RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MUC3AQ02505 3323 aa14.07□□□□□ -0.16
BRCA1-213ENST00000476777 A0A1B0GUL7 405 aa14.07□□□□□ -0.16
BRCA1-213ENST00000476777 LDHCP07864 332 aa14.07□□□□□ -0.16
BRCA1-213ENST00000476777 MAPK4P31152 587 aa14.07□□□□□ -0.16
BRCA1-213ENST00000476777 CCL14Q16627 93 aa14.07□□□□□ -0.16
BRCA1-213ENST00000476777 Q3C1V9 767 aa14.07□□□□□ -0.16
BRCA1-213ENST00000476777 MORN1Q5T089 497 aa14.07□□□□□ -0.16
BRCA1-213ENST00000476777 TMOD4Q9NZQ9 345 aa14.07□□□□□ -0.16
BRCA1-213ENST00000476777 RBPJLQ9UBG7 517 aa14.07□□□□□ -0.16
BRCA1-213ENST00000476777 RGS2P41220 211 aa14.06□□□□□ -0.16
BRCA1-213ENST00000476777 GSTO1P78417 241 aa14.06□□□□□ -0.16
BRCA1-213ENST00000476777 JAG1P78504 1218 aa14.06□□□□□ -0.16
BRCA1-213ENST00000476777 PDE3AQ14432 1141 aa14.06□□□□□ -0.16
BRCA1-213ENST00000476777 MVPQ14764 893 aaKnown RBP14.06□□□□□ -0.16
BRCA1-213ENST00000476777 POTEEQ6S8J3 1075 aa14.06□□□□□ -0.16
BRCA1-213ENST00000476777 PI16Q6UXB8 463 aa14.06□□□□□ -0.16
BRCA1-213ENST00000476777 TBC1D9Q6ZT07 1266 aa14.06□□□□□ -0.16
BRCA1-213ENST00000476777 GPR142Q7Z601 462 aa14.06□□□□□ -0.16
BRCA1-213ENST00000476777 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
BRCA1-213ENST00000476777 PORCNQ9H237 461 aa14.06□□□□□ -0.16
BRCA1-213ENST00000476777 HMG20BQ9P0W2 317 aa14.06□□□□□ -0.16
BRCA1-213ENST00000476777 PI4KBQ9UBF8 816 aa14.06□□□□□ -0.16
BRCA1-213ENST00000476777 C19orf81C9J6K1 198 aa14.05□□□□□ -0.16
BRCA1-213ENST00000476777 ASNSP08243 561 aa14.05□□□□□ -0.16
BRCA1-213ENST00000476777 ERVK-9P63128 1117 aa14.05□□□□□ -0.16
BRCA1-213ENST00000476777 ERVK-24P63145 666 aa14.05□□□□□ -0.16
BRCA1-213ENST00000476777 TFCP2Q12800 502 aa14.05□□□□□ -0.16
BRCA1-213ENST00000476777 SHROOM1Q2M3G4 852 aaPredicted RBP14.05□□□□□ -0.16
BRCA1-213ENST00000476777 ALDH1L2Q3SY69 923 aa14.05□□□□□ -0.16
BRCA1-213ENST00000476777 TEX11Q8IYF3 940 aa14.05□□□□□ -0.16
BRCA1-213ENST00000476777 SPATA5Q8NB90 893 aa14.05□□□□□ -0.16
BRCA1-213ENST00000476777 FAM161BQ96MY7 647 aa14.05□□□□□ -0.16
BRCA1-213ENST00000476777 APBA2Q99767 749 aa14.05□□□□□ -0.16
BRCA1-213ENST00000476777 AKAP2Q9Y2D5 859 aa14.05□□□□□ -0.16
BRCA1-213ENST00000476777 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.05□□□□□ -0.16
BRCA1-213ENST00000476777 SIPA1L1O43166 1804 aa14.04□□□□□ -0.16
BRCA1-213ENST00000476777 USP17L10C9JJH3 530 aa14.04□□□□□ -0.16
BRCA1-213ENST00000476777 E9PSI1 815 aa14.04□□□□□ -0.16
BRCA1-213ENST00000476777 ANP32CO43423 234 aa14.04□□□□□ -0.16
BRCA1-213ENST00000476777 PLEKHH3Q7Z736 793 aa14.04□□□□□ -0.16
BRCA1-213ENST00000476777 SH3RF3Q8TEJ3 882 aaPredicted RBP14.04□□□□□ -0.16
BRCA1-213ENST00000476777 DHX36Q9H2U1 1008 aaKnown RBP14.04□□□□□ -0.16
BRCA1-213ENST00000476777 DNAJC18Q9H819 358 aa14.04□□□□□ -0.16
BRCA1-213ENST00000476777 RAI14Q9P0K7 980 aa14.04□□□□□ -0.16
BRCA1-213ENST00000476777 HDAC5Q9UQL6 1122 aa14.04□□□□□ -0.16
BRCA1-213ENST00000476777 METTL16Q86W50 562 aaKnown RBP14.03□□□□□ -0.16
BRCA1-213ENST00000476777 CCAR1Q8IX12 1150 aaKnown RBP14.03□□□□□ -0.16
BRCA1-213ENST00000476777 GTF3C2Q8WUA4 911 aaPredicted RBP14.03□□□□□ -0.16
BRCA1-213ENST00000476777 LBHD1Q9BQE6 289 aaPredicted RBP14.03□□□□□ -0.16
BRCA1-213ENST00000476777 PAGR1Q9BTK6 254 aa14.03□□□□□ -0.16
BRCA1-213ENST00000476777 SENP6Q9GZR1 1112 aaPredicted RBP14.03□□□□□ -0.16
BRCA1-213ENST00000476777 SMC4Q9NTJ3 1288 aa14.03□□□□□ -0.16
BRCA1-213ENST00000476777 GDF11O95390 407 aa14.02□□□□□ -0.17
BRCA1-213ENST00000476777 ARID4AP29374 1257 aaPredicted RBP14.02□□□□□ -0.17
BRCA1-213ENST00000476777 MAP2K5Q13163 448 aa14.02□□□□□ -0.17
BRCA1-213ENST00000476777 ZNF697Q5TEC3 545 aa14.02□□□□□ -0.17
BRCA1-213ENST00000476777 NEUROD6Q96NK8 337 aa14.02□□□□□ -0.17
BRCA1-213ENST00000476777 MEIS3Q99687 375 aa14.02□□□□□ -0.17
BRCA1-213ENST00000476777 EMILIN3Q9NT22 766 aa14.02□□□□□ -0.17
BRCA1-213ENST00000476777 GINM1Q9NU53 330 aa14.02□□□□□ -0.17
BRCA1-213ENST00000476777 FLRT1Q9NZU1 646 aa14.02□□□□□ -0.17
BRCA1-213ENST00000476777 ZBTB21Q9ULJ3 1066 aa14.02□□□□□ -0.17
BRCA1-213ENST00000476777 FRMPD3Q5JV73 1810 aa14.01□□□□□ -0.17
BRCA1-213ENST00000476777 MYO9BQ13459 2157 aa14.01□□□□□ -0.17
BRCA1-213ENST00000476777 MCAMP43121 646 aa14.01□□□□□ -0.17
BRCA1-213ENST00000476777 SLFN5Q08AF3 891 aa14.01□□□□□ -0.17
BRCA1-213ENST00000476777 FOXP4Q8IVH2 680 aaPredicted RBP14.01□□□□□ -0.17
BRCA1-213ENST00000476777 CDX2Q99626 313 aaPredicted RBP14.01□□□□□ -0.17
BRCA1-213ENST00000476777 AATFQ9NY61 560 aaKnown RBP eCLIP14.01□□□□□ -0.17
BRCA1-213ENST00000476777 LRP2BPQ9P2M1 347 aa14.01□□□□□ -0.17
BRCA1-213ENST00000476777 NOB1Q9ULX3 412 aaKnown RBP14.01□□□□□ -0.17
BRCA1-213ENST00000476777 MAST2Q6P0Q8 1798 aa14.01□□□□□ -0.17
BRCA1-213ENST00000476777 FLT1P17948 1338 aa14□□□□□ -0.17
BRCA1-213ENST00000476777 SRGAP3O43295 1099 aa14□□□□□ -0.17
BRCA1-213ENST00000476777 CNMDO75829 334 aa14□□□□□ -0.17
BRCA1-213ENST00000476777 PLCG2P16885 1265 aa14□□□□□ -0.17
BRCA1-213ENST00000476777 ATN1P54259 1190 aaPredicted RBP14□□□□□ -0.17
BRCA1-213ENST00000476777 PPP4CP60510 307 aa14□□□□□ -0.17
BRCA1-213ENST00000476777 GORABQ5T7V8 394 aa14□□□□□ -0.17
BRCA1-213ENST00000476777 MFSD14CQ5VZR4 134 aa14□□□□□ -0.17
BRCA1-213ENST00000476777 USP17L2Q6R6M4 530 aa14□□□□□ -0.17
BRCA1-213ENST00000476777 MAPKAPK5Q8IW41 473 aa14□□□□□ -0.17
BRCA1-213ENST00000476777 TGFBRAP1Q8WUH2 860 aa14□□□□□ -0.17
BRCA1-213ENST00000476777 LPAR1Q92633 364 aa14□□□□□ -0.17
BRCA1-213ENST00000476777 EDC3Q96F86 508 aaKnown RBP14□□□□□ -0.17
BRCA1-213ENST00000476777 DDX20Q9UHI6 824 aaKnown RBP14□□□□□ -0.17
BRCA1-213ENST00000476777 PALD1Q9ULE6 856 aa14□□□□□ -0.17
BRCA1-213ENST00000476777 RABGAP1Q9Y3P9 1069 aa14□□□□□ -0.17
BRCA1-213ENST00000476777 BDP1A6H8Y1 2624 aa13.99□□□□□ -0.17
BRCA1-213ENST00000476777 MSCO60682 206 aa13.99□□□□□ -0.17
BRCA1-213ENST00000476777 BAG3O95817 575 aa13.99□□□□□ -0.17
BRCA1-213ENST00000476777 CCNA1P78396 465 aa13.99□□□□□ -0.17
BRCA1-213ENST00000476777 MTX1Q13505 466 aa13.99□□□□□ -0.17
BRCA1-213ENST00000476777 ADGRA1Q86SQ6 560 aa13.99□□□□□ -0.17
BRCA1-213ENST00000476777 CRACR2BQ8N4Y2 399 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-213ENST00000476777 NOL10Q9BSC4 688 aaKnown RBP13.99□□□□□ -0.17
BRCA1-213ENST00000476777 API5Q9BZZ5 524 aaKnown RBP13.99□□□□□ -0.17
BRCA1-213ENST00000476777 SEMA6BQ9H3T3 888 aa13.99□□□□□ -0.17
BRCA1-213ENST00000476777 NDUFB9Q9Y6M9 179 aa13.99□□□□□ -0.17
BRCA1-213ENST00000476777 CDK5RAP2Q96SN8 1893 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms