RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 SUPT16HQ9Y5B9 1047 aaKnown RBP7.59□□□□□ -1.19
SOX2-OT-207ENST00000476964 CORINQ9Y5Q5 1042 aa7.59□□□□□ -1.19
SOX2-OT-207ENST00000476964 U3KQE9 123 aa7.59□□□□□ -1.19
SOX2-OT-207ENST00000476964 IGF2BP3O00425 579 aaKnown RBP eCLIP7.58□□□□□ -1.2
SOX2-OT-207ENST00000476964 BPNT1O95861 308 aa7.58□□□□□ -1.2
SOX2-OT-207ENST00000476964 OXCT1P55809 520 aa7.58□□□□□ -1.2
SOX2-OT-207ENST00000476964 METTL16Q86W50 562 aaKnown RBP7.58□□□□□ -1.2
SOX2-OT-207ENST00000476964 RNF34Q969K3 372 aa7.58□□□□□ -1.2
SOX2-OT-207ENST00000476964 ACSF2Q96CM8 615 aaPredicted RBP7.58□□□□□ -1.2
SOX2-OT-207ENST00000476964 TMEM87BQ96K49 555 aa7.58□□□□□ -1.2
SOX2-OT-207ENST00000476964 CRKP46108 304 aa7.57□□□□□ -1.2
SOX2-OT-207ENST00000476964 PRAMEF13Q5VWM6 474 aa7.57□□□□□ -1.2
SOX2-OT-207ENST00000476964 RIN3Q8TB24 985 aa7.57□□□□□ -1.2
SOX2-OT-207ENST00000476964 NT5C1AQ9BXI3 368 aa7.57□□□□□ -1.2
SOX2-OT-207ENST00000476964 LRRC4CQ9HCJ2 640 aa7.57□□□□□ -1.2
SOX2-OT-207ENST00000476964 BSDC1Q9NW68 430 aaPredicted RBP7.57□□□□□ -1.2
SOX2-OT-207ENST00000476964 DDX41Q9UJV9 622 aaKnown RBP7.57□□□□□ -1.2
SOX2-OT-207ENST00000476964 CNTNAP4Q9C0A0 1308 aa7.56□□□□□ -1.2
SOX2-OT-207ENST00000476964 ATE1O95260 518 aa7.56□□□□□ -1.2
SOX2-OT-207ENST00000476964 RACK1P63244 317 aaKnown RBP7.56□□□□□ -1.2
SOX2-OT-207ENST00000476964 XP32Q5T750 250 aa7.56□□□□□ -1.2
SOX2-OT-207ENST00000476964 NFXL1Q6ZNB6 911 aa7.56□□□□□ -1.2
SOX2-OT-207ENST00000476964 CCDC39Q9UFE4 941 aa7.56□□□□□ -1.2
SOX2-OT-207ENST00000476964 WNT11O96014 354 aa7.55□□□□□ -1.2
SOX2-OT-207ENST00000476964 PLCG1P19174 1290 aa7.55□□□□□ -1.2
SOX2-OT-207ENST00000476964 USP48Q86UV5 1035 aa7.55□□□□□ -1.2
SOX2-OT-207ENST00000476964 SLITRK4Q8IW52 837 aa7.55□□□□□ -1.2
SOX2-OT-207ENST00000476964 NETO1Q8TDF5 533 aa7.55□□□□□ -1.2
SOX2-OT-207ENST00000476964 EAF1Q96JC9 268 aaPredicted RBP7.55□□□□□ -1.2
SOX2-OT-207ENST00000476964 TNKS2Q9H2K2 1166 aa7.55□□□□□ -1.2
SOX2-OT-207ENST00000476964 UBP1Q9NZI7 540 aa7.55□□□□□ -1.2
SOX2-OT-207ENST00000476964 GTF2IRD1Q9UHL9 959 aa7.55□□□□□ -1.2
SOX2-OT-207ENST00000476964 PLAGL2Q9UPG8 496 aa7.55□□□□□ -1.2
SOX2-OT-207ENST00000476964 HTR3BO95264 441 aa7.54□□□□□ -1.2
SOX2-OT-207ENST00000476964 CWF19L2Q2TBE0 894 aaKnown RBP7.54□□□□□ -1.2
SOX2-OT-207ENST00000476964 ZNF394Q53GI3 561 aa7.54□□□□□ -1.2
SOX2-OT-207ENST00000476964 LETMD1Q6P1Q0 360 aa7.54□□□□□ -1.2
SOX2-OT-207ENST00000476964 C22orf34Q6ZV56 151 aa7.54□□□□□ -1.2
SOX2-OT-207ENST00000476964 SLFN12Q8IYM2 578 aa7.54□□□□□ -1.2
SOX2-OT-207ENST00000476964 REXO1Q8N1G1 1221 aaKnown RBP7.54□□□□□ -1.2
SOX2-OT-207ENST00000476964 FAM181AQ8N9Y4 354 aa7.54□□□□□ -1.2
SOX2-OT-207ENST00000476964 SPON2Q9BUD6 331 aa7.54□□□□□ -1.2
SOX2-OT-207ENST00000476964 EHMT1Q9H9B1 1298 aa7.54□□□□□ -1.2
SOX2-OT-207ENST00000476964 BRMS1Q9HCU9 246 aa7.54□□□□□ -1.2
SOX2-OT-207ENST00000476964 REV1Q9UBZ9 1251 aa7.54□□□□□ -1.2
SOX2-OT-207ENST00000476964 MAPK8IP1Q9UQF2 711 aa7.54□□□□□ -1.2
SOX2-OT-207ENST00000476964 UPK3BL1B0FP48 263 aa7.53□□□□□ -1.2
SOX2-OT-207ENST00000476964 UPK3BL2E5RIL1 263 aa7.53□□□□□ -1.2
SOX2-OT-207ENST00000476964 GRIN3BO60391 1043 aa7.53□□□□□ -1.2
SOX2-OT-207ENST00000476964 WFDC3Q8IUB2 231 aa7.53□□□□□ -1.2
SOX2-OT-207ENST00000476964 PLD6Q8N2A8 252 aaKnown RBP7.53□□□□□ -1.2
SOX2-OT-207ENST00000476964 PPP1R13LQ8WUF5 828 aa7.53□□□□□ -1.2
SOX2-OT-207ENST00000476964 MIPEPQ99797 713 aa7.53□□□□□ -1.2
SOX2-OT-207ENST00000476964 TLR3O15455 904 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-207ENST00000476964 DNAJA2O60884 412 aa7.52□□□□□ -1.21
SOX2-OT-207ENST00000476964 CEACAM5P06731 702 aa7.52□□□□□ -1.21
SOX2-OT-207ENST00000476964 HDLBPQ00341 1268 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-207ENST00000476964 IFI16Q16666 785 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-207ENST00000476964 NKPD1Q17RQ9 610 aa7.52□□□□□ -1.21
SOX2-OT-207ENST00000476964 KIAA0825Q8IV33 1275 aa7.52□□□□□ -1.21
SOX2-OT-207ENST00000476964 DNAJB8Q8NHS0 232 aa7.52□□□□□ -1.21
SOX2-OT-207ENST00000476964 PRDM5Q9NQX1 630 aaPredicted RBP7.52□□□□□ -1.21
SOX2-OT-207ENST00000476964 VAV3Q9UKW4 847 aa7.52□□□□□ -1.21
SOX2-OT-207ENST00000476964 CEP131Q9UPN4 1083 aa7.52□□□□□ -1.21
SOX2-OT-207ENST00000476964 SNX11Q9Y5W9 270 aa7.52□□□□□ -1.21
SOX2-OT-207ENST00000476964 COL17A1Q9UMD9 1497 aaPredicted RBP7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 CHURC1-FNTBB4DL54 471 aa7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 ZNF865P0CJ78 1059 aaPredicted RBP7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 PRKCQQ04759 706 aa7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 APOBRQ0VD83 1088 aa7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 ZNF746Q6NUN9 644 aaPredicted RBP7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 NBPF11Q86T75 865 aa7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 VSIG10LQ86VR7 867 aa7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 XAGE3Q8WTP9 111 aa7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 BCL7CQ8WUZ0 217 aaPredicted RBP7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 MISP3Q96FF7 219 aa7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 COX4I2Q96KJ9 171 aa7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 DPH2Q9BQC3 489 aaPredicted RBP7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 PCDHB14Q9Y5E9 798 aa7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 PCDHGB7Q9Y5F8 929 aa7.51□□□□□ -1.21
SOX2-OT-207ENST00000476964 TMEM265A0A087WTH1 108 aa7.5□□□□□ -1.21
SOX2-OT-207ENST00000476964 SLC22A31A6NKX4 558 aa7.5□□□□□ -1.21
SOX2-OT-207ENST00000476964 YARSP54577 528 aaKnown RBP7.5□□□□□ -1.21
SOX2-OT-207ENST00000476964 GP2P55259 537 aaKnown RBP7.5□□□□□ -1.21
SOX2-OT-207ENST00000476964 SEZ6Q53EL9 994 aa7.5□□□□□ -1.21
SOX2-OT-207ENST00000476964 SFRP5Q5T4F7 317 aa7.5□□□□□ -1.21
SOX2-OT-207ENST00000476964 CDH24Q86UP0 819 aa7.5□□□□□ -1.21
SOX2-OT-207ENST00000476964 SPACA3Q8IXA5 215 aa7.5□□□□□ -1.21
SOX2-OT-207ENST00000476964 ZNF654Q8IZM8 581 aa7.5□□□□□ -1.21
SOX2-OT-207ENST00000476964 FAM13CQ8NE31 585 aa7.5□□□□□ -1.21
SOX2-OT-207ENST00000476964 CYB5D2Q8WUJ1 264 aa7.5□□□□□ -1.21
SOX2-OT-207ENST00000476964 NKD1Q969G9 470 aa7.5□□□□□ -1.21
SOX2-OT-207ENST00000476964 CLCQ05315 142 aa7.49□□□□□ -1.21
SOX2-OT-207ENST00000476964 NT5DC4Q86YG4 428 aa7.49□□□□□ -1.21
SOX2-OT-207ENST00000476964 STK11IPQ8N1F8 1099 aa7.49□□□□□ -1.21
SOX2-OT-207ENST00000476964 ZNF428Q96B54 188 aa7.49□□□□□ -1.21
SOX2-OT-207ENST00000476964 FBXL18Q96ME1 805 aa7.49□□□□□ -1.21
SOX2-OT-207ENST00000476964 PAK6Q9NQU5 681 aaPredicted RBP7.49□□□□□ -1.21
SOX2-OT-207ENST00000476964 TPX2Q9ULW0 747 aaKnown RBP7.49□□□□□ -1.21
SOX2-OT-207ENST00000476964 PRR33A8MZF0 331 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms