RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 SH3RF3Q8TEJ3 882 aaPredicted RBP20.32■□□□□ 0.84
APOBEC3F-203ENST00000476513 PORCNQ9H237 461 aa20.32■□□□□ 0.84
APOBEC3F-203ENST00000476513 RAI14Q9P0K7 980 aa20.32■□□□□ 0.84
APOBEC3F-203ENST00000476513 C19orf81C9J6K1 198 aa20.31■□□□□ 0.84
APOBEC3F-203ENST00000476513 ASNSP08243 561 aa20.31■□□□□ 0.84
APOBEC3F-203ENST00000476513 RGS2P41220 211 aa20.31■□□□□ 0.84
APOBEC3F-203ENST00000476513 ERVK-9P63128 1117 aa20.31■□□□□ 0.84
APOBEC3F-203ENST00000476513 ERVK-24P63145 666 aa20.31■□□□□ 0.84
APOBEC3F-203ENST00000476513 MORN1Q5T089 497 aa20.31■□□□□ 0.84
APOBEC3F-203ENST00000476513 POTEEQ6S8J3 1075 aa20.31■□□□□ 0.84
APOBEC3F-203ENST00000476513 GPR142Q7Z601 462 aa20.31■□□□□ 0.84
APOBEC3F-203ENST00000476513 NEUROD6Q96NK8 337 aa20.31■□□□□ 0.84
APOBEC3F-203ENST00000476513 ATAD5Q96QE3 1844 aa20.31■□□□□ 0.84
APOBEC3F-203ENST00000476513 SLFN5Q08AF3 891 aa20.3■□□□□ 0.84
APOBEC3F-203ENST00000476513 SHROOM1Q2M3G4 852 aaPredicted RBP20.3■□□□□ 0.84
APOBEC3F-203ENST00000476513 PLEKHH3Q7Z736 793 aa20.3■□□□□ 0.84
APOBEC3F-203ENST00000476513 MEIS3Q99687 375 aa20.3■□□□□ 0.84
APOBEC3F-203ENST00000476513 APBA2Q99767 749 aa20.3■□□□□ 0.84
APOBEC3F-203ENST00000476513 DHX36Q9H2U1 1008 aaKnown RBP20.3■□□□□ 0.84
APOBEC3F-203ENST00000476513 DNAJC18Q9H819 358 aa20.3■□□□□ 0.84
APOBEC3F-203ENST00000476513 USP17L10C9JJH3 530 aa20.29■□□□□ 0.84
APOBEC3F-203ENST00000476513 CCAR1Q8IX12 1150 aaKnown RBP20.29■□□□□ 0.84
APOBEC3F-203ENST00000476513 FAM161BQ96MY7 647 aa20.29■□□□□ 0.84
APOBEC3F-203ENST00000476513 PAGR1Q9BTK6 254 aa20.29■□□□□ 0.84
APOBEC3F-203ENST00000476513 NOB1Q9ULX3 412 aaKnown RBP20.29■□□□□ 0.84
APOBEC3F-203ENST00000476513 ARID4AP29374 1257 aaPredicted RBP20.28■□□□□ 0.84
APOBEC3F-203ENST00000476513 GORABQ5T7V8 394 aa20.28■□□□□ 0.84
APOBEC3F-203ENST00000476513 GTF3C2Q8WUA4 911 aaPredicted RBP20.28■□□□□ 0.84
APOBEC3F-203ENST00000476513 SRGAP3O43295 1099 aa20.27■□□□□ 0.84
APOBEC3F-203ENST00000476513 GDF11O95390 407 aa20.27■□□□□ 0.84
APOBEC3F-203ENST00000476513 MCAMP43121 646 aa20.27■□□□□ 0.84
APOBEC3F-203ENST00000476513 MAP2K5Q13163 448 aa20.27■□□□□ 0.84
APOBEC3F-203ENST00000476513 METTL16Q86W50 562 aaKnown RBP20.27■□□□□ 0.84
APOBEC3F-203ENST00000476513 LBHD1Q9BQE6 289 aaPredicted RBP20.27■□□□□ 0.84
APOBEC3F-203ENST00000476513 SENP6Q9GZR1 1112 aaPredicted RBP20.27■□□□□ 0.84
APOBEC3F-203ENST00000476513 EMILIN3Q9NT22 766 aa20.27■□□□□ 0.84
APOBEC3F-203ENST00000476513 GINM1Q9NU53 330 aa20.27■□□□□ 0.84
APOBEC3F-203ENST00000476513 LRP2BPQ9P2M1 347 aa20.27■□□□□ 0.84
APOBEC3F-203ENST00000476513 SIPA1L1O43166 1804 aa20.26■□□□□ 0.83
APOBEC3F-203ENST00000476513 FOXP4Q8IVH2 680 aaPredicted RBP20.26■□□□□ 0.83
APOBEC3F-203ENST00000476513 MAPKAPK5Q8IW41 473 aa20.26■□□□□ 0.83
APOBEC3F-203ENST00000476513 TGFBRAP1Q8WUH2 860 aa20.26■□□□□ 0.83
APOBEC3F-203ENST00000476513 NOL10Q9BSC4 688 aaKnown RBP20.26■□□□□ 0.83
APOBEC3F-203ENST00000476513 API5Q9BZZ5 524 aaKnown RBP20.26■□□□□ 0.83
APOBEC3F-203ENST00000476513 AATFQ9NY61 560 aaKnown RBP eCLIP20.26■□□□□ 0.83
APOBEC3F-203ENST00000476513 ZBTB21Q9ULJ3 1066 aa20.26■□□□□ 0.83
APOBEC3F-203ENST00000476513 UNC80Q8N2C7 3258 aa20.25■□□□□ 0.83
APOBEC3F-203ENST00000476513 MTX1Q13505 466 aa20.25■□□□□ 0.83
APOBEC3F-203ENST00000476513 CRACR2BQ8N4Y2 399 aaPredicted RBP20.25■□□□□ 0.83
APOBEC3F-203ENST00000476513 EDC3Q96F86 508 aaKnown RBP20.25■□□□□ 0.83
APOBEC3F-203ENST00000476513 CWC22Q9HCG8 908 aaKnown RBP20.25■□□□□ 0.83
APOBEC3F-203ENST00000476513 FLRT1Q9NZU1 646 aa20.25■□□□□ 0.83
APOBEC3F-203ENST00000476513 PALD1Q9ULE6 856 aa20.25■□□□□ 0.83
APOBEC3F-203ENST00000476513 FLT1P17948 1338 aa20.25■□□□□ 0.83
APOBEC3F-203ENST00000476513 CNMDO75829 334 aa20.24■□□□□ 0.83
APOBEC3F-203ENST00000476513 BAG3O95817 575 aa20.24■□□□□ 0.83
APOBEC3F-203ENST00000476513 PLCG2P16885 1265 aa20.24■□□□□ 0.83
APOBEC3F-203ENST00000476513 ATN1P54259 1190 aaPredicted RBP20.24■□□□□ 0.83
APOBEC3F-203ENST00000476513 MFSD14CQ5VZR4 134 aa20.24■□□□□ 0.83
APOBEC3F-203ENST00000476513 CDCA7LQ96GN5 454 aa20.24■□□□□ 0.83
APOBEC3F-203ENST00000476513 TRIM34Q9BYJ4 488 aa20.24■□□□□ 0.83
APOBEC3F-203ENST00000476513 DDX20Q9UHI6 824 aaKnown RBP20.24■□□□□ 0.83
APOBEC3F-203ENST00000476513 NDUFB9Q9Y6M9 179 aa20.24■□□□□ 0.83
APOBEC3F-203ENST00000476513 UQCRFS1P1P0C7P4 283 aa20.23■□□□□ 0.83
APOBEC3F-203ENST00000476513 PPP4CP60510 307 aa20.23■□□□□ 0.83
APOBEC3F-203ENST00000476513 ZNF697Q5TEC3 545 aa20.23■□□□□ 0.83
APOBEC3F-203ENST00000476513 NAA16Q6N069 864 aaPredicted RBP20.23■□□□□ 0.83
APOBEC3F-203ENST00000476513 USP17L2Q6R6M4 530 aa20.23■□□□□ 0.83
APOBEC3F-203ENST00000476513 RABGAP1Q9Y3P9 1069 aa20.23■□□□□ 0.83
APOBEC3F-203ENST00000476513 GLRX3O76003 335 aaKnown RBP20.22■□□□□ 0.83
APOBEC3F-203ENST00000476513 ADGRA1Q86SQ6 560 aa20.22■□□□□ 0.83
APOBEC3F-203ENST00000476513 LPAR1Q92633 364 aa20.22■□□□□ 0.83
APOBEC3F-203ENST00000476513 SNRKQ9NRH2 765 aa20.22■□□□□ 0.83
APOBEC3F-203ENST00000476513 SLC15A5A6NIM6 579 aa20.21■□□□□ 0.83
APOBEC3F-203ENST00000476513 GNAI3P08754 354 aa20.21■□□□□ 0.83
APOBEC3F-203ENST00000476513 CNGA1P29973 690 aa20.21■□□□□ 0.83
APOBEC3F-203ENST00000476513 RTP1P59025 263 aa20.21■□□□□ 0.83
APOBEC3F-203ENST00000476513 CCNA1P78396 465 aa20.21■□□□□ 0.83
APOBEC3F-203ENST00000476513 CDX2Q99626 313 aaPredicted RBP20.21■□□□□ 0.83
APOBEC3F-203ENST00000476513 PRKAG2Q9UGJ0 569 aa20.21■□□□□ 0.83
APOBEC3F-203ENST00000476513 SAP30BPQ9UHR5 308 aaKnown RBP20.21■□□□□ 0.83
APOBEC3F-203ENST00000476513 USP17L15C9J2P7 530 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 USP17L13C9JLJ4 530 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 USP17L11C9JVI0 530 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 USP17L18D6R9N7 530 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 USP17L22D6RA61 530 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 USP17L17D6RBQ6 530 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 USP17L19D6RCP7 530 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 USP17L20D6RJB6 530 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 DNM1LO00429 736 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 MSCO60682 206 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 GH2P01242 217 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 PTPREP23469 700 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 ATP2B2Q01814 1243 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 USP17L24Q0WX57 530 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 ZYXQ15942 572 aaKnown RBP20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 WDR78Q5VTH9 848 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 C12orf42Q96LP6 360 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 MAST2Q6P0Q8 1798 aa20.2■□□□□ 0.82
APOBEC3F-203ENST00000476513 HOXC6P09630 235 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms