RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SLC8A1P32418 973 aa14.33□□□□□ -0.12
RTFDC1-207ENST00000477573 IL6STP40189 918 aaPredicted RBP14.33□□□□□ -0.12
RTFDC1-207ENST00000477573 CCDC178Q5BJE1 867 aa14.33□□□□□ -0.12
RTFDC1-207ENST00000477573 GIGYF2Q6Y7W6 1299 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-207ENST00000477573 YTHDF3Q7Z739 585 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-207ENST00000477573 DZIP3Q86Y13 1208 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-207ENST00000477573 SDR16C5Q8N3Y7 309 aa14.33□□□□□ -0.12
RTFDC1-207ENST00000477573 LMBR1Q8WVP7 490 aa14.33□□□□□ -0.12
RTFDC1-207ENST00000477573 VIPAS39Q9H9C1 493 aa14.33□□□□□ -0.12
RTFDC1-207ENST00000477573 DDX19AQ9NUU7 478 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-207ENST00000477573 A0A0G2JS52 829 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 OATP04181 439 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 CCT5P48643 541 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 SFSWAPQ12872 951 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 GNL2Q13823 731 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 MARCH10Q8NA82 808 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 CLIC6Q96NY7 704 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 CCDC8Q9H0W5 538 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 PLEKHA4Q9H4M7 779 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 DDX20Q9UHI6 824 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 GOLGA6CA6NDK9 693 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 GOLGA6BA6NDN3 693 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 FIBPO43427 364 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 KIAA0754O94854 1291 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 F13A1P00488 732 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 PCCAP05165 728 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 GOLGA6DP0CG33 693 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 PPP2R3AQ06190 1150 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 VPS72Q15906 364 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 FOXD4L6Q3SYB3 417 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 FOXD4L3Q6VB84 417 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 TBC1D5Q92609 795 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 SLC4A9Q96Q91 983 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 TNMDQ9H2S6 317 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 GOLGA6AQ9NYA3 693 aa14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-207ENST00000477573 ERVV-1B6SEH8 477 aa14.31□□□□□ -0.12
RTFDC1-207ENST00000477573 PYGBP11216 843 aa14.31□□□□□ -0.12
RTFDC1-207ENST00000477573 AARSP49588 968 aaKnown RBP eCLIP14.31□□□□□ -0.12
RTFDC1-207ENST00000477573 MYSM1Q5VVJ2 828 aa14.31□□□□□ -0.12
RTFDC1-207ENST00000477573 TRIM65Q6PJ69 517 aa14.31□□□□□ -0.12
RTFDC1-207ENST00000477573 PROCA1Q8NCQ7 364 aaPredicted RBP14.31□□□□□ -0.12
RTFDC1-207ENST00000477573 FAM81AQ8TBF8 368 aa14.31□□□□□ -0.12
RTFDC1-207ENST00000477573 SMARCC1Q92922 1105 aaPredicted RBP14.31□□□□□ -0.12
RTFDC1-207ENST00000477573 C8orf37Q96NL8 207 aa14.31□□□□□ -0.12
RTFDC1-207ENST00000477573 A6NNZ2 444 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 RASSF9O75901 435 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 PEX19P40855 299 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 IL15P40933 162 aaPredicted RBP14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 CDR1P51861 262 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 KCNB1Q14721 858 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 SLMAPQ14BN4 828 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 KIF4BQ2VIQ3 1234 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 TUBB8Q3ZCM7 444 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 TNNI3KQ59H18 835 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 ZBTB38Q8NAP3 1195 aaPredicted RBP14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 B4GALNT2Q8NHY0 566 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 CCDC102AQ96A19 550 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 ZBTB1Q9Y2K1 713 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 MRFAP1Q9Y605 127 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 FPGT-TNNI3KV9GXZ4 949 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 RBM47A0AV96 593 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 MYO1FO00160 1098 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 N4BP1O75113 896 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 KCNA4P22459 653 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 GBP2P32456 591 aaPredicted RBP14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 TFCP2Q12800 502 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 SNCBQ16143 134 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 CWF19L1Q69YN2 538 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 SLC30A9Q6PML9 568 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 MSANTD4Q8NCY6 345 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 ACSBG1Q96GR2 724 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 PLA2G12BQ9BX93 195 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 NAT10Q9H0A0 1025 aaKnown RBP14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 GPR108Q9NPR9 543 aa14.3□□□□□ -0.12
RTFDC1-207ENST00000477573 SPATA31A6Q5VVP1 1343 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 STX6O43752 255 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 FMNL1O95466 1100 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 CCDC57Q2TAC2 916 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 ARMC3Q5W041 872 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 FCHSD1Q86WN1 690 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 TRIM42Q8IWZ5 723 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 ERICH2A1L162 156 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 PDLIM1O00151 329 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 OPA1O60313 960 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 CIAO1O76071 339 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 TPP2P29144 1249 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 GCLCP48506 637 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 DRP2Q13474 957 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 DBN1Q16643 649 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 CAPRIN2Q6IMN6 1127 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 MICALCLQ6ZW33 695 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 MIPOL1Q8TD10 442 aa14.29□□□□□ -0.12
RTFDC1-207ENST00000477573 CDHR2Q9BYE9 1310 aa14.28□□□□□ -0.12
RTFDC1-207ENST00000477573 LOC102724428A0A0B4J2F2 783 aa14.28□□□□□ -0.12
RTFDC1-207ENST00000477573 GOLGA6L9A6NEM1 432 aa14.28□□□□□ -0.12
RTFDC1-207ENST00000477573 LIN7AO14910 233 aaPredicted RBP14.28□□□□□ -0.12
RTFDC1-207ENST00000477573 MEFVO15553 781 aaPredicted RBP14.28□□□□□ -0.12
RTFDC1-207ENST00000477573 TPD52L2O43399 206 aaKnown RBP14.28□□□□□ -0.12
RTFDC1-207ENST00000477573 ATP5JP18859 108 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms