RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 SEC62Q99442 399 aaKnown RBP7.98□□□□□ -1.13
UBR4-212ENST00000475973 ISCA1Q9BUE6 129 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 UTP14AQ9BVJ6 771 aaKnown RBP7.98□□□□□ -1.13
UBR4-212ENST00000475973 TMX1Q9H3N1 280 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 FAM217BQ9NTX9 383 aaPredicted RBP7.98□□□□□ -1.13
UBR4-212ENST00000475973 ANO10Q9NW15 660 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 OGFRQ9NZT2 677 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 TUBE1Q9UJT0 475 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 HPS5Q9UPZ3 1129 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 HPSEQ9Y251 543 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 PTPDC1A2A3K4 754 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 KIF2AO00139 706 aaPredicted RBP7.97□□□□□ -1.13
UBR4-212ENST00000475973 EYA2O00167 538 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 PPEF1O14829 653 aaPredicted RBP7.97□□□□□ -1.13
UBR4-212ENST00000475973 IKBKBO14920 756 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 RNF113AO15541 343 aaKnown RBP7.97□□□□□ -1.13
UBR4-212ENST00000475973 MYO1BO43795 1136 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 CHGBP05060 677 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 CSF1RP07333 972 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 IARSP41252 1262 aaKnown RBP7.97□□□□□ -1.13
UBR4-212ENST00000475973 KCNJ4P48050 445 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 GSDMDP57764 484 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 CAMK4Q16566 473 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 SUSD4Q5VX71 490 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 CCAR1Q8IX12 1150 aaKnown RBP7.97□□□□□ -1.13
UBR4-212ENST00000475973 ZNF34Q8IZ26 560 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 CCDC191Q8NCU4 936 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 FBXO18Q8NFZ0 1043 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 C7orf43Q8WVR3 580 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 PSMD1Q99460 953 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 HSD3B7Q9H2F3 369 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 ZNF277Q9NRM2 450 aaPredicted RBP7.97□□□□□ -1.13
UBR4-212ENST00000475973 PAG1Q9NWQ8 432 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 CLIP2Q9UDT6 1046 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 PCDHA7Q9UN72 937 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 TIAM2Q8IVF5 1701 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 MAST3O60307 1309 aa7.97□□□□□ -1.13
UBR4-212ENST00000475973 ANKRD31Q8N7Z5 1873 aa7.96□□□□□ -1.13
UBR4-212ENST00000475973 DTNBO60941 627 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 DDNO94850 711 aaPredicted RBP7.96□□□□□ -1.14
UBR4-212ENST00000475973 ZFYP08048 801 aaPredicted RBP7.96□□□□□ -1.14
UBR4-212ENST00000475973 TNNT1P13805 278 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 CMA1P23946 247 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 HOXA10P31260 410 aaPredicted RBP7.96□□□□□ -1.14
UBR4-212ENST00000475973 EIF6P56537 245 aaKnown RBP7.96□□□□□ -1.14
UBR4-212ENST00000475973 GABPB1Q06547 395 aaPredicted RBP7.96□□□□□ -1.14
UBR4-212ENST00000475973 AIMP1Q12904 312 aaKnown RBP7.96□□□□□ -1.14
UBR4-212ENST00000475973 CHAF1AQ13111 956 aaPredicted RBP7.96□□□□□ -1.14
UBR4-212ENST00000475973 SKIV2LQ15477 1246 aaKnown RBP7.96□□□□□ -1.14
UBR4-212ENST00000475973 PPP4R3BQ5MIZ7 849 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 DNTTIP2Q5QJE6 756 aaKnown RBP7.96□□□□□ -1.14
UBR4-212ENST00000475973 CCDC129Q6ZRS4 1044 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 BRAPQ7Z569 592 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 CREBRFQ8IUR6 639 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 CCAR2Q8N163 923 aaKnown RBP7.96□□□□□ -1.14
UBR4-212ENST00000475973 MPNDQ8N594 471 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 SPC24Q8NBT2 197 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 KCNG4Q8TDN1 519 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 KLRG1Q96E93 195 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 CRAMP1Q96RY5 1269 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 BEGAINQ9BUH8 593 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 TRIM5Q9C035 493 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.96□□□□□ -1.14
UBR4-212ENST00000475973 KIAA1468Q9P260 1216 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 CGNQ9P2M7 1197 aaKnown RBP7.96□□□□□ -1.14
UBR4-212ENST00000475973 ZMYM6O95789 1325 aa7.96□□□□□ -1.14
UBR4-212ENST00000475973 CEP350Q5VT06 3117 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 GOLGA6L4A6NEF3 574 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 PPP6R2O75170 966 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 H2AFXP16104 143 aaPredicted RBP7.95□□□□□ -1.14
UBR4-212ENST00000475973 LMOD1P29536 600 aaPredicted RBP7.95□□□□□ -1.14
UBR4-212ENST00000475973 ANTXR2P58335 489 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 E4F1Q66K89 784 aaPredicted RBP7.95□□□□□ -1.14
UBR4-212ENST00000475973 LMBR1LQ6UX01 489 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 LDHDQ86WU2 507 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 HOMEZQ8IX15 550 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 SYNE4Q8N205 404 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 SUPT20HQ8NEM7 779 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 NLRP7Q8WX94 980 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 MRPS27Q92552 414 aaKnown RBP7.95□□□□□ -1.14
UBR4-212ENST00000475973 OSBP2Q969R2 916 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 ERO1AQ96HE7 468 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 UBXN6Q9BZV1 441 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 SIL1Q9H173 461 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 TRMT112Q9UI30 125 aaKnown RBP7.95□□□□□ -1.14
UBR4-212ENST00000475973 HACL1Q9UJ83 578 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 ZNF541Q9H0D2 1346 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 WDR90Q96KV7 1748 aa7.95□□□□□ -1.14
UBR4-212ENST00000475973 USP27XA6NNY8 438 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 NLRP12P59046 1061 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 KIF23Q02241 960 aaPredicted RBP7.94□□□□□ -1.14
UBR4-212ENST00000475973 APOBRQ0VD83 1088 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 STK3Q13188 491 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 TCIRG1Q13488 830 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 SLC39A14Q15043 492 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 PTPAQ15257 358 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 ALX1Q15699 326 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 MYSM1Q5VVJ2 828 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 CEP135Q66GS9 1140 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 OLFM4Q6UX06 510 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms