RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 NECAB3Q96P71 396 aaPredicted RBP9.16□□□□□ -0.94
NUP58-209ENST00000476553 BCO2Q9BYV7 579 aa9.16□□□□□ -0.94
NUP58-209ENST00000476553 CBX8Q9HC52 389 aa9.16□□□□□ -0.94
NUP58-209ENST00000476553 PICK1Q9NRD5 415 aa9.16□□□□□ -0.94
NUP58-209ENST00000476553 NUAK1O60285 661 aa9.15□□□□□ -0.94
NUP58-209ENST00000476553 SFRP5Q5T4F7 317 aa9.15□□□□□ -0.94
NUP58-209ENST00000476553 GRIN3AQ8TCU5 1115 aa9.15□□□□□ -0.94
NUP58-209ENST00000476553 SLC26A8Q96RN1 970 aa9.15□□□□□ -0.94
NUP58-209ENST00000476553 IGSF3O75054 1194 aa9.14□□□□□ -0.95
NUP58-209ENST00000476553 RAC2P15153 192 aa9.14□□□□□ -0.95
NUP58-209ENST00000476553 FGD1P98174 961 aa9.14□□□□□ -0.95
NUP58-209ENST00000476553 CDC37L1Q7L3B6 337 aa9.14□□□□□ -0.95
NUP58-209ENST00000476553 C3orf58Q8NDZ4 430 aa9.14□□□□□ -0.95
NUP58-209ENST00000476553 PPP4R2Q9NY27 417 aa9.14□□□□□ -0.95
NUP58-209ENST00000476553 BMP6P22004 513 aa9.13□□□□□ -0.95
NUP58-209ENST00000476553 DMRTB1Q96MA1 342 aa9.13□□□□□ -0.95
NUP58-209ENST00000476553 NLRP2Q9NX02 1062 aa9.13□□□□□ -0.95
NUP58-209ENST00000476553 SLAMF8Q9P0V8 285 aa9.13□□□□□ -0.95
NUP58-209ENST00000476553 TPX2Q9ULW0 747 aaKnown RBP9.13□□□□□ -0.95
NUP58-209ENST00000476553 AKAP2Q9Y2D5 859 aa9.13□□□□□ -0.95
NUP58-209ENST00000476553 ENC1O14682 589 aa9.12□□□□□ -0.95
NUP58-209ENST00000476553 TTC6Q86TZ1 520 aa9.12□□□□□ -0.95
NUP58-209ENST00000476553 HMGB1P09429 215 aaKnown RBP9.11□□□□□ -0.95
NUP58-209ENST00000476553 CAP2P40123 477 aa9.11□□□□□ -0.95
NUP58-209ENST00000476553 SLBPQ14493 270 aaKnown RBP eCLIP9.11□□□□□ -0.95
NUP58-209ENST00000476553 SCARA3Q6AZY7 606 aa9.11□□□□□ -0.95
NUP58-209ENST00000476553 RGS22Q8NE09 1264 aa9.11□□□□□ -0.95
NUP58-209ENST00000476553 ZNF507Q8TCN5 953 aa9.11□□□□□ -0.95
NUP58-209ENST00000476553 MIPEPQ99797 713 aa9.11□□□□□ -0.95
NUP58-209ENST00000476553 TRAIPQ9BWF2 469 aa9.11□□□□□ -0.95
NUP58-209ENST00000476553 FBRSQ9HAH7 460 aa9.11□□□□□ -0.95
NUP58-209ENST00000476553 DNAJC25-GNG10A0A024R161 153 aa9.1□□□□□ -0.95
NUP58-209ENST00000476553 PAGE1O75459 146 aa9.1□□□□□ -0.95
NUP58-209ENST00000476553 HPXP02790 462 aa9.1□□□□□ -0.95
NUP58-209ENST00000476553 CCDC82Q8N4S0 544 aa9.1□□□□□ -0.95
NUP58-209ENST00000476553 RELTQ969Z4 430 aa9.1□□□□□ -0.95
NUP58-209ENST00000476553 RBCK1Q9BYM8 510 aa9.1□□□□□ -0.95
NUP58-209ENST00000476553 PARD6AQ9NPB6 346 aa9.1□□□□□ -0.95
NUP58-209ENST00000476553 TMEM59LQ9UK28 342 aa9.1□□□□□ -0.95
NUP58-209ENST00000476553 EIF5BO60841 1220 aaKnown RBP9.09□□□□□ -0.95
NUP58-209ENST00000476553 ERVFC1P60507 584 aa9.09□□□□□ -0.95
NUP58-209ENST00000476553 RALGPS1Q5JS13 557 aa9.09□□□□□ -0.95
NUP58-209ENST00000476553 RASIP1Q5U651 963 aa9.09□□□□□ -0.95
NUP58-209ENST00000476553 B4GALNT3Q6L9W6 998 aa9.09□□□□□ -0.95
NUP58-209ENST00000476553 LLGL2Q6P1M3 1020 aa9.09□□□□□ -0.95
NUP58-209ENST00000476553 NXPE4Q6UWF7 544 aa9.09□□□□□ -0.95
NUP58-209ENST00000476553 TMC1Q8TDI8 760 aa9.09□□□□□ -0.95
NUP58-209ENST00000476553 PCDHA4Q9UN74 947 aa9.09□□□□□ -0.95
NUP58-209ENST00000476553 A0A0G2JLL6 359 aaPredicted RBP9.08□□□□□ -0.96
NUP58-209ENST00000476553 ESR1P03372 595 aa9.08□□□□□ -0.96
NUP58-209ENST00000476553 MYLIPQ8WY64 445 aa9.08□□□□□ -0.96
NUP58-209ENST00000476553 KCNN1Q92952 543 aa9.08□□□□□ -0.96
NUP58-209ENST00000476553 UBE2FQ969M7 185 aa9.08□□□□□ -0.96
NUP58-209ENST00000476553 IRF2BPLQ9H1B7 796 aa9.08□□□□□ -0.96
NUP58-209ENST00000476553 SAMM50Q9Y512 469 aa9.08□□□□□ -0.96
NUP58-209ENST00000476553 NKG7Q16617 165 aa9.07□□□□□ -0.96
NUP58-209ENST00000476553 KRTAP5-3Q6L8H2 238 aa9.07□□□□□ -0.96
NUP58-209ENST00000476553 ZNF746Q6NUN9 644 aaPredicted RBP9.07□□□□□ -0.96
NUP58-209ENST00000476553 MFSD2AQ8NA29 543 aa9.07□□□□□ -0.96
NUP58-209ENST00000476553 ELMO3Q96BJ8 720 aa9.07□□□□□ -0.96
NUP58-209ENST00000476553 TPTE2Q6XPS3 522 aa9.06□□□□□ -0.96
NUP58-209ENST00000476553 TMPRSS7Q7RTY8 843 aa9.06□□□□□ -0.96
NUP58-209ENST00000476553 COX4I2Q96KJ9 171 aa9.06□□□□□ -0.96
NUP58-209ENST00000476553 SP110Q9HB58 689 aa9.06□□□□□ -0.96
NUP58-209ENST00000476553 TNK2Q07912 1038 aa9.05□□□□□ -0.96
NUP58-209ENST00000476553 INPP5AQ14642 412 aa9.05□□□□□ -0.96
NUP58-209ENST00000476553 LETMD1Q6P1Q0 360 aa9.05□□□□□ -0.96
NUP58-209ENST00000476553 LRFN4Q6PJG9 635 aa9.05□□□□□ -0.96
NUP58-209ENST00000476553 RIN3Q8TB24 985 aa9.05□□□□□ -0.96
NUP58-209ENST00000476553 CEP44Q9C0F1 390 aa9.05□□□□□ -0.96
NUP58-209ENST00000476553 RNF32Q9H0A6 362 aa9.05□□□□□ -0.96
NUP58-209ENST00000476553 ZSWIM5Q9P217 1185 aa9.05□□□□□ -0.96
NUP58-209ENST00000476553 PPM1HQ9ULR3 514 aa9.05□□□□□ -0.96
NUP58-209ENST00000476553 USTQ9Y2C2 406 aa9.05□□□□□ -0.96
NUP58-209ENST00000476553 PRAMEF27A3QJZ7 478 aa9.04□□□□□ -0.96
NUP58-209ENST00000476553 KIR3DL1P43629 444 aa9.04□□□□□ -0.96
NUP58-209ENST00000476553 HK2P52789 917 aa9.04□□□□□ -0.96
NUP58-209ENST00000476553 LRRC14Q15048 493 aa9.04□□□□□ -0.96
NUP58-209ENST00000476553 ANKRD24Q8TF21 1146 aa9.04□□□□□ -0.96
NUP58-209ENST00000476553 KCNC2Q96PR1 638 aa9.04□□□□□ -0.96
NUP58-209ENST00000476553 FOXD2O60548 495 aaPredicted RBP9.03□□□□□ -0.96
NUP58-209ENST00000476553 CBX7O95931 251 aa9.03□□□□□ -0.96
NUP58-209ENST00000476553 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.03□□□□□ -0.96
NUP58-209ENST00000476553 IRF2BP1Q8IU81 584 aa9.03□□□□□ -0.96
NUP58-209ENST00000476553 BAHD1Q8TBE0 780 aaPredicted RBP9.03□□□□□ -0.96
NUP58-209ENST00000476553 WNT10AQ9GZT5 417 aa9.03□□□□□ -0.96
NUP58-209ENST00000476553 MCOLN1Q9GZU1 580 aa9.03□□□□□ -0.96
NUP58-209ENST00000476553 RBAK-RBAKDNI3L0D1 243 aa9.02□□□□□ -0.97
NUP58-209ENST00000476553 GSTT1P30711 240 aa9.02□□□□□ -0.97
NUP58-209ENST00000476553 DLG4P78352 724 aa9.02□□□□□ -0.97
NUP58-209ENST00000476553 PLPPR2Q96GM1 343 aa9.02□□□□□ -0.97
NUP58-209ENST00000476553 ZCCHC4Q9H5U6 513 aa9.02□□□□□ -0.97
NUP58-209ENST00000476553 SEMA7AO75326 666 aa9.01□□□□□ -0.97
NUP58-209ENST00000476553 FBXO24O75426 580 aa9.01□□□□□ -0.97
NUP58-209ENST00000476553 HSP90B1P14625 803 aaKnown RBP9.01□□□□□ -0.97
NUP58-209ENST00000476553 CDK11BP21127 795 aaKnown RBP9.01□□□□□ -0.97
NUP58-209ENST00000476553 TRHRP34981 398 aaPredicted RBP9.01□□□□□ -0.97
NUP58-209ENST00000476553 KRTAP10-2P60368 255 aa9.01□□□□□ -0.97
NUP58-209ENST00000476553 TMCO4Q5TGY1 634 aa9.01□□□□□ -0.97
NUP58-209ENST00000476553 AEBP1Q8IUX7 1158 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms