RNA–Protein interactions for RNA: ENST00000477347.1

RPSAP55-201, Transcript of ribosomal protein SA pseudogene 55, humanhuman

BASIC

Gene RPSAP55, Length 876 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP55-201ENST00000477347 LIMCH1Q9UPQ0 1083 aa11.53□□□□□ -0.56
RPSAP55-201ENST00000477347 TNKSO95271 1327 aa11.53□□□□□ -0.56
RPSAP55-201ENST00000477347 GLTPD2A6NH11 291 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 CCDC69A6NI79 296 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 PCP11498 1178 aaKnown RBP11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 SHMT1P34896 483 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 EPHX2P34913 555 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 CCT2P78371 535 aaKnown RBP11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 ATP2B2Q01814 1243 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 TNFAIP1Q13829 316 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 SART3Q15020 963 aaKnown RBP11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 ME3Q16798 604 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 SHROOM1Q2M3G4 852 aaPredicted RBP11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 PRAMEF18Q5VWM3 479 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 MIGA2Q7L4E1 593 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 APOBEC3FQ8IUX4 373 aaKnown RBP11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 TMEM87BQ96K49 555 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 DHX36Q9H2U1 1008 aaKnown RBP11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 DNAJC18Q9H819 358 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 ZNF287Q9HBT7 754 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 PI4KBQ9UBF8 816 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 ANGEL1Q9UNK9 670 aaKnown RBP11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 ATRNL1Q5VV63 1379 aa11.52□□□□□ -0.57
RPSAP55-201ENST00000477347 COL2A1P02458 1487 aaPredicted RBP11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 ADM5C9JUS6 153 aa11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 MMP14P50281 582 aa11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 IFIT1BQ5T764 474 aaKnown RBP11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 DLK2Q6UY11 383 aa11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 MICU3Q86XE3 530 aa11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 IQCA1Q86XH1 822 aa11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 NUP133Q8WUM0 1156 aa11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 ZSCAN10Q96SZ4 725 aaPredicted RBP11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 LY9Q9HBG7 655 aa11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 SWAP70Q9UH65 585 aa11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 BRPF3Q9ULD4 1205 aa11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 CLEC11AQ9Y240 323 aa11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 WDR19Q8NEZ3 1342 aa11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 ZC3H4Q9UPT8 1303 aaKnown RBP11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 WDR90Q96KV7 1748 aa11.51□□□□□ -0.57
RPSAP55-201ENST00000477347 GOLGA8AA7E2F4 631 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 PPFIA3O75145 1194 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 NPM3O75607 178 aaKnown RBP11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 FGRP09769 529 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 FOSBP53539 338 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 GABPAQ06546 454 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 ST3GAL1Q11201 340 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 PRKG1Q13976 671 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 FKBP1CQ5VVH2 108 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 FAM83AQ86UY5 434 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 ENAHQ8N8S7 591 aaPredicted RBP11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 ZSCAN31Q96LW9 406 aaPredicted RBP11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 DEFB129Q9H1M3 183 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 EHD4Q9H223 541 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 NCOA5Q9HCD5 579 aaKnown RBP11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 STX8Q9UNK0 236 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 FZD1Q9UP38 647 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 SCN4AP35499 1836 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 ATAD5Q96QE3 1844 aa11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 POLR2AP24928 1970 aaKnown RBP11.5□□□□□ -0.57
RPSAP55-201ENST00000477347 RAD21O60216 631 aa11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 CERKLQ49MI3 558 aaPredicted RBP11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 NBPF12Q5TAG4 269 aaPredicted RBP11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 SYNE3Q6ZMZ3 975 aa11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 LRRC47Q8N1G4 583 aaKnown RBP11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 IGDCC4Q8TDY8 1250 aa11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 DCPSQ96C86 337 aaKnown RBP11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 L3MBTL3Q96JM7 780 aaPredicted RBP11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 ALDH8A1Q9H2A2 487 aaPredicted RBP11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 TAF1DQ9H5J8 278 aaPredicted RBP11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 KAT14Q9H8E8 782 aa11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 RRAGCQ9HB90 399 aa11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 SH2B1Q9NRF2 756 aaPredicted RBP11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 ISY1Q9ULR0 285 aaKnown RBP11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 SLC12A7Q9Y666 1083 aa11.49□□□□□ -0.57
RPSAP55-201ENST00000477347 MYH4Q9Y623 1939 aa11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 IQCA1LA6NCM1 817 aa11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 ZBTB43O43298 467 aa11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 PDIA3P30101 505 aaKnown RBP11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 METAP2P50579 478 aaKnown RBP eCLIP11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 SCRN1Q12765 414 aa11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 RRP1BQ14684 758 aaKnown RBP11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 RAB3GAP1Q15042 981 aa11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 SEC23AQ15436 765 aa11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 ABCB5Q2M3G0 1257 aa11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 FOXP4Q8IVH2 680 aaPredicted RBP11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 SULF1Q8IWU6 871 aa11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 ZNF654Q8IZM8 581 aa11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 NEDD1Q8NHV4 660 aa11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 GTF3C6Q969F1 213 aa11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 CEP95Q96GE4 821 aa11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 IL17RBQ9NRM6 502 aa11.48□□□□□ -0.57
RPSAP55-201ENST00000477347 GREB1LQ9C091 1923 aaPredicted RBP11.47□□□□□ -0.57
RPSAP55-201ENST00000477347 JAK2O60674 1132 aa11.47□□□□□ -0.57
RPSAP55-201ENST00000477347 PFKFB2O60825 505 aa11.47□□□□□ -0.57
RPSAP55-201ENST00000477347 GH2P01242 217 aa11.47□□□□□ -0.57
RPSAP55-201ENST00000477347 POTEIP0CG38 1075 aa11.47□□□□□ -0.57
RPSAP55-201ENST00000477347 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
RPSAP55-201ENST00000477347 SEPT2Q15019 361 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms