RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 CAP2P40123 477 aa17.05■□□□□ 0.32
PDE6D-204ENST00000477748 UBE3CQ15386 1083 aa17.05■□□□□ 0.32
PDE6D-204ENST00000477748 GADL1Q6ZQY3 521 aa17.05■□□□□ 0.32
PDE6D-204ENST00000477748 LCORLQ8N3X6 602 aa17.05■□□□□ 0.32
PDE6D-204ENST00000477748 OTUD7AQ8TE49 926 aaPredicted RBP17.05■□□□□ 0.32
PDE6D-204ENST00000477748 ARMT1Q9H993 441 aa17.05■□□□□ 0.32
PDE6D-204ENST00000477748 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.05■□□□□ 0.32
PDE6D-204ENST00000477748 MBD4O95243 580 aa17.04■□□□□ 0.32
PDE6D-204ENST00000477748 CYP2C8P10632 490 aa17.04■□□□□ 0.32
PDE6D-204ENST00000477748 BCRP11274 1271 aa17.04■□□□□ 0.32
PDE6D-204ENST00000477748 MX1P20591 662 aa17.04■□□□□ 0.32
PDE6D-204ENST00000477748 PSMC4P43686 418 aa17.04■□□□□ 0.32
PDE6D-204ENST00000477748 RRP1BQ14684 758 aaKnown RBP17.04■□□□□ 0.32
PDE6D-204ENST00000477748 HABP4Q5JVS0 413 aaKnown RBP17.04■□□□□ 0.32
PDE6D-204ENST00000477748 TTC6Q86TZ1 520 aa17.04■□□□□ 0.32
PDE6D-204ENST00000477748 CCDC84Q86UT8 332 aaPredicted RBP17.04■□□□□ 0.32
PDE6D-204ENST00000477748 METTL16Q86W50 562 aaKnown RBP17.04■□□□□ 0.32
PDE6D-204ENST00000477748 KBTBD3Q8NAB2 608 aa17.04■□□□□ 0.32
PDE6D-204ENST00000477748 TRIM47Q96LD4 638 aa17.04■□□□□ 0.32
PDE6D-204ENST00000477748 DNAJC18Q9H819 358 aa17.04■□□□□ 0.32
PDE6D-204ENST00000477748 SRRDQ9UH36 339 aa17.04■□□□□ 0.32
PDE6D-204ENST00000477748 AGTPBP1Q9UPW5 1226 aa17.04■□□□□ 0.32
PDE6D-204ENST00000477748 GLRX3O76003 335 aaKnown RBP17.03■□□□□ 0.32
PDE6D-204ENST00000477748 FMNL1O95466 1100 aaPredicted RBP17.03■□□□□ 0.32
PDE6D-204ENST00000477748 CHGBP05060 677 aa17.03■□□□□ 0.32
PDE6D-204ENST00000477748 POLR3DP05423 398 aaPredicted RBP17.03■□□□□ 0.32
PDE6D-204ENST00000477748 FCGRTP55899 365 aa17.03■□□□□ 0.32
PDE6D-204ENST00000477748 SDR42E1Q8WUS8 393 aa17.03■□□□□ 0.32
PDE6D-204ENST00000477748 PNMA3Q9UL41 463 aa17.03■□□□□ 0.32
PDE6D-204ENST00000477748 PTPRFP10586 1907 aa17.03■□□□□ 0.32
PDE6D-204ENST00000477748 PROCA1Q8NCQ7 364 aaPredicted RBP17.02■□□□□ 0.32
PDE6D-204ENST00000477748 ZNF280CQ8ND82 737 aa17.02■□□□□ 0.32
PDE6D-204ENST00000477748 PI4K2BQ8TCG2 481 aa17.02■□□□□ 0.32
PDE6D-204ENST00000477748 SMCR8Q8TEV9 937 aaPredicted RBP17.02■□□□□ 0.32
PDE6D-204ENST00000477748 MCM9Q9NXL9 1143 aa17.02■□□□□ 0.32
PDE6D-204ENST00000477748 SERPINB13Q9UIV8 391 aa17.02■□□□□ 0.32
PDE6D-204ENST00000477748 DDX60LQ5H9U9 1706 aaKnown RBP17.01■□□□□ 0.31
PDE6D-204ENST00000477748 MYPNQ86TC9 1320 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 USP17L5A8MUK1 530 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 PRKAB2O43741 272 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 IGHDP01880 384 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 ASNSP08243 561 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 OSBPP22059 807 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 CTGFP29279 349 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 IRX6P78412 446 aaPredicted RBP17.01■□□□□ 0.31
PDE6D-204ENST00000477748 B4GALNT3Q6L9W6 998 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 SMC5Q8IY18 1101 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 RAET1EQ8TD07 263 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 SH3TC2Q8TF17 1288 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 PUS7LQ9H0K6 701 aaKnown RBP17.01■□□□□ 0.31
PDE6D-204ENST00000477748 EHD4Q9H223 541 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 AS3MTQ9HBK9 375 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 DCP1AQ9NPI6 582 aaPredicted RBP17.01■□□□□ 0.31
PDE6D-204ENST00000477748 GINM1Q9NU53 330 aa17.01■□□□□ 0.31
PDE6D-204ENST00000477748 BAZ2AQ9UIF9 1905 aaKnown RBP17.01■□□□□ 0.31
PDE6D-204ENST00000477748 SALL3Q9BXA9 1300 aa17■□□□□ 0.31
PDE6D-204ENST00000477748 RNF113AO15541 343 aaKnown RBP17■□□□□ 0.31
PDE6D-204ENST00000477748 GDF11O95390 407 aa17■□□□□ 0.31
PDE6D-204ENST00000477748 ZFYP08048 801 aaPredicted RBP17■□□□□ 0.31
PDE6D-204ENST00000477748 PLCD1P51178 756 aa17■□□□□ 0.31
PDE6D-204ENST00000477748 SPP2Q13103 211 aa17■□□□□ 0.31
PDE6D-204ENST00000477748 PABPC4Q13310 644 aaKnown RBP eCLIP17■□□□□ 0.31
PDE6D-204ENST00000477748 LRRFIP1Q32MZ4 808 aaKnown RBP17■□□□□ 0.31
PDE6D-204ENST00000477748 LNPKQ9C0E8 428 aa17■□□□□ 0.31
PDE6D-204ENST00000477748 ATP8A2Q9NTI2 1148 aa17■□□□□ 0.31
PDE6D-204ENST00000477748 SLC4A4Q9Y6R1 1079 aa17■□□□□ 0.31
PDE6D-204ENST00000477748 ZSWIM8A7E2V4 1837 aa17■□□□□ 0.31
PDE6D-204ENST00000477748 EN2P19622 333 aaPredicted RBP16.99■□□□□ 0.31
PDE6D-204ENST00000477748 APPBP2Q92624 585 aa16.99■□□□□ 0.31
PDE6D-204ENST00000477748 DDRGK1Q96HY6 314 aa16.99■□□□□ 0.31
PDE6D-204ENST00000477748 FSD1Q9BTV5 496 aa16.99■□□□□ 0.31
PDE6D-204ENST00000477748 GRK4P32298 578 aa16.98■□□□□ 0.31
PDE6D-204ENST00000477748 HMGCS2P54868 508 aa16.98■□□□□ 0.31
PDE6D-204ENST00000477748 JAG1P78504 1218 aa16.98■□□□□ 0.31
PDE6D-204ENST00000477748 FAM110CQ1W6H9 321 aa16.98■□□□□ 0.31
PDE6D-204ENST00000477748 SH3D19Q5HYK7 790 aa16.98■□□□□ 0.31
PDE6D-204ENST00000477748 TREML2Q5T2D2 321 aa16.98■□□□□ 0.31
PDE6D-204ENST00000477748 TATDN1Q6P1N9 297 aa16.98■□□□□ 0.31
PDE6D-204ENST00000477748 SLAIN1Q8ND83 568 aa16.98■□□□□ 0.31
PDE6D-204ENST00000477748 WDR18Q9BV38 432 aa16.98■□□□□ 0.31
PDE6D-204ENST00000477748 STAP2Q9UGK3 403 aa16.98■□□□□ 0.31
PDE6D-204ENST00000477748 ZBTB21Q9ULJ3 1066 aa16.98■□□□□ 0.31
PDE6D-204ENST00000477748 LOC285556D6RIA3 1793 aa16.97■□□□□ 0.31
PDE6D-204ENST00000477748 ECM2O94769 699 aaPredicted RBP16.97■□□□□ 0.31
PDE6D-204ENST00000477748 CYP2D6P10635 497 aa16.97■□□□□ 0.31
PDE6D-204ENST00000477748 GCLCP48506 637 aaPredicted RBP16.97■□□□□ 0.31
PDE6D-204ENST00000477748 PDE1AP54750 535 aa16.97■□□□□ 0.31
PDE6D-204ENST00000477748 PRKCZQ05513 592 aa16.97■□□□□ 0.31
PDE6D-204ENST00000477748 SHROOM1Q2M3G4 852 aaPredicted RBP16.97■□□□□ 0.31
PDE6D-204ENST00000477748 CERKLQ49MI3 558 aaPredicted RBP16.97■□□□□ 0.31
PDE6D-204ENST00000477748 AMOTL1Q8IY63 956 aa16.97■□□□□ 0.31
PDE6D-204ENST00000477748 OSBP2Q969R2 916 aa16.97■□□□□ 0.31
PDE6D-204ENST00000477748 STRBPQ96SI9 672 aaKnown RBP16.97■□□□□ 0.31
PDE6D-204ENST00000477748 MYH8P13535 1937 aa16.97■□□□□ 0.31
PDE6D-204ENST00000477748 CEP290O15078 2479 aa16.96■□□□□ 0.31
PDE6D-204ENST00000477748 TNPO2O14787 897 aaKnown RBP16.96■□□□□ 0.31
PDE6D-204ENST00000477748 GH2P01242 217 aa16.96■□□□□ 0.31
PDE6D-204ENST00000477748 SHMT1P34896 483 aa16.96■□□□□ 0.31
PDE6D-204ENST00000477748 BACE1P56817 501 aa16.96■□□□□ 0.31
PDE6D-204ENST00000477748 EVX2Q03828 476 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms