RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 NOL9Q5SY16 702 aaKnown RBP17.17■□□□□ 0.34
CCNL1-217ENST00000476367 C12orf60Q5U649 245 aa17.17■□□□□ 0.34
CCNL1-217ENST00000476367 CCDC84Q86UT8 332 aaPredicted RBP17.17■□□□□ 0.34
CCNL1-217ENST00000476367 STK11IPQ8N1F8 1099 aa17.17■□□□□ 0.34
CCNL1-217ENST00000476367 NKX2-3Q8TAU0 364 aa17.17■□□□□ 0.34
CCNL1-217ENST00000476367 PICK1Q9NRD5 415 aa17.17■□□□□ 0.34
CCNL1-217ENST00000476367 ZMYM6O95789 1325 aa17.16■□□□□ 0.34
CCNL1-217ENST00000476367 MINDY4BA8MYZ0 360 aa17.16■□□□□ 0.34
CCNL1-217ENST00000476367 CTNND1O60716 968 aaKnown RBP17.16■□□□□ 0.34
CCNL1-217ENST00000476367 KIF23Q02241 960 aaPredicted RBP17.16■□□□□ 0.34
CCNL1-217ENST00000476367 SHROOM1Q2M3G4 852 aaPredicted RBP17.16■□□□□ 0.34
CCNL1-217ENST00000476367 ERO1BQ86YB8 467 aa17.16■□□□□ 0.34
CCNL1-217ENST00000476367 ZBTB48P10074 688 aaPredicted RBP17.15■□□□□ 0.34
CCNL1-217ENST00000476367 SHMT1P34896 483 aa17.15■□□□□ 0.34
CCNL1-217ENST00000476367 CAP2P40123 477 aa17.15■□□□□ 0.34
CCNL1-217ENST00000476367 MFAP1P55081 439 aaKnown RBP17.15■□□□□ 0.34
CCNL1-217ENST00000476367 JMYQ8N9B5 988 aa17.15■□□□□ 0.34
CCNL1-217ENST00000476367 MAP2K2P36507 400 aa17.14■□□□□ 0.33
CCNL1-217ENST00000476367 INCENPQ9NQS7 918 aa17.14■□□□□ 0.33
CCNL1-217ENST00000476367 ROBO3Q96MS0 1386 aa17.14■□□□□ 0.33
CCNL1-217ENST00000476367 IRF6O14896 467 aa17.14■□□□□ 0.33
CCNL1-217ENST00000476367 PTPRAP18433 802 aa17.14■□□□□ 0.33
CCNL1-217ENST00000476367 JAG1P78504 1218 aa17.14■□□□□ 0.33
CCNL1-217ENST00000476367 COL9A3Q14050 684 aaPredicted RBP17.14■□□□□ 0.33
CCNL1-217ENST00000476367 GREB1LQ9C091 1923 aaPredicted RBP17.13■□□□□ 0.33
CCNL1-217ENST00000476367 PPATQ06203 517 aa17.13■□□□□ 0.33
CCNL1-217ENST00000476367 PPIL2Q13356 520 aa17.13■□□□□ 0.33
CCNL1-217ENST00000476367 NECTIN1Q15223 517 aa17.13■□□□□ 0.33
CCNL1-217ENST00000476367 CERKLQ49MI3 558 aaPredicted RBP17.13■□□□□ 0.33
CCNL1-217ENST00000476367 TATDN1Q6P1N9 297 aa17.13■□□□□ 0.33
CCNL1-217ENST00000476367 C16orf86Q6ZW13 317 aa17.13■□□□□ 0.33
CCNL1-217ENST00000476367 ANO2Q9NQ90 1003 aa17.13■□□□□ 0.33
CCNL1-217ENST00000476367 SWAP70Q9UH65 585 aa17.13■□□□□ 0.33
CCNL1-217ENST00000476367 ANAPC4Q9UJX5 808 aa17.13■□□□□ 0.33
CCNL1-217ENST00000476367 ZBTB21Q9ULJ3 1066 aa17.13■□□□□ 0.33
CCNL1-217ENST00000476367 ZHX2Q9Y6X8 837 aa17.13■□□□□ 0.33
CCNL1-217ENST00000476367 MPHOSPH10O00566 681 aaKnown RBP17.12■□□□□ 0.33
CCNL1-217ENST00000476367 GH2P01242 217 aa17.12■□□□□ 0.33
CCNL1-217ENST00000476367 ASNSP08243 561 aa17.12■□□□□ 0.33
CCNL1-217ENST00000476367 CYP21A2P08686 494 aa17.12■□□□□ 0.33
CCNL1-217ENST00000476367 CDK8P49336 464 aa17.12■□□□□ 0.33
CCNL1-217ENST00000476367 PPARAQ07869 468 aa17.12■□□□□ 0.33
CCNL1-217ENST00000476367 RBM8AQ9Y5S9 174 aaKnown RBP17.12■□□□□ 0.33
CCNL1-217ENST00000476367 MANSC4A6NHS7 340 aaPredicted RBP17.11■□□□□ 0.33
CCNL1-217ENST00000476367 FGRP09769 529 aa17.11■□□□□ 0.33
CCNL1-217ENST00000476367 HAND2P61296 217 aa17.11■□□□□ 0.33
CCNL1-217ENST00000476367 CTDSPL2Q05D32 466 aa17.11■□□□□ 0.33
CCNL1-217ENST00000476367 SREBF2Q12772 1141 aa17.11■□□□□ 0.33
CCNL1-217ENST00000476367 ABCB5Q2M3G0 1257 aa17.11■□□□□ 0.33
CCNL1-217ENST00000476367 CASC1Q6TDU7 716 aa17.11■□□□□ 0.33
CCNL1-217ENST00000476367 TBC1D10CQ8IV04 446 aa17.11■□□□□ 0.33
CCNL1-217ENST00000476367 USP26Q9BXU7 913 aa17.11■□□□□ 0.33
CCNL1-217ENST00000476367 TRIM75PA6NK02 468 aa17.1■□□□□ 0.33
CCNL1-217ENST00000476367 MAP2K1Q02750 393 aaPredicted RBP17.1■□□□□ 0.33
CCNL1-217ENST00000476367 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCNL1-217ENST00000476367 CCL15-CCL14A0A0B4J2E2 113 aa17.1■□□□□ 0.33
CCNL1-217ENST00000476367 USP17L5A8MUK1 530 aa17.1■□□□□ 0.33
CCNL1-217ENST00000476367 GTF2A2P52657 109 aa17.1■□□□□ 0.33
CCNL1-217ENST00000476367 SNAPC2Q13487 334 aa17.1■□□□□ 0.33
CCNL1-217ENST00000476367 RAB3GAP1Q15042 981 aa17.1■□□□□ 0.33
CCNL1-217ENST00000476367 CCL15Q16663 113 aa17.1■□□□□ 0.33
CCNL1-217ENST00000476367 STOX1Q6ZVD7 989 aa17.1■□□□□ 0.33
CCNL1-217ENST00000476367 MS4A4AQ96JQ5 239 aa17.1■□□□□ 0.33
CCNL1-217ENST00000476367 CABP5Q9NP86 173 aa17.1■□□□□ 0.33
CCNL1-217ENST00000476367 LOC285556D6RIA3 1793 aa17.09■□□□□ 0.33
CCNL1-217ENST00000476367 PRDM1O75626 825 aa17.09■□□□□ 0.33
CCNL1-217ENST00000476367 HSPA1AP0DMV8 641 aaKnown RBP17.09■□□□□ 0.33
CCNL1-217ENST00000476367 HSPA1BP0DMV9 641 aaKnown RBP17.09■□□□□ 0.33
CCNL1-217ENST00000476367 AKR1B1P15121 316 aa17.09■□□□□ 0.33
CCNL1-217ENST00000476367 RASEFQ8IZ41 740 aa17.09■□□□□ 0.33
CCNL1-217ENST00000476367 BRI3BPQ8WY22 251 aa17.09■□□□□ 0.33
CCNL1-217ENST00000476367 KCNB2Q92953 911 aa17.09■□□□□ 0.33
CCNL1-217ENST00000476367 BEGAINQ9BUH8 593 aa17.09■□□□□ 0.33
CCNL1-217ENST00000476367 MKNK2Q9HBH9 465 aa17.09■□□□□ 0.33
CCNL1-217ENST00000476367 AFG3L2Q9Y4W6 797 aa17.09■□□□□ 0.33
CCNL1-217ENST00000476367 SLC3A2P08195 630 aaKnown RBP17.08■□□□□ 0.32
CCNL1-217ENST00000476367 SPP2Q13103 211 aa17.08■□□□□ 0.32
CCNL1-217ENST00000476367 SEPT2Q15019 361 aa17.08■□□□□ 0.32
CCNL1-217ENST00000476367 CLEC10AQ8IUN9 316 aa17.08■□□□□ 0.32
CCNL1-217ENST00000476367 AS3MTQ9HBK9 375 aa17.08■□□□□ 0.32
CCNL1-217ENST00000476367 WBP1LQ9NX94 342 aa17.08■□□□□ 0.32
CCNL1-217ENST00000476367 TAOK2Q9UL54 1235 aa17.08■□□□□ 0.32
CCNL1-217ENST00000476367 KCNH4Q9UQ05 1017 aa17.08■□□□□ 0.32
CCNL1-217ENST00000476367 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
CCNL1-217ENST00000476367 IGF2BP3O00425 579 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCNL1-217ENST00000476367 SLC27A2O14975 620 aa17.07■□□□□ 0.32
CCNL1-217ENST00000476367 CETPP11597 493 aa17.07■□□□□ 0.32
CCNL1-217ENST00000476367 RASA1P20936 1047 aa17.07■□□□□ 0.32
CCNL1-217ENST00000476367 PDE4BQ07343 736 aa17.07■□□□□ 0.32
CCNL1-217ENST00000476367 CREB3L3Q68CJ9 461 aa17.07■□□□□ 0.32
CCNL1-217ENST00000476367 KIAA1211Q6ZU35 1233 aa17.07■□□□□ 0.32
CCNL1-217ENST00000476367 REM2Q8IYK8 340 aaPredicted RBP17.07■□□□□ 0.32
CCNL1-217ENST00000476367 ZNF280CQ8ND82 737 aa17.07■□□□□ 0.32
CCNL1-217ENST00000476367 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCNL1-217ENST00000476367 BACH2Q9BYV9 841 aa17.07■□□□□ 0.32
CCNL1-217ENST00000476367 GINM1Q9NU53 330 aa17.07■□□□□ 0.32
CCNL1-217ENST00000476367 TSKSQ9UJT2 592 aa17.07■□□□□ 0.32
CCNL1-217ENST00000476367 MYH4Q9Y623 1939 aa17.07■□□□□ 0.32
CCNL1-217ENST00000476367 NEDD4P46934 1319 aa17.07■□□□□ 0.32
CCNL1-217ENST00000476367 REC8O95072 547 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms