RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 ATP5JP18859 108 aa19.03■□□□□ 0.64
CLDN11-204ENST00000477531 EN2P19622 333 aaPredicted RBP19.03■□□□□ 0.64
CLDN11-204ENST00000477531 GRK4P32298 578 aa19.03■□□□□ 0.64
CLDN11-204ENST00000477531 MTMR2Q13614 643 aa19.03■□□□□ 0.64
CLDN11-204ENST00000477531 ANKRD13CQ8N6S4 541 aa19.03■□□□□ 0.64
CLDN11-204ENST00000477531 EHD4Q9H223 541 aa19.03■□□□□ 0.64
CLDN11-204ENST00000477531 PAG1Q9NWQ8 432 aa19.03■□□□□ 0.64
CLDN11-204ENST00000477531 ZBTB21Q9ULJ3 1066 aa19.03■□□□□ 0.64
CLDN11-204ENST00000477531 PTPRFP10586 1907 aa19.03■□□□□ 0.64
CLDN11-204ENST00000477531 ZNF532Q9HCE3 1301 aa19.02■□□□□ 0.64
CLDN11-204ENST00000477531 TNPO2O14787 897 aaKnown RBP19.02■□□□□ 0.64
CLDN11-204ENST00000477531 UBXN2AP68543 259 aa19.02■□□□□ 0.64
CLDN11-204ENST00000477531 IRX3P78415 501 aaPredicted RBP19.02■□□□□ 0.64
CLDN11-204ENST00000477531 PRKCZQ05513 592 aa19.02■□□□□ 0.64
CLDN11-204ENST00000477531 FAM110CQ1W6H9 321 aa19.02■□□□□ 0.64
CLDN11-204ENST00000477531 COA7Q96BR5 231 aa19.02■□□□□ 0.64
CLDN11-204ENST00000477531 RIOK1Q9BRS2 568 aaKnown RBP19.02■□□□□ 0.64
CLDN11-204ENST00000477531 FOCADQ5VW36 1801 aa19.02■□□□□ 0.63
CLDN11-204ENST00000477531 ATAD5Q96QE3 1844 aa19.02■□□□□ 0.63
CLDN11-204ENST00000477531 CDK5RAP2Q96SN8 1893 aa19.01■□□□□ 0.63
CLDN11-204ENST00000477531 CERKLQ49MI3 558 aaPredicted RBP19.01■□□□□ 0.63
CLDN11-204ENST00000477531 PRPF38BQ5VTL8 546 aaKnown RBP19.01■□□□□ 0.63
CLDN11-204ENST00000477531 SLAIN1Q8ND83 568 aa19.01■□□□□ 0.63
CLDN11-204ENST00000477531 ASCC2Q9H1I8 757 aaPredicted RBP19.01■□□□□ 0.63
CLDN11-204ENST00000477531 CABP5Q9NP86 173 aa19.01■□□□□ 0.63
CLDN11-204ENST00000477531 ZSWIM8A7E2V4 1837 aa19■□□□□ 0.63
CLDN11-204ENST00000477531 GH2P01242 217 aa19■□□□□ 0.63
CLDN11-204ENST00000477531 USP17L2Q6R6M4 530 aa19■□□□□ 0.63
CLDN11-204ENST00000477531 HAUS7Q99871 368 aa19■□□□□ 0.63
CLDN11-204ENST00000477531 MCM9Q9NXL9 1143 aa19■□□□□ 0.63
CLDN11-204ENST00000477531 MYH1P12882 1939 aa19■□□□□ 0.63
CLDN11-204ENST00000477531 HOXA7P31268 230 aaPredicted RBP18.99■□□□□ 0.63
CLDN11-204ENST00000477531 JAG1P78504 1218 aa18.99■□□□□ 0.63
CLDN11-204ENST00000477531 RAB3GAP1Q15042 981 aa18.99■□□□□ 0.63
CLDN11-204ENST00000477531 ZSCAN25Q6NSZ9 544 aa18.99■□□□□ 0.63
CLDN11-204ENST00000477531 TATDN1Q6P1N9 297 aa18.99■□□□□ 0.63
CLDN11-204ENST00000477531 EDC3Q96F86 508 aaKnown RBP18.99■□□□□ 0.63
CLDN11-204ENST00000477531 GPATCH3Q96I76 525 aa18.99■□□□□ 0.63
CLDN11-204ENST00000477531 FEZ1Q99689 392 aa18.99■□□□□ 0.63
CLDN11-204ENST00000477531 SIPA1L1O43166 1804 aa18.99■□□□□ 0.63
CLDN11-204ENST00000477531 TCRBV5S4A2TA0A5A2 114 aa18.98■□□□□ 0.63
CLDN11-204ENST00000477531 SMARCA5O60264 1052 aaPredicted RBP18.98■□□□□ 0.63
CLDN11-204ENST00000477531 FLT3LGP49771 235 aa18.98■□□□□ 0.63
CLDN11-204ENST00000477531 PLCD1P51178 756 aa18.98■□□□□ 0.63
CLDN11-204ENST00000477531 ABCB5Q2M3G0 1257 aa18.98■□□□□ 0.63
CLDN11-204ENST00000477531 AMOTL1Q8IY63 956 aa18.98■□□□□ 0.63
CLDN11-204ENST00000477531 DDRGK1Q96HY6 314 aa18.98■□□□□ 0.63
CLDN11-204ENST00000477531 TAOK2Q9UL54 1235 aa18.98■□□□□ 0.63
CLDN11-204ENST00000477531 GABRQQ9UN88 632 aa18.98■□□□□ 0.63
CLDN11-204ENST00000477531 ADCY3O60266 1144 aa18.97■□□□□ 0.63
CLDN11-204ENST00000477531 ADD2P35612 726 aa18.97■□□□□ 0.63
CLDN11-204ENST00000477531 USP14P54578 494 aa18.97■□□□□ 0.63
CLDN11-204ENST00000477531 SHROOM1Q2M3G4 852 aaPredicted RBP18.97■□□□□ 0.63
CLDN11-204ENST00000477531 LCORLQ8N3X6 602 aa18.97■□□□□ 0.63
CLDN11-204ENST00000477531 NKX2-3Q8TAU0 364 aa18.97■□□□□ 0.63
CLDN11-204ENST00000477531 GTF3C2Q8WUA4 911 aaPredicted RBP18.97■□□□□ 0.63
CLDN11-204ENST00000477531 DCTPP1Q9H773 170 aa18.97■□□□□ 0.63
CLDN11-204ENST00000477531 LOC285556D6RIA3 1793 aa18.96■□□□□ 0.63
CLDN11-204ENST00000477531 RBBP6Q7Z6E9 1792 aaKnown RBP18.96■□□□□ 0.63
CLDN11-204ENST00000477531 MBD4O95243 580 aa18.96■□□□□ 0.63
CLDN11-204ENST00000477531 IRF5Q13568 498 aa18.96■□□□□ 0.63
CLDN11-204ENST00000477531 MTFR1Q15390 333 aa18.96■□□□□ 0.63
CLDN11-204ENST00000477531 CCAR1Q8IX12 1150 aaKnown RBP18.96■□□□□ 0.63
CLDN11-204ENST00000477531 PXYLP1Q8TE99 480 aa18.96■□□□□ 0.63
CLDN11-204ENST00000477531 SDR42E1Q8WUS8 393 aa18.96■□□□□ 0.63
CLDN11-204ENST00000477531 P2RX7Q99572 595 aaKnown RBP18.96■□□□□ 0.63
CLDN11-204ENST00000477531 RNF208Q9H0X6 261 aa18.96■□□□□ 0.63
CLDN11-204ENST00000477531 ARMT1Q9H993 441 aa18.96■□□□□ 0.63
CLDN11-204ENST00000477531 DCP1AQ9NPI6 582 aaPredicted RBP18.96■□□□□ 0.63
CLDN11-204ENST00000477531 ATP8A2Q9NTI2 1148 aa18.96■□□□□ 0.63
CLDN11-204ENST00000477531 ECHDC1Q9NTX5 307 aa18.96■□□□□ 0.63
CLDN11-204ENST00000477531 BRCA2P51587 3418 aa18.95■□□□□ 0.62
CLDN11-204ENST00000477531 MGAMO43451 1857 aa18.95■□□□□ 0.62
CLDN11-204ENST00000477531 CCL5P13501 91 aa18.95■□□□□ 0.62
CLDN11-204ENST00000477531 SHMT1P34896 483 aa18.95■□□□□ 0.62
CLDN11-204ENST00000477531 HERVK_113P62684 666 aa18.95■□□□□ 0.62
CLDN11-204ENST00000477531 UBE3CQ15386 1083 aa18.95■□□□□ 0.62
CLDN11-204ENST00000477531 MKI67P46013 3256 aaKnown RBP18.94■□□□□ 0.62
CLDN11-204ENST00000477531 MPHOSPH10O00566 681 aaKnown RBP18.94■□□□□ 0.62
CLDN11-204ENST00000477531 ZYXQ15942 572 aaKnown RBP18.94■□□□□ 0.62
CLDN11-204ENST00000477531 GPRC5AQ8NFJ5 357 aa18.94■□□□□ 0.62
CLDN11-204ENST00000477531 EMILIN3Q9NT22 766 aa18.94■□□□□ 0.62
CLDN11-204ENST00000477531 MORF4L1Q9UBU8 362 aa18.94■□□□□ 0.62
CLDN11-204ENST00000477531 SWAP70Q9UH65 585 aa18.94■□□□□ 0.62
CLDN11-204ENST00000477531 USP17L15C9J2P7 530 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 USP17L13C9JLJ4 530 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 USP17L11C9JVI0 530 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 USP17L18D6R9N7 530 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 USP17L22D6RA61 530 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 USP17L17D6RBQ6 530 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 USP17L19D6RCP7 530 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 USP17L20D6RJB6 530 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 GJB1P08034 283 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 ELNP15502 786 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 GABPAQ06546 454 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 USP17L24Q0WX57 530 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 C12orf42Q96LP6 360 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 KIAA1683Q9H0B3 1180 aa18.93■□□□□ 0.62
CLDN11-204ENST00000477531 INHAP05111 366 aa18.92■□□□□ 0.62
CLDN11-204ENST00000477531 CWC22Q9HCG8 908 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms