RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 LMBR1LQ6UX01 489 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 CCDC129Q6ZRS4 1044 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 PLEKHH3Q7Z736 793 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 LINS1Q8NG48 757 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAIP-206ENST00000477546 PORCNQ9H237 461 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 USP40Q9NVE5 1235 aa13.03□□□□□ -0.32
TRAIP-206ENST00000477546 DOCK2Q92608 1830 aa13.02□□□□□ -0.32
TRAIP-206ENST00000477546 XIRP2A4UGR9 3374 aa13.02□□□□□ -0.32
TRAIP-206ENST00000477546 PI4K2BG5E9Z4 385 aa13.02□□□□□ -0.33
TRAIP-206ENST00000477546 PEX10O60683 326 aa13.02□□□□□ -0.33
TRAIP-206ENST00000477546 RGS3P49796 1198 aa13.02□□□□□ -0.33
TRAIP-206ENST00000477546 HERVK_113P62684 666 aa13.02□□□□□ -0.33
TRAIP-206ENST00000477546 DIXDC1Q155Q3 683 aa13.02□□□□□ -0.33
TRAIP-206ENST00000477546 SH3BP5LQ7L8J4 393 aa13.02□□□□□ -0.33
TRAIP-206ENST00000477546 ZSCAN29Q8IWY8 852 aaPredicted RBP13.02□□□□□ -0.33
TRAIP-206ENST00000477546 MIER1Q8N108 512 aa13.02□□□□□ -0.33
TRAIP-206ENST00000477546 EDC3Q96F86 508 aaKnown RBP13.02□□□□□ -0.33
TRAIP-206ENST00000477546 IDI2Q9BXS1 227 aa13.02□□□□□ -0.33
TRAIP-206ENST00000477546 FLRT1Q9NZU1 646 aa13.02□□□□□ -0.33
TRAIP-206ENST00000477546 MYO9BQ13459 2157 aa13.01□□□□□ -0.33
TRAIP-206ENST00000477546 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
TRAIP-206ENST00000477546 SLURP2P0DP57 97 aa13.01□□□□□ -0.33
TRAIP-206ENST00000477546 HOXA7P31268 230 aaPredicted RBP13.01□□□□□ -0.33
TRAIP-206ENST00000477546 ERVK-9P63128 1117 aa13.01□□□□□ -0.33
TRAIP-206ENST00000477546 ERVK-24P63145 666 aa13.01□□□□□ -0.33
TRAIP-206ENST00000477546 WDR66Q8TBY9 1149 aa13.01□□□□□ -0.33
TRAIP-206ENST00000477546 HERVK_113Q902F9 699 aa13.01□□□□□ -0.33
TRAIP-206ENST00000477546 KCNH6Q9H252 994 aa13.01□□□□□ -0.33
TRAIP-206ENST00000477546 RBPJLQ9UBG7 517 aa13.01□□□□□ -0.33
TRAIP-206ENST00000477546 MROH5Q6ZUA9 1318 aa13.01□□□□□ -0.33
TRAIP-206ENST00000477546 RFX7Q2KHR2 1363 aa13.01□□□□□ -0.33
TRAIP-206ENST00000477546 DDTLA6NHG4 134 aaPredicted RBP13□□□□□ -0.33
TRAIP-206ENST00000477546 GRXCR1A8MXD5 290 aa13□□□□□ -0.33
TRAIP-206ENST00000477546 VAMP4O75379 141 aa13□□□□□ -0.33
TRAIP-206ENST00000477546 CYBAP13498 195 aa13□□□□□ -0.33
TRAIP-206ENST00000477546 ADCYAP1R1P41586 468 aa13□□□□□ -0.33
TRAIP-206ENST00000477546 FOXK2Q01167 660 aa13□□□□□ -0.33
TRAIP-206ENST00000477546 RAB30Q15771 203 aa13□□□□□ -0.33
TRAIP-206ENST00000477546 Q3C1V9 767 aa13□□□□□ -0.33
TRAIP-206ENST00000477546 G2E3Q7L622 706 aa13□□□□□ -0.33
TRAIP-206ENST00000477546 TRPV1Q8NER1 839 aa13□□□□□ -0.33
TRAIP-206ENST00000477546 GTF3C2Q8WUA4 911 aaPredicted RBP13□□□□□ -0.33
TRAIP-206ENST00000477546 BUD13Q9BRD0 619 aaKnown RBP eCLIP13□□□□□ -0.33
TRAIP-206ENST00000477546 PUS3Q9BZE2 481 aaKnown RBP13□□□□□ -0.33
TRAIP-206ENST00000477546 OSBPL5Q9H0X9 879 aaPredicted RBP13□□□□□ -0.33
TRAIP-206ENST00000477546 E9PSI1 815 aa12.99□□□□□ -0.33
TRAIP-206ENST00000477546 TLL1O43897 1013 aa12.99□□□□□ -0.33
TRAIP-206ENST00000477546 TBC1D12O60347 775 aa12.99□□□□□ -0.33
TRAIP-206ENST00000477546 HOXC6P09630 235 aa12.99□□□□□ -0.33
TRAIP-206ENST00000477546 ATP2B2Q01814 1243 aa12.99□□□□□ -0.33
TRAIP-206ENST00000477546 FLIIQ13045 1269 aa12.99□□□□□ -0.33
TRAIP-206ENST00000477546 FKBP5Q13451 457 aaPredicted RBP12.99□□□□□ -0.33
TRAIP-206ENST00000477546 SKIV2LQ15477 1246 aaKnown RBP12.99□□□□□ -0.33
TRAIP-206ENST00000477546 EPHA10Q5JZY3 1008 aa12.99□□□□□ -0.33
TRAIP-206ENST00000477546 RASIP1Q5U651 963 aa12.99□□□□□ -0.33
TRAIP-206ENST00000477546 MICALL1Q8N3F8 863 aa12.99□□□□□ -0.33
TRAIP-206ENST00000477546 DNAAF4Q8WXU2 420 aa12.99□□□□□ -0.33
TRAIP-206ENST00000477546 CWC22Q9HCG8 908 aaKnown RBP12.99□□□□□ -0.33
TRAIP-206ENST00000477546 MSRAQ9UJ68 235 aa12.99□□□□□ -0.33
TRAIP-206ENST00000477546 KIF16BQ96L93 1317 aa12.98□□□□□ -0.33
TRAIP-206ENST00000477546 CHD9Q3L8U1 2897 aa12.98□□□□□ -0.33
TRAIP-206ENST00000477546 GLRX3O76003 335 aaKnown RBP12.98□□□□□ -0.33
TRAIP-206ENST00000477546 CYP2C19P33261 490 aa12.98□□□□□ -0.33
TRAIP-206ENST00000477546 CCDC174Q6PII3 467 aa12.98□□□□□ -0.33
TRAIP-206ENST00000477546 FERMT2Q96AC1 680 aa12.98□□□□□ -0.33
TRAIP-206ENST00000477546 TMEM39AQ9NV64 488 aa12.98□□□□□ -0.33
TRAIP-206ENST00000477546 COG5Q9UP83 839 aa12.98□□□□□ -0.33
TRAIP-206ENST00000477546 SLC15A5A6NIM6 579 aa12.97□□□□□ -0.33
TRAIP-206ENST00000477546 USP17L5A8MUK1 530 aa12.97□□□□□ -0.33
TRAIP-206ENST00000477546 IGHA2P01877 340 aa12.97□□□□□ -0.33
TRAIP-206ENST00000477546 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
TRAIP-206ENST00000477546 PRDX5P30044 214 aa12.97□□□□□ -0.33
TRAIP-206ENST00000477546 LRRC41Q15345 812 aa12.97□□□□□ -0.33
TRAIP-206ENST00000477546 FBXL18Q96ME1 805 aa12.97□□□□□ -0.33
TRAIP-206ENST00000477546 PAGR1Q9BTK6 254 aa12.97□□□□□ -0.33
TRAIP-206ENST00000477546 SLC28A3Q9HAS3 691 aa12.97□□□□□ -0.33
TRAIP-206ENST00000477546 AS3MTQ9HBK9 375 aa12.97□□□□□ -0.33
TRAIP-206ENST00000477546 TMOD4Q9NZQ9 345 aa12.97□□□□□ -0.33
TRAIP-206ENST00000477546 SEPT4O43236 478 aa12.96□□□□□ -0.33
TRAIP-206ENST00000477546 PQBP1O60828 265 aaKnown RBP12.96□□□□□ -0.33
TRAIP-206ENST00000477546 MTMR2Q13614 643 aa12.96□□□□□ -0.33
TRAIP-206ENST00000477546 TMEM240Q5SV17 173 aa12.96□□□□□ -0.33
TRAIP-206ENST00000477546 ANO1Q5XXA6 986 aa12.96□□□□□ -0.33
TRAIP-206ENST00000477546 VGLL2Q8N8G2 317 aa12.96□□□□□ -0.33
TRAIP-206ENST00000477546 SLC44A5Q8NCS7 719 aa12.96□□□□□ -0.33
TRAIP-206ENST00000477546 NKX2-4Q9H2Z4 354 aa12.96□□□□□ -0.33
TRAIP-206ENST00000477546 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRAIP-206ENST00000477546 PHF24Q9UPV7 400 aa12.96□□□□□ -0.33
TRAIP-206ENST00000477546 LDHBP07195 334 aaKnown RBP12.95□□□□□ -0.34
TRAIP-206ENST00000477546 PTPREP23469 700 aa12.95□□□□□ -0.34
TRAIP-206ENST00000477546 CAP2P40123 477 aa12.95□□□□□ -0.34
TRAIP-206ENST00000477546 BACE1P56817 501 aa12.95□□□□□ -0.34
TRAIP-206ENST00000477546 CCNA1P78396 465 aa12.95□□□□□ -0.34
TRAIP-206ENST00000477546 SLFN5Q08AF3 891 aa12.95□□□□□ -0.34
TRAIP-206ENST00000477546 PPIGQ13427 754 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAIP-206ENST00000477546 GRB14Q14449 540 aa12.95□□□□□ -0.34
TRAIP-206ENST00000477546 METTL24Q5JXM2 366 aa12.95□□□□□ -0.34
TRAIP-206ENST00000477546 NPLOC4Q8TAT6 608 aa12.95□□□□□ -0.34
TRAIP-206ENST00000477546 CDCA7LQ96GN5 454 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms