RNA–Protein interactions for RNA: ENST00000476798.1

SCML4-210, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 2

Gene SCML4, Length 2,679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-210ENST00000476798 C11orf91Q3C1V1 193 aa13.12□□□□□ -0.31
SCML4-210ENST00000476798 SEC62Q99442 399 aaKnown RBP13.12□□□□□ -0.31
SCML4-210ENST00000476798 KAT6BQ8WYB5 2073 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 SBF2Q86WG5 1849 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 MAP3K15Q6ZN16 1313 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 COL5A3P25940 1745 aaPredicted RBP13.11□□□□□ -0.31
SCML4-210ENST00000476798 PTPDC1A2A3K4 754 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 CTAGE15A4D2H0 777 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 IRF6O14896 467 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 NEBLO76041 1014 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 CTDNEP1O95476 244 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
SCML4-210ENST00000476798 CTAGE8P0CG41 777 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 CTAGE6Q86UF2 777 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 CTAGE4Q8IX94 777 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 XAGE2Q96GT9 111 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 VEZTQ9HBM0 779 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 RTEL1Q9NZ71 1219 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 HMG20BQ9P0W2 317 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 BTAF1O14981 1849 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 KIF3CO14782 793 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 KIF5CO60282 957 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 BIRC2Q13490 618 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 ZNF569Q5MCW4 686 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 WDR93Q6P2C0 686 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 TMED8Q6PL24 325 aaPredicted RBP13.11□□□□□ -0.31
SCML4-210ENST00000476798 TTLL7Q6ZT98 887 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 BCAS4Q8TDM0 211 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 LLPHQ9BRT6 129 aaKnown RBP13.11□□□□□ -0.31
SCML4-210ENST00000476798 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.11□□□□□ -0.31
SCML4-210ENST00000476798 SLC24A3Q9HC58 644 aa13.11□□□□□ -0.31
SCML4-210ENST00000476798 MED23Q9ULK4 1368 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 CNTNAP4Q9C0A0 1308 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 SOWAHDA6NJG2 315 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 PPFIA3O75145 1194 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 TUBBP07437 444 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 TCIRG1Q13488 830 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 STK38Q15208 465 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 SF3A1Q15459 793 aaKnown RBP13.1□□□□□ -0.31
SCML4-210ENST00000476798 CWF19L2Q2TBE0 894 aaKnown RBP13.1□□□□□ -0.31
SCML4-210ENST00000476798 PREPLQ4J6C6 727 aaPredicted RBP13.1□□□□□ -0.31
SCML4-210ENST00000476798 RC3H1Q5TC82 1133 aaKnown RBP13.1□□□□□ -0.31
SCML4-210ENST00000476798 NAIF1Q69YI7 327 aaPredicted RBP13.1□□□□□ -0.31
SCML4-210ENST00000476798 KRT27Q7Z3Y8 459 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 CLASRPQ8N2M8 674 aaKnown RBP13.1□□□□□ -0.31
SCML4-210ENST00000476798 FAM76AQ8TAV0 307 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 LRRC2Q9BYS8 371 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 CLIC4Q9Y696 253 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 A0A087WZG4 1122 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 SHTN1A0MZ66 631 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 HIP1O00291 1037 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 PFKFB2O60825 505 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 GCFC2P16383 781 aaKnown RBP13.1□□□□□ -0.31
SCML4-210ENST00000476798 NF2P35240 595 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 RDXP35241 583 aaKnown RBP13.1□□□□□ -0.31
SCML4-210ENST00000476798 GGCXP38435 758 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 PIP4K2AP48426 406 aaPredicted RBP13.1□□□□□ -0.31
SCML4-210ENST00000476798 TUBB2AQ13885 445 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 HSP90AB4PQ58FF6 505 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 HSP90AA4PQ58FG1 418 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 INTS5Q6P9B9 1019 aaKnown RBP13.1□□□□□ -0.31
SCML4-210ENST00000476798 ZNF589Q86UQ0 364 aaPredicted RBP13.1□□□□□ -0.31
SCML4-210ENST00000476798 LINC00301Q8NCQ3 95 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 GPATCH3Q96I76 525 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 NEK1Q96PY6 1258 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 ISCA1Q9BUE6 129 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 TUBB2BQ9BVA1 445 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 CWC25Q9NXE8 425 aaPredicted RBP13.1□□□□□ -0.31
SCML4-210ENST00000476798 SAMM50Q9Y512 469 aa13.1□□□□□ -0.31
SCML4-210ENST00000476798 GRIN2DO15399 1336 aa13.09□□□□□ -0.31
SCML4-210ENST00000476798 CTAGE9A4FU28 777 aa13.09□□□□□ -0.31
SCML4-210ENST00000476798 H0YHG0 523 aa13.09□□□□□ -0.31
SCML4-210ENST00000476798 CHUKO15111 745 aa13.09□□□□□ -0.31
SCML4-210ENST00000476798 GIGYF2Q6Y7W6 1299 aaKnown RBP13.09□□□□□ -0.31
SCML4-210ENST00000476798 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.09□□□□□ -0.31
SCML4-210ENST00000476798 ZBTB1Q9Y2K1 713 aa13.09□□□□□ -0.31
SCML4-210ENST00000476798 AFDNP55196 1824 aaKnown RBP13.09□□□□□ -0.31
SCML4-210ENST00000476798 CRKLP46109 303 aaKnown RBP13.09□□□□□ -0.31
SCML4-210ENST00000476798 WHAMMP3Q1A5X7 153 aa13.09□□□□□ -0.31
SCML4-210ENST00000476798 SPECC1LQ69YQ0 1117 aa13.09□□□□□ -0.31
SCML4-210ENST00000476798 AMOTL1Q8IY63 956 aa13.09□□□□□ -0.31
SCML4-210ENST00000476798 TEX11Q8IYF3 940 aa13.09□□□□□ -0.31
SCML4-210ENST00000476798 SLC35F6Q8N357 371 aa13.09□□□□□ -0.31
SCML4-210ENST00000476798 ADGRG1Q9Y653 693 aa13.09□□□□□ -0.31
SCML4-210ENST00000476798 LY75O60449 1722 aa13.09□□□□□ -0.31
SCML4-210ENST00000476798 H7C1W4 665 aa13.08□□□□□ -0.31
SCML4-210ENST00000476798 EIF3HO15372 352 aaKnown RBP eCLIP13.08□□□□□ -0.31
SCML4-210ENST00000476798 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.31
SCML4-210ENST00000476798 FSBPO95073 299 aa13.08□□□□□ -0.31
SCML4-210ENST00000476798 PFKFB1P16118 471 aa13.08□□□□□ -0.31
SCML4-210ENST00000476798 CALRP27797 417 aaKnown RBP13.08□□□□□ -0.31
SCML4-210ENST00000476798 ITPK1Q13572 414 aa13.08□□□□□ -0.31
SCML4-210ENST00000476798 STIM1Q13586 685 aa13.08□□□□□ -0.31
SCML4-210ENST00000476798 TTC19Q6DKK2 380 aaPredicted RBP13.08□□□□□ -0.31
SCML4-210ENST00000476798 RAD9BQ6WBX8 426 aa13.08□□□□□ -0.31
SCML4-210ENST00000476798 RBM28Q9NW13 759 aaKnown RBP13.08□□□□□ -0.31
SCML4-210ENST00000476798 TUBE1Q9UJT0 475 aa13.08□□□□□ -0.31
SCML4-210ENST00000476798 ATP2B2Q01814 1243 aa13.08□□□□□ -0.32
SCML4-210ENST00000476798 PPFIA1Q13136 1202 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms