RNA–Protein interactions for RNA: ENST00000476988.2

ITGB5-206, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 492 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-206ENST00000476988 TTC39AQ5SRH9 613 aa12.55□□□□□ -0.4
ITGB5-206ENST00000476988 ZNF467Q7Z7K2 595 aaPredicted RBP12.55□□□□□ -0.4
ITGB5-206ENST00000476988 ATRNL1Q5VV63 1379 aa12.55□□□□□ -0.4
ITGB5-206ENST00000476988 USP17L10C9JJH3 530 aa12.54□□□□□ -0.4
ITGB5-206ENST00000476988 CCNA1P78396 465 aa12.54□□□□□ -0.4
ITGB5-206ENST00000476988 GPR153Q6NV75 609 aa12.54□□□□□ -0.4
ITGB5-206ENST00000476988 SH3BP5LQ7L8J4 393 aa12.54□□□□□ -0.4
ITGB5-206ENST00000476988 NSUN4Q96CB9 384 aaKnown RBP12.54□□□□□ -0.4
ITGB5-206ENST00000476988 WDR18Q9BV38 432 aa12.54□□□□□ -0.4
ITGB5-206ENST00000476988 CRISPLD2Q9H0B8 497 aa12.54□□□□□ -0.4
ITGB5-206ENST00000476988 ASCC2Q9H1I8 757 aaPredicted RBP12.54□□□□□ -0.4
ITGB5-206ENST00000476988 C11orf49Q9H6J7 331 aa12.54□□□□□ -0.4
ITGB5-206ENST00000476988 DDX4Q9NQI0 724 aaKnown RBP12.54□□□□□ -0.4
ITGB5-206ENST00000476988 BMP2KQ9NSY1 1161 aaPredicted RBP12.54□□□□□ -0.4
ITGB5-206ENST00000476988 HMG20BQ9P0W2 317 aa12.54□□□□□ -0.4
ITGB5-206ENST00000476988 MYH13Q9UKX3 1938 aa12.53□□□□□ -0.4
ITGB5-206ENST00000476988 XRCC5P13010 732 aaKnown RBP12.53□□□□□ -0.4
ITGB5-206ENST00000476988 BMP8BP34820 402 aa12.53□□□□□ -0.4
ITGB5-206ENST00000476988 BACE1P56817 501 aa12.53□□□□□ -0.4
ITGB5-206ENST00000476988 MTX1Q13505 466 aa12.53□□□□□ -0.4
ITGB5-206ENST00000476988 SH3D19Q5HYK7 790 aa12.53□□□□□ -0.4
ITGB5-206ENST00000476988 TREML2Q5T2D2 321 aa12.53□□□□□ -0.4
ITGB5-206ENST00000476988 TMED8Q6PL24 325 aaPredicted RBP12.53□□□□□ -0.4
ITGB5-206ENST00000476988 MEIS3Q99687 375 aa12.53□□□□□ -0.4
ITGB5-206ENST00000476988 STAP2Q9UGK3 403 aa12.53□□□□□ -0.4
ITGB5-206ENST00000476988 COL2A1P02458 1487 aaPredicted RBP12.53□□□□□ -0.4
ITGB5-206ENST00000476988 CENPFP49454 3210 aa12.52□□□□□ -0.41
ITGB5-206ENST00000476988 ZKSCAN1P17029 563 aaPredicted RBP12.52□□□□□ -0.41
ITGB5-206ENST00000476988 ARID4AP29374 1257 aaPredicted RBP12.52□□□□□ -0.41
ITGB5-206ENST00000476988 HOXA7P31268 230 aaPredicted RBP12.52□□□□□ -0.41
ITGB5-206ENST00000476988 RGS2P41220 211 aa12.52□□□□□ -0.41
ITGB5-206ENST00000476988 USP14P54578 494 aa12.52□□□□□ -0.41
ITGB5-206ENST00000476988 RHBDL3P58872 404 aa12.52□□□□□ -0.41
ITGB5-206ENST00000476988 C7orf61Q8IZ16 206 aa12.52□□□□□ -0.41
ITGB5-206ENST00000476988 FRAT1Q92837 279 aaPredicted RBP12.52□□□□□ -0.41
ITGB5-206ENST00000476988 FEZ1Q99689 392 aa12.52□□□□□ -0.41
ITGB5-206ENST00000476988 MORF4L1Q9UBU8 362 aa12.52□□□□□ -0.41
ITGB5-206ENST00000476988 PRKAG2Q9UGJ0 569 aa12.52□□□□□ -0.41
ITGB5-206ENST00000476988 CYP2B6P20813 491 aa12.51□□□□□ -0.41
ITGB5-206ENST00000476988 USP5P45974 858 aa12.51□□□□□ -0.41
ITGB5-206ENST00000476988 ATN1P54259 1190 aaPredicted RBP12.51□□□□□ -0.41
ITGB5-206ENST00000476988 MTMR2Q13614 643 aa12.51□□□□□ -0.41
ITGB5-206ENST00000476988 USP17L2Q6R6M4 530 aa12.51□□□□□ -0.41
ITGB5-206ENST00000476988 TGFBRAP1Q8WUH2 860 aa12.51□□□□□ -0.41
ITGB5-206ENST00000476988 CDCA7LQ96GN5 454 aa12.51□□□□□ -0.41
ITGB5-206ENST00000476988 CABP5Q9NP86 173 aa12.51□□□□□ -0.41
ITGB5-206ENST00000476988 GPR108Q9NPR9 543 aa12.51□□□□□ -0.41
ITGB5-206ENST00000476988 AATFQ9NY61 560 aaKnown RBP eCLIP12.51□□□□□ -0.41
ITGB5-206ENST00000476988 IVNS1ABPQ9Y6Y0 642 aa12.51□□□□□ -0.41
ITGB5-206ENST00000476988 MKI67P46013 3256 aaKnown RBP12.5□□□□□ -0.41
ITGB5-206ENST00000476988 FAM196BA6NMK8 535 aa12.5□□□□□ -0.41
ITGB5-206ENST00000476988 TTLL13PA6NNM8 815 aa12.5□□□□□ -0.41
ITGB5-206ENST00000476988 DLL1O00548 723 aa12.5□□□□□ -0.41
ITGB5-206ENST00000476988 MSCO60682 206 aa12.5□□□□□ -0.41
ITGB5-206ENST00000476988 RARSP54136 660 aaKnown RBP12.5□□□□□ -0.41
ITGB5-206ENST00000476988 HERVK_113P62684 666 aa12.5□□□□□ -0.41
ITGB5-206ENST00000476988 MFSD14CQ5VZR4 134 aa12.5□□□□□ -0.41
ITGB5-206ENST00000476988 TBC1D9Q6ZT07 1266 aa12.5□□□□□ -0.41
ITGB5-206ENST00000476988 TTC6Q86TZ1 520 aa12.5□□□□□ -0.41
ITGB5-206ENST00000476988 TRMT2AQ8IZ69 625 aaKnown RBP12.5□□□□□ -0.41
ITGB5-206ENST00000476988 SH3RF3Q8TEJ3 882 aaPredicted RBP12.5□□□□□ -0.41
ITGB5-206ENST00000476988 LBHD1Q9BQE6 289 aaPredicted RBP12.5□□□□□ -0.41
ITGB5-206ENST00000476988 UBE2OQ9C0C9 1292 aaKnown RBP12.5□□□□□ -0.41
ITGB5-206ENST00000476988 RFX7Q2KHR2 1363 aa12.5□□□□□ -0.41
ITGB5-206ENST00000476988 PPP4CP60510 307 aa12.49□□□□□ -0.41
ITGB5-206ENST00000476988 WDR78Q5VTH9 848 aa12.49□□□□□ -0.41
ITGB5-206ENST00000476988 PLEKHH3Q7Z736 793 aa12.49□□□□□ -0.41
ITGB5-206ENST00000476988 CCDC84Q86UT8 332 aaPredicted RBP12.49□□□□□ -0.41
ITGB5-206ENST00000476988 PRO3102Q9H379 93 aa12.49□□□□□ -0.41
ITGB5-206ENST00000476988 SLC5A4Q9NY91 659 aa12.49□□□□□ -0.41
ITGB5-206ENST00000476988 OGDHLQ9ULD0 1010 aa12.49□□□□□ -0.41
ITGB5-206ENST00000476988 DOCK2Q92608 1830 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 USP17L15C9J2P7 530 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 USP17L13C9JLJ4 530 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 USP17L11C9JVI0 530 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 USP17L18D6R9N7 530 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 USP17L22D6RA61 530 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 USP17L17D6RBQ6 530 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 USP17L19D6RCP7 530 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 USP17L20D6RJB6 530 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 ERVK-9P63128 1117 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 ERVK-24P63145 666 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 USP17L24Q0WX57 530 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 MAP3K12Q12852 859 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 MAPKAPK5Q8IW41 473 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 FTSJ3Q8IY81 847 aaKnown RBP12.48□□□□□ -0.41
ITGB5-206ENST00000476988 TDHQ8IZJ6 230 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 P2RX7Q99572 595 aaKnown RBP12.48□□□□□ -0.41
ITGB5-206ENST00000476988 APBA2Q99767 749 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 PAGR1Q9BTK6 254 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 GJD2Q9UKL4 321 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 RABGAP1Q9Y3P9 1069 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 MYH2Q9UKX2 1941 aa12.48□□□□□ -0.41
ITGB5-206ENST00000476988 DOCK1Q14185 1865 aa12.47□□□□□ -0.41
ITGB5-206ENST00000476988 SURF6O75683 361 aaKnown RBP12.47□□□□□ -0.41
ITGB5-206ENST00000476988 MCAMP43121 646 aa12.47□□□□□ -0.41
ITGB5-206ENST00000476988 ATP2B2Q01814 1243 aa12.47□□□□□ -0.41
ITGB5-206ENST00000476988 LRIT3Q3SXY7 679 aa12.47□□□□□ -0.41
ITGB5-206ENST00000476988 ZKSCAN2Q63HK3 967 aa12.47□□□□□ -0.41
ITGB5-206ENST00000476988 DEFB123Q8N688 67 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms