA2Q99767 749 aa17.48■□□□□ 0.39
RC3H2-208ENST00000478216 TXNRD2Q9NNW7 524 aa17.48■□□□□ 0.39
RC3H2-208ENST00000478216 C19orf81C9J6K1 198 aa17.47■□□□□ 0.39
RC3H2-208ENST00000478216 GNAI3P08754 354 aa17.47■□□□□ 0.39
RC3H2-208ENST00000478216 HOXA7P31268 230 aaPredicted RBP17.47■□□□□ 0.39
RC3H2-208ENST00000478216 ERVK-9P63128 1117 aa17.47■□□□□ 0.39
RC3H2-208ENST00000478216 ERVK-24P63145 666 aa17.47■□□□□ 0.39
RC3H2-208ENST00000478216 CCL14Q16627 93 aa17.47■□□□□ 0.39
RC3H2-208ENST00000478216 LRRC26Q2I0M4 334 aa17.47■□□□□ 0.39
RC3H2-208ENST00000478216 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
RC3H2-208ENST00000478216 GPR142Q7Z601 462 aa17.47■□□□□ 0.39
RC3H2-208ENST00000478216 PLEKHH3Q7Z736 793 aa17.47■□□□□ 0.39
RC3H2-208ENST00000478216 GTF3C2Q8WUA4 911 aaPredicted RBP17.47■□□□□ 0.39
RC3H2-208ENST00000478216 TGFBRAP1Q8WUH2 860 aa17.47■□□□□ 0.39
RC3H2-208ENST00000478216 FEZ1Q99689 392 aa17.47■□□□□ 0.39
RC3H2-208ENST00000478216 PRKAG2Q9UGJ0 569 aa17.47■□□□□ 0.39
RC3H2-208ENST00000478216 GLRX3O76003 335 aaKnown RBP17.46■□□□□ 0.39
RC3H2-208ENST00000478216 HLA-DOAP06340 250 aa17.46■□□□□ 0.39
RC3H2-208ENST00000478216 UQCRFS1P1P0C7P4 283 aa17.46■□□□□ 0.39
RC3H2-208ENST00000478216 CNGA1P29973 690 aa17.46■□□□□ 0.39
RC3H2-208ENST00000478216 FAM161BQ96MY7 647 aa17.46■□□□□ 0.39
RC3H2-208ENST00000478216 PORCNQ9H237 461 aa17.46■□□□□ 0.39
RC3H2-208ENST00000478216 SAP30BPQ9UHR5 308 aaKnown RBP17.46■□□□□ 0.39
RC3H2-208ENST00000478216 ZBTB21Q9ULJ3 1066 aa17.46■□□□□ 0.39
RC3H2-208ENST00000478216 MAST2Q6P0Q8 1798 aa17.45■□□□□ 0.38
RC3H2-208ENST00000478216 COL6A1P12109 1028 aa17.45■□□□□ 0.38
RC3H2-208ENST00000478216 ARID4AP29374 1257 aaPredicted RBP17.45■□□□□ 0.38
RC3H2-208ENST00000478216 MCAMP43121 646 aa17.45■□□□□ 0.38
RC3H2-208ENST00000478216 G3BP1Q13283 466 aaKnown RBP eCLIP17.45■□□□□ 0.38
RC3H2-208ENST00000478216 ZYXQ15942 572 aaKnown RBP17.45■□□□□ 0.38
RC3H2-208ENST00000478216 TTC39AQ5SRH9 613 aa17.45■□□□□ 0.38
RC3H2-208ENST00000478216 MFSD14CQ5VZR4 134 aa17.45■□□□□ 0.38
RC3H2-208ENST00000478216 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.45■□□□□ 0.38
RC3H2-208ENST00000478216 CDCA7LQ96GN5 454 aa17.45■□□□□ 0.38
RC3H2-208ENST00000478216 SENP6Q9GZR1 1112 aaPredicted RBP17.45■□□□□ 0.38
RC3H2-208ENST00000478216 SNRKQ9NRH2 765 aa17.45■□□□□ 0.38
RC3H2-208ENST00000478216 RBPJLQ9UBG7 517 aa17.45■□□□□ 0.38
RC3H2-208ENST00000478216 NDUFB9Q9Y6M9 179 aa17.45■□□□□ 0.38
RC3H2-208ENST00000478216 FLT1P17948 1338 aa17.45■□□□□ 0.38
RC3H2-208ENST00000478216 CCNA1P78396 465 aa17.44■□□□□ 0.38
RC3H2-208ENST00000478216 SHROOM1Q2M3G4 852 aaPredicted RBP17.44■□□□□ 0.38
RC3H2-208ENST00000478216 USP17L2Q6R6M4 530 aa17.44■□□□□ 0.38
RC3H2-208ENST00000478216 ATF7IPQ6VMQ6 1270 aa17.44■□□□□ 0.38
RC3H2-208ENST00000478216 PALD1Q9ULE6 856 aa17.44■□□□□ 0.38
RC3H2-208ENST00000478216 LAMA3Q16787 3333 aa17.44■□□□□ 0.38
RC3H2-208ENST00000478216 ATN1P54259 1190 aaPredicted RBP17.43■□□□□ 0.38
RC3H2-208ENST00000478216 MAP2K5Q13163 448 aa17.43■□□□□ 0.38
RC3H2-208ENST00000478216 OS9Q13438 667 aaPredicted RBP17.43■□□□□ 0.38
RC3H2-208ENST00000478216 Q3C1V9 767 aa17.43■□□□□ 0.38
RC3H2-208ENST00000478216 ZNF697Q5TEC3 545 aa17.43■□□□□ 0.38
RC3H2-208ENST00000478216 FOXP4Q8IVH2 680 aaPredicted RBP17.43■□□□□ 0.38
RC3H2-208ENST00000478216 COL25A1Q9BXS0 654 aaPredicted RBP17.43■□□□□ 0.38
RC3H2-208ENST00000478216 GINM1Q9NU53 330 aa17.43■□□□□ 0.38
RC3H2-208ENST00000478216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.43■□□□□ 0.38
RC3H2-208ENST00000478216 IVNS1ABPQ9Y6Y0 642 aa17.43■□□□□ 0.38
RC3H2-208ENST00000478216 COL6A3P12111 3177 aa17.42■□□□□ 0.38
RC3H2-208ENST00000478216 SIPA1L1O43166 1804 aa17.42■□□□□ 0.38
RC3H2-208ENST00000478216 JAG1P78504 1218 aa17.42■□□□□ 0.38
RC3H2-208ENST00000478216 CCDC158Q5M9N0 1113 aa17.42■□□□□ 0.38
RC3H2-208ENST00000478216 MORN1Q5T089 497 aa17.42■□□□□ 0.38
RC3H2-208ENST00000478216 LHX8Q68G74 356 aa17.42■□□□□ 0.38
RC3H2-208ENST00000478216 EDC3Q96F86 508 aaKnown RBP17.42■□□□□ 0.38
RC3H2-208ENST00000478216 DNAJC18Q9H819 358 aa17.42■□□□□ 0.38
RC3H2-208ENST00000478216 ZNF316A6NFI3 1004 aaPredicted RBP17.41■□□□□ 0.38
RC3H2-208ENST00000478216 GH2P01242 217 aa17.41■□□□□ 0.38
RC3H2-208ENST00000478216 MYCNP04198 464 aaPredicted RBP17.41■□□□□ 0.38
RC3H2-208ENST00000478216 CT47B1P0C2W7 299 aaPredicted RBP17.41■□□□□ 0.38
RC3H2-208ENST00000478216 ATP2B2Q01814 1243 aa17.41■□□□□ 0.38
RC3H2-208ENST00000478216 MTX1Q13505 466 aa17.41■□□□□ 0.38
RC3H2-208ENST00000478216 USP6NLQ92738 828 aa17.41■□□□□ 0.38
RC3H2-208ENST00000478216 EMILIN3Q9NT22 766 aa17.41■□□□□ 0.38
RC3H2-208ENST00000478216 USP17L15C9J2P7 530 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 USP17L13C9JLJ4 530 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 USP17L11C9JVI0 530 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 USP17L18D6R9N7 530 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 USP17L22D6RA61 530 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 USP17L17D6RBQ6 530 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 USP17L19D6RCP7 530 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 USP17L20D6RJB6 530 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 MSCO60682 206 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 GNAI2P04899 355 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 USP17L24Q0WX57 530 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 RAB3GAP1Q15042 981 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 PRDM5Q9NQX1 630 aaPredicted RBP17.4■□□□□ 0.38
RC3H2-208ENST00000478216 DDX20Q9UHI6 824 aaKnown RBP17.4■□□□□ 0.38
RC3H2-208ENST00000478216 ATP11BQ9Y2G3 1177 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 RABGAP1Q9Y3P9 1069 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 FRMPD3Q5JV73 1810 aa17.4■□□□□ 0.38
RC3H2-208ENST00000478216 USP5P45974 858 aa17.39■□□□□ 0.37
RC3H2-208ENST00000478216 ADGRA1Q86SQ6 560 aa17.39■□□□□ 0.37
RC3H2-208ENST00000478216 GUCD1Q96NT3 240 aa17.39■□□□□ 0.37
RC3H2-208ENST00000478216 SLC15A5A6NIM6 579 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms