RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 MAGEA10P43363 369 aaPredicted RBP13.64□□□□□ -0.23
EXOSC1-208ENST00000476234 HMGCS2P54868 508 aa13.64□□□□□ -0.23
EXOSC1-208ENST00000476234 PI16Q6UXB8 463 aa13.64□□□□□ -0.23
EXOSC1-208ENST00000476234 ERICH6Q7L0X2 663 aa13.64□□□□□ -0.23
EXOSC1-208ENST00000476234 TDHQ8IZJ6 230 aa13.64□□□□□ -0.23
EXOSC1-208ENST00000476234 NSUN4Q96CB9 384 aaKnown RBP13.64□□□□□ -0.23
EXOSC1-208ENST00000476234 WDR18Q9BV38 432 aa13.64□□□□□ -0.23
EXOSC1-208ENST00000476234 MTMR10Q9NXD2 777 aa13.64□□□□□ -0.23
EXOSC1-208ENST00000476234 CUL9Q8IWT3 2517 aa13.64□□□□□ -0.23
EXOSC1-208ENST00000476234 PFASO15067 1338 aa13.64□□□□□ -0.23
EXOSC1-208ENST00000476234 ATAD5Q96QE3 1844 aa13.63□□□□□ -0.23
EXOSC1-208ENST00000476234 HOXA7P31268 230 aaPredicted RBP13.63□□□□□ -0.23
EXOSC1-208ENST00000476234 MVPQ14764 893 aaKnown RBP13.63□□□□□ -0.23
EXOSC1-208ENST00000476234 PANK1Q8TE04 598 aa13.63□□□□□ -0.23
EXOSC1-208ENST00000476234 USP6NLQ92738 828 aa13.63□□□□□ -0.23
EXOSC1-208ENST00000476234 HMG20BQ9P0W2 317 aa13.63□□□□□ -0.23
EXOSC1-208ENST00000476234 HERC5Q9UII4 1024 aaKnown RBP13.63□□□□□ -0.23
EXOSC1-208ENST00000476234 LDHCP07864 332 aa13.62□□□□□ -0.23
EXOSC1-208ENST00000476234 SYN1P17600 705 aa13.62□□□□□ -0.23
EXOSC1-208ENST00000476234 GSTO1P78417 241 aa13.62□□□□□ -0.23
EXOSC1-208ENST00000476234 ATP8B2P98198 1209 aa13.62□□□□□ -0.23
EXOSC1-208ENST00000476234 Q7L0L9 218 aa13.62□□□□□ -0.23
EXOSC1-208ENST00000476234 SSH3Q8TE77 659 aa13.62□□□□□ -0.23
EXOSC1-208ENST00000476234 AS3MTQ9HBK9 375 aa13.62□□□□□ -0.23
EXOSC1-208ENST00000476234 AKAP2Q9Y2D5 859 aa13.62□□□□□ -0.23
EXOSC1-208ENST00000476234 SIPA1L1O43166 1804 aa13.62□□□□□ -0.23
EXOSC1-208ENST00000476234 PRKAR2AP13861 404 aaKnown RBP13.61□□□□□ -0.23
EXOSC1-208ENST00000476234 BACE1P56817 501 aa13.61□□□□□ -0.23
EXOSC1-208ENST00000476234 METTL16Q86W50 562 aaKnown RBP13.61□□□□□ -0.23
EXOSC1-208ENST00000476234 TRMT44Q8IYL2 757 aaKnown RBP13.61□□□□□ -0.23
EXOSC1-208ENST00000476234 SOCS4Q8WXH5 440 aa13.61□□□□□ -0.23
EXOSC1-208ENST00000476234 NEUROD6Q96NK8 337 aa13.61□□□□□ -0.23
EXOSC1-208ENST00000476234 P2RX7Q99572 595 aaKnown RBP13.61□□□□□ -0.23
EXOSC1-208ENST00000476234 NUDT12Q9BQG2 462 aa13.61□□□□□ -0.23
EXOSC1-208ENST00000476234 TXNRD2Q9NNW7 524 aa13.61□□□□□ -0.23
EXOSC1-208ENST00000476234 CYP2B6P20813 491 aa13.6□□□□□ -0.23
EXOSC1-208ENST00000476234 JAG1P78504 1218 aa13.6□□□□□ -0.23
EXOSC1-208ENST00000476234 LHX8Q68G74 356 aa13.6□□□□□ -0.23
EXOSC1-208ENST00000476234 POTEEQ6S8J3 1075 aa13.6□□□□□ -0.23
EXOSC1-208ENST00000476234 TBC1D9Q6ZT07 1266 aa13.6□□□□□ -0.23
EXOSC1-208ENST00000476234 ITPRIPQ8IWB1 547 aa13.6□□□□□ -0.23
EXOSC1-208ENST00000476234 SPATA5Q8NB90 893 aa13.6□□□□□ -0.23
EXOSC1-208ENST00000476234 GPRC5AQ8NFJ5 357 aa13.6□□□□□ -0.23
EXOSC1-208ENST00000476234 UBE2OQ9C0C9 1292 aaKnown RBP13.6□□□□□ -0.23
EXOSC1-208ENST00000476234 PI4KBQ9UBF8 816 aa13.6□□□□□ -0.23
EXOSC1-208ENST00000476234 RBPJLQ9UBG7 517 aa13.6□□□□□ -0.23
EXOSC1-208ENST00000476234 C19orf81C9J6K1 198 aa13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 ASNSP08243 561 aa13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 ARID4AP29374 1257 aaPredicted RBP13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 MAPK4P31152 587 aa13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 HERVK_113P62684 666 aa13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 IRX3P78415 501 aaPredicted RBP13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 CACNB2Q08289 660 aaPredicted RBP13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 G3BP1Q13283 466 aaKnown RBP eCLIP13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 MTMR2Q13614 643 aa13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 MORN1Q5T089 497 aa13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 FAM109BQ6ICB4 259 aaPredicted RBP13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 DHX36Q9H2U1 1008 aaKnown RBP13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 DNAJC18Q9H819 358 aa13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 GINM1Q9NU53 330 aa13.59□□□□□ -0.23
EXOSC1-208ENST00000476234 POTEB2H3BUK9 544 aa13.58□□□□□ -0.24
EXOSC1-208ENST00000476234 PEX10O60683 326 aa13.58□□□□□ -0.24
EXOSC1-208ENST00000476234 MCAMP43121 646 aa13.58□□□□□ -0.24
EXOSC1-208ENST00000476234 PPP4CP60510 307 aa13.58□□□□□ -0.24
EXOSC1-208ENST00000476234 Q3C1V9 767 aa13.58□□□□□ -0.24
EXOSC1-208ENST00000476234 FTSJ3Q8IY81 847 aaKnown RBP13.58□□□□□ -0.24
EXOSC1-208ENST00000476234 TEX11Q8IYF3 940 aa13.58□□□□□ -0.24
EXOSC1-208ENST00000476234 SH3RF3Q8TEJ3 882 aaPredicted RBP13.58□□□□□ -0.24
EXOSC1-208ENST00000476234 DBNDD2Q9BQY9 259 aa13.58□□□□□ -0.24
EXOSC1-208ENST00000476234 TLR7Q9NYK1 1049 aaKnown RBP13.58□□□□□ -0.24
EXOSC1-208ENST00000476234 NOP58Q9Y2X3 529 aaKnown RBP13.58□□□□□ -0.24
EXOSC1-208ENST00000476234 MYO5AQ9Y4I1 1855 aaKnown RBP13.58□□□□□ -0.24
EXOSC1-208ENST00000476234 SURF6O75683 361 aaKnown RBP13.57□□□□□ -0.24
EXOSC1-208ENST00000476234 ZKSCAN1P17029 563 aaPredicted RBP13.57□□□□□ -0.24
EXOSC1-208ENST00000476234 ERVK-9P63128 1117 aa13.57□□□□□ -0.24
EXOSC1-208ENST00000476234 ERVK-24P63145 666 aa13.57□□□□□ -0.24
EXOSC1-208ENST00000476234 LRRC26Q2I0M4 334 aa13.57□□□□□ -0.24
EXOSC1-208ENST00000476234 TNNI3KQ59H18 835 aa13.57□□□□□ -0.24
EXOSC1-208ENST00000476234 CEP85Q6P2H3 762 aa13.57□□□□□ -0.24
EXOSC1-208ENST00000476234 FOXP4Q8IVH2 680 aaPredicted RBP13.57□□□□□ -0.24
EXOSC1-208ENST00000476234 GTF3C2Q8WUA4 911 aaPredicted RBP13.57□□□□□ -0.24
EXOSC1-208ENST00000476234 PORCNQ9H237 461 aa13.57□□□□□ -0.24
EXOSC1-208ENST00000476234 TMOD4Q9NZQ9 345 aa13.57□□□□□ -0.24
EXOSC1-208ENST00000476234 RAI14Q9P0K7 980 aa13.57□□□□□ -0.24
EXOSC1-208ENST00000476234 FPGT-TNNI3KV9GXZ4 949 aa13.57□□□□□ -0.24
EXOSC1-208ENST00000476234 USP17L10C9JJH3 530 aa13.56□□□□□ -0.24
EXOSC1-208ENST00000476234 CCND3P30281 292 aaPredicted RBP13.56□□□□□ -0.24
EXOSC1-208ENST00000476234 RGS2P41220 211 aa13.56□□□□□ -0.24
EXOSC1-208ENST00000476234 PDE3AQ14432 1141 aa13.56□□□□□ -0.24
EXOSC1-208ENST00000476234 CCL14Q16627 93 aa13.56□□□□□ -0.24
EXOSC1-208ENST00000476234 GPR142Q7Z601 462 aa13.56□□□□□ -0.24
EXOSC1-208ENST00000476234 APBA2Q99767 749 aa13.56□□□□□ -0.24
EXOSC1-208ENST00000476234 COL25A1Q9BXS0 654 aaPredicted RBP13.56□□□□□ -0.24
EXOSC1-208ENST00000476234 SNRKQ9NRH2 765 aa13.56□□□□□ -0.24
EXOSC1-208ENST00000476234 EMILIN3Q9NT22 766 aa13.56□□□□□ -0.24
EXOSC1-208ENST00000476234 UNC80Q8N2C7 3258 aa13.56□□□□□ -0.24
EXOSC1-208ENST00000476234 IGSF3O75054 1194 aa13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 IGHA2P01877 340 aa13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 UQCRFS1P1P0C7P4 283 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms