RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 ASCC2Q9H1I8 757 aaPredicted RBP10.26□□□□□ -0.77
SATB1-213ENST00000476178 CHMP4BQ9H444 224 aaKnown RBP10.26□□□□□ -0.77
SATB1-213ENST00000476178 FLT1P17948 1338 aa10.26□□□□□ -0.77
SATB1-213ENST00000476178 RBBP6Q7Z6E9 1792 aaKnown RBP10.25□□□□□ -0.77
SATB1-213ENST00000476178 C19orf81C9J6K1 198 aa10.25□□□□□ -0.77
SATB1-213ENST00000476178 RAB11FIP3O75154 756 aa10.25□□□□□ -0.77
SATB1-213ENST00000476178 HMMRO75330 724 aa10.25□□□□□ -0.77
SATB1-213ENST00000476178 BACE1P56817 501 aa10.25□□□□□ -0.77
SATB1-213ENST00000476178 IRF5Q13568 498 aa10.25□□□□□ -0.77
SATB1-213ENST00000476178 SH3D19Q5HYK7 790 aa10.25□□□□□ -0.77
SATB1-213ENST00000476178 CERS3Q8IU89 383 aa10.25□□□□□ -0.77
SATB1-213ENST00000476178 SHISA4Q96DD7 197 aa10.25□□□□□ -0.77
SATB1-213ENST00000476178 KIF1BPQ96EK5 621 aa10.25□□□□□ -0.77
SATB1-213ENST00000476178 DEFB118Q96PH6 123 aa10.25□□□□□ -0.77
SATB1-213ENST00000476178 WDR18Q9BV38 432 aa10.25□□□□□ -0.77
SATB1-213ENST00000476178 COLQQ9Y215 455 aaPredicted RBP10.25□□□□□ -0.77
SATB1-213ENST00000476178 DOCK1Q14185 1865 aa10.25□□□□□ -0.77
SATB1-213ENST00000476178 CEP290O15078 2479 aa10.24□□□□□ -0.77
SATB1-213ENST00000476178 USP17L10C9JJH3 530 aa10.24□□□□□ -0.77
SATB1-213ENST00000476178 FARP2O94887 1054 aaPredicted RBP10.24□□□□□ -0.77
SATB1-213ENST00000476178 SGPL1O95470 568 aa10.24□□□□□ -0.77
SATB1-213ENST00000476178 JAG1P78504 1218 aa10.24□□□□□ -0.77
SATB1-213ENST00000476178 TTC6Q86TZ1 520 aa10.24□□□□□ -0.77
SATB1-213ENST00000476178 METTL16Q86W50 562 aaKnown RBP10.24□□□□□ -0.77
SATB1-213ENST00000476178 CLASRPQ8N2M8 674 aaKnown RBP10.24□□□□□ -0.77
SATB1-213ENST00000476178 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.24□□□□□ -0.77
SATB1-213ENST00000476178 P2RX7Q99572 595 aaKnown RBP10.24□□□□□ -0.77
SATB1-213ENST00000476178 FEZ1Q99689 392 aa10.24□□□□□ -0.77
SATB1-213ENST00000476178 GINM1Q9NU53 330 aa10.24□□□□□ -0.77
SATB1-213ENST00000476178 ZBTB21Q9ULJ3 1066 aa10.24□□□□□ -0.77
SATB1-213ENST00000476178 NR2E3Q9Y5X4 410 aa10.24□□□□□ -0.77
SATB1-213ENST00000476178 GH2P01242 217 aa10.23□□□□□ -0.77
SATB1-213ENST00000476178 IFIT2P09913 472 aaKnown RBP10.23□□□□□ -0.77
SATB1-213ENST00000476178 SHROOM1Q2M3G4 852 aaPredicted RBP10.23□□□□□ -0.77
SATB1-213ENST00000476178 GPRC5AQ8NFJ5 357 aa10.23□□□□□ -0.77
SATB1-213ENST00000476178 DNAJC18Q9H819 358 aa10.23□□□□□ -0.77
SATB1-213ENST00000476178 CWC22Q9HCG8 908 aaKnown RBP10.23□□□□□ -0.77
SATB1-213ENST00000476178 MYO5AQ9Y4I1 1855 aaKnown RBP10.23□□□□□ -0.77
SATB1-213ENST00000476178 MAST2Q6P0Q8 1798 aa10.22□□□□□ -0.77
SATB1-213ENST00000476178 MAGEB6P1A0A0J9YX57 407 aa10.22□□□□□ -0.77
SATB1-213ENST00000476178 EVI5O60447 810 aa10.22□□□□□ -0.77
SATB1-213ENST00000476178 HMGCRP04035 888 aa10.22□□□□□ -0.77
SATB1-213ENST00000476178 POLR3DP05423 398 aaPredicted RBP10.22□□□□□ -0.77
SATB1-213ENST00000476178 CYP2B6P20813 491 aa10.22□□□□□ -0.77
SATB1-213ENST00000476178 HOXA7P31268 230 aaPredicted RBP10.22□□□□□ -0.77
SATB1-213ENST00000476178 HERVK_113P62684 666 aa10.22□□□□□ -0.77
SATB1-213ENST00000476178 RAB3GAP1Q15042 981 aa10.22□□□□□ -0.77
SATB1-213ENST00000476178 TTF1Q15361 905 aaPredicted RBP10.22□□□□□ -0.77
SATB1-213ENST00000476178 ZYXQ15942 572 aaKnown RBP10.22□□□□□ -0.77
SATB1-213ENST00000476178 CERKLQ49MI3 558 aaPredicted RBP10.22□□□□□ -0.77
SATB1-213ENST00000476178 TMED8Q6PL24 325 aaPredicted RBP10.22□□□□□ -0.77
SATB1-213ENST00000476178 USP17L2Q6R6M4 530 aa10.22□□□□□ -0.77
SATB1-213ENST00000476178 CHRDL2Q6WN34 429 aa10.22□□□□□ -0.77
SATB1-213ENST00000476178 RIOK1Q9BRS2 568 aaKnown RBP10.22□□□□□ -0.77
SATB1-213ENST00000476178 PAGR1Q9BTK6 254 aa10.22□□□□□ -0.77
SATB1-213ENST00000476178 CABP5Q9NP86 173 aa10.22□□□□□ -0.77
SATB1-213ENST00000476178 SERPINB13Q9UIV8 391 aa10.22□□□□□ -0.77
SATB1-213ENST00000476178 PEX10O60683 326 aa10.21□□□□□ -0.77
SATB1-213ENST00000476178 CAPN2P17655 700 aa10.21□□□□□ -0.77
SATB1-213ENST00000476178 ABCB5Q2M3G0 1257 aa10.21□□□□□ -0.77
SATB1-213ENST00000476178 SLC9C2Q5TAH2 1124 aa10.21□□□□□ -0.77
SATB1-213ENST00000476178 EDC3Q96F86 508 aaKnown RBP10.21□□□□□ -0.77
SATB1-213ENST00000476178 DNAJC2Q99543 621 aaKnown RBP10.21□□□□□ -0.77
SATB1-213ENST00000476178 NUDT12Q9BQG2 462 aa10.21□□□□□ -0.77
SATB1-213ENST00000476178 CRNKL1Q9BZJ0 848 aaKnown RBP10.21□□□□□ -0.77
SATB1-213ENST00000476178 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.21□□□□□ -0.77
SATB1-213ENST00000476178 DCTPP1Q9H773 170 aa10.21□□□□□ -0.77
SATB1-213ENST00000476178 HMX1Q9NP08 348 aaPredicted RBP10.21□□□□□ -0.77
SATB1-213ENST00000476178 EMILIN3Q9NT22 766 aa10.21□□□□□ -0.77
SATB1-213ENST00000476178 MORF4L1Q9UBU8 362 aa10.21□□□□□ -0.77
SATB1-213ENST00000476178 GJD2Q9UKL4 321 aa10.21□□□□□ -0.77
SATB1-213ENST00000476178 PHIPQ8WWQ0 1821 aa10.21□□□□□ -0.78
SATB1-213ENST00000476178 MGAMO43451 1857 aa10.21□□□□□ -0.78
SATB1-213ENST00000476178 PTPRFP10586 1907 aa10.21□□□□□ -0.78
SATB1-213ENST00000476178 TCRBV5S4A2TA0A5A2 114 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 GOLIM4O00461 696 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 MPHOSPH10O00566 681 aaKnown RBP10.2□□□□□ -0.78
SATB1-213ENST00000476178 SIPA1L1O43166 1804 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 SMARCA5O60264 1052 aaPredicted RBP10.2□□□□□ -0.78
SATB1-213ENST00000476178 PDE6AP16499 860 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 ATP5JP18859 108 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 MAPK4P31152 587 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 WDR78Q5VTH9 848 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 TATDN1Q6P1N9 297 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 UBE2Q1Q7Z7E8 422 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 GTF3C2Q8WUA4 911 aaPredicted RBP10.2□□□□□ -0.78
SATB1-213ENST00000476178 PAWRQ96IZ0 340 aaKnown RBP10.2□□□□□ -0.78
SATB1-213ENST00000476178 LRRCC1Q9C099 1032 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 EHD4Q9H223 541 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 BOLA2Q9H3K6 86 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 TXNRD2Q9NNW7 524 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 PAK6Q9NQU5 681 aaPredicted RBP10.2□□□□□ -0.78
SATB1-213ENST00000476178 MCM9Q9NXL9 1143 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 RBPJLQ9UBG7 517 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 HTTP42858 3142 aa10.2□□□□□ -0.78
SATB1-213ENST00000476178 DOCK3Q8IZD9 2030 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 RPTORQ8N122 1335 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 ZNF532Q9HCE3 1301 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 USP17L15C9J2P7 530 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 USP17L13C9JLJ4 530 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms