RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 PLPPR2Q96GM1 343 aa8.02□□□□□ -1.13
PTCD3-211ENST00000476215 WNT10AQ9GZT5 417 aa8.02□□□□□ -1.13
PTCD3-211ENST00000476215 TNKS2Q9H2K2 1166 aa8.02□□□□□ -1.13
PTCD3-211ENST00000476215 ACBD3Q9H3P7 528 aa8.02□□□□□ -1.13
PTCD3-211ENST00000476215 PRDM10Q9NQV6 1147 aa8.02□□□□□ -1.13
PTCD3-211ENST00000476215 CSADQ9Y600 493 aa8.02□□□□□ -1.13
PTCD3-211ENST00000476215 GFRA2O00451 464 aa8.01□□□□□ -1.13
PTCD3-211ENST00000476215 F13A1P00488 732 aa8.01□□□□□ -1.13
PTCD3-211ENST00000476215 GARTP22102 1010 aa8.01□□□□□ -1.13
PTCD3-211ENST00000476215 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-211ENST00000476215 TOP6BLQ8N6T0 577 aa8.01□□□□□ -1.13
PTCD3-211ENST00000476215 ELMO3Q96BJ8 720 aa8.01□□□□□ -1.13
PTCD3-211ENST00000476215 HEXIM2Q96MH2 286 aaKnown RBP8.01□□□□□ -1.13
PTCD3-211ENST00000476215 LRIG2O94898 1065 aa8□□□□□ -1.13
PTCD3-211ENST00000476215 SLBPQ14493 270 aaKnown RBP eCLIP8□□□□□ -1.13
PTCD3-211ENST00000476215 AGBL5Q8NDL9 886 aa8□□□□□ -1.13
PTCD3-211ENST00000476215 GATAD2BQ8WXI9 593 aa8□□□□□ -1.13
PTCD3-211ENST00000476215 SSU72Q9NP77 194 aaKnown RBP8□□□□□ -1.13
PTCD3-211ENST00000476215 KCNQ5Q9NR82 932 aa8□□□□□ -1.13
PTCD3-211ENST00000476215 GREM1O60565 184 aa7.99□□□□□ -1.13
PTCD3-211ENST00000476215 BPNT1O95861 308 aa7.99□□□□□ -1.13
PTCD3-211ENST00000476215 CEACAM5P06731 702 aa7.99□□□□□ -1.13
PTCD3-211ENST00000476215 PAK2Q13177 524 aa7.99□□□□□ -1.13
PTCD3-211ENST00000476215 WIPI1Q5MNZ9 446 aaPredicted RBP7.99□□□□□ -1.13
PTCD3-211ENST00000476215 FAM196AQ6ZSG2 479 aa7.99□□□□□ -1.13
PTCD3-211ENST00000476215 C22orf34Q6ZV56 151 aa7.99□□□□□ -1.13
PTCD3-211ENST00000476215 ARMCX6Q7L4S7 300 aa7.99□□□□□ -1.13
PTCD3-211ENST00000476215 PLD6Q8N2A8 252 aaKnown RBP7.99□□□□□ -1.13
PTCD3-211ENST00000476215 KRTAP9-2Q9BYQ4 174 aa7.99□□□□□ -1.13
PTCD3-211ENST00000476215 UBP1Q9NZI7 540 aa7.99□□□□□ -1.13
PTCD3-211ENST00000476215 VAV3Q9UKW4 847 aa7.99□□□□□ -1.13
PTCD3-211ENST00000476215 PLAGL2Q9UPG8 496 aa7.99□□□□□ -1.13
PTCD3-211ENST00000476215 INPP5FQ9Y2H2 1132 aa7.99□□□□□ -1.13
PTCD3-211ENST00000476215 FAM221AA4D161 298 aa7.98□□□□□ -1.13
PTCD3-211ENST00000476215 TLR3O15455 904 aaKnown RBP7.98□□□□□ -1.13
PTCD3-211ENST00000476215 EOMESO95936 686 aa7.98□□□□□ -1.13
PTCD3-211ENST00000476215 TNNI2P48788 182 aa7.98□□□□□ -1.13
PTCD3-211ENST00000476215 CDK8P49336 464 aa7.98□□□□□ -1.13
PTCD3-211ENST00000476215 PRKCQQ04759 706 aa7.98□□□□□ -1.13
PTCD3-211ENST00000476215 IFI16Q16666 785 aaKnown RBP7.98□□□□□ -1.13
PTCD3-211ENST00000476215 FAM181AQ8N9Y4 354 aa7.98□□□□□ -1.13
PTCD3-211ENST00000476215 FLCNQ8NFG4 579 aa7.98□□□□□ -1.13
PTCD3-211ENST00000476215 FBXO27Q8NI29 283 aa7.98□□□□□ -1.13
PTCD3-211ENST00000476215 EAF1Q96JC9 268 aaPredicted RBP7.98□□□□□ -1.13
PTCD3-211ENST00000476215 FMNL2Q96PY5 1086 aa7.98□□□□□ -1.13
PTCD3-211ENST00000476215 FBRSQ9HAH7 460 aa7.98□□□□□ -1.13
PTCD3-211ENST00000476215 CAPN10Q9HC96 672 aa7.98□□□□□ -1.13
PTCD3-211ENST00000476215 SLC5A6Q9Y289 635 aa7.98□□□□□ -1.13
PTCD3-211ENST00000476215 CILPO75339 1184 aa7.97□□□□□ -1.13
PTCD3-211ENST00000476215 ZC3H6P61129 1189 aaKnown RBP7.97□□□□□ -1.13
PTCD3-211ENST00000476215 RPL6Q02878 288 aaKnown RBP7.97□□□□□ -1.13
PTCD3-211ENST00000476215 APOBRQ0VD83 1088 aa7.97□□□□□ -1.13
PTCD3-211ENST00000476215 CDC37L1Q7L3B6 337 aa7.97□□□□□ -1.13
PTCD3-211ENST00000476215 NT5C1AQ9BXI3 368 aa7.97□□□□□ -1.13
PTCD3-211ENST00000476215 PICK1Q9NRD5 415 aa7.97□□□□□ -1.13
PTCD3-211ENST00000476215 GTF2IRD1Q9UHL9 959 aa7.97□□□□□ -1.13
PTCD3-211ENST00000476215 SNX11Q9Y5W9 270 aa7.97□□□□□ -1.13
PTCD3-211ENST00000476215 TAL1P17542 331 aaPredicted RBP7.96□□□□□ -1.14
PTCD3-211ENST00000476215 ITGB5P18084 799 aa7.96□□□□□ -1.14
PTCD3-211ENST00000476215 CRKP46108 304 aa7.96□□□□□ -1.14
PTCD3-211ENST00000476215 MPP2Q14168 576 aa7.96□□□□□ -1.14
PTCD3-211ENST00000476215 SPRED2Q7Z698 418 aa7.96□□□□□ -1.14
PTCD3-211ENST00000476215 HID1Q8IV36 788 aa7.96□□□□□ -1.14
PTCD3-211ENST00000476215 MFSD2AQ8NA29 543 aa7.96□□□□□ -1.14
PTCD3-211ENST00000476215 FOXQ1Q9C009 403 aa7.96□□□□□ -1.14
PTCD3-211ENST00000476215 MAPK8IP1Q9UQF2 711 aa7.96□□□□□ -1.14
PTCD3-211ENST00000476215 ROBO2Q9HCK4 1378 aa7.96□□□□□ -1.14
PTCD3-211ENST00000476215 TMEM265A0A087WTH1 108 aa7.95□□□□□ -1.14
PTCD3-211ENST00000476215 PRAMEF27A3QJZ7 478 aa7.95□□□□□ -1.14
PTCD3-211ENST00000476215 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
PTCD3-211ENST00000476215 CST3P01034 146 aaPredicted RBP7.95□□□□□ -1.14
PTCD3-211ENST00000476215 GNL2Q13823 731 aaKnown RBP7.95□□□□□ -1.14
PTCD3-211ENST00000476215 NKG7Q16617 165 aa7.95□□□□□ -1.14
PTCD3-211ENST00000476215 CWF19L2Q2TBE0 894 aaKnown RBP7.95□□□□□ -1.14
PTCD3-211ENST00000476215 SEZ6Q53EL9 994 aa7.95□□□□□ -1.14
PTCD3-211ENST00000476215 NKD1Q969G9 470 aa7.95□□□□□ -1.14
PTCD3-211ENST00000476215 GPRASP2Q96D09 838 aa7.95□□□□□ -1.14
PTCD3-211ENST00000476215 SLITRK5O94991 958 aa7.94□□□□□ -1.14
PTCD3-211ENST00000476215 FUT4P22083 530 aa7.94□□□□□ -1.14
PTCD3-211ENST00000476215 REC114Q7Z4M0 266 aa7.94□□□□□ -1.14
PTCD3-211ENST00000476215 SPACA3Q8IXA5 215 aa7.94□□□□□ -1.14
PTCD3-211ENST00000476215 TP53INP2Q8IXH6 220 aa7.94□□□□□ -1.14
PTCD3-211ENST00000476215 MRPL41Q8IXM3 137 aaKnown RBP7.94□□□□□ -1.14
PTCD3-211ENST00000476215 LRRC3Q9BY71 257 aa7.94□□□□□ -1.14
PTCD3-211ENST00000476215 ZNF865P0CJ78 1059 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-211ENST00000476215 GRK4P32298 578 aa7.93□□□□□ -1.14
PTCD3-211ENST00000476215 GJA8P48165 433 aa7.93□□□□□ -1.14
PTCD3-211ENST00000476215 NKPD1Q17RQ9 610 aa7.93□□□□□ -1.14
PTCD3-211ENST00000476215 NAALADL2Q58DX5 795 aa7.93□□□□□ -1.14
PTCD3-211ENST00000476215 ZNF574Q6ZN55 896 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-211ENST00000476215 HRASLS5Q96KN8 279 aa7.93□□□□□ -1.14
PTCD3-211ENST00000476215 KRTAP4-12Q9BQ66 201 aa7.93□□□□□ -1.14
PTCD3-211ENST00000476215 TINF2Q9BSI4 451 aa7.93□□□□□ -1.14
PTCD3-211ENST00000476215 ADAM30Q9UKF2 790 aa7.93□□□□□ -1.14
PTCD3-211ENST00000476215 KRTAP9-6A0A140TA67 174 aa7.92□□□□□ -1.14
PTCD3-211ENST00000476215 GRIN3BO60391 1043 aa7.92□□□□□ -1.14
PTCD3-211ENST00000476215 CD8BP10966 210 aa7.92□□□□□ -1.14
PTCD3-211ENST00000476215 MCM4P33991 863 aa7.92□□□□□ -1.14
PTCD3-211ENST00000476215 CLCN7P51798 805 aa7.92□□□□□ -1.14
PTCD3-211ENST00000476215 ETF1P62495 437 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms