RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 ZNF444Q8N0Y2 327 aaPredicted RBP21.25■□□□□ 0.99
ATG4B-217ENST00000475693 ZSCAN10Q96SZ4 725 aaPredicted RBP21.25■□□□□ 0.99
ATG4B-217ENST00000475693 UBAC1Q9BSL1 405 aa21.25■□□□□ 0.99
ATG4B-217ENST00000475693 HACL1Q9UJ83 578 aa21.25■□□□□ 0.99
ATG4B-217ENST00000475693 SHMT1P34896 483 aa21.24■□□□□ 0.99
ATG4B-217ENST00000475693 MIGA2Q7L4E1 593 aa21.24■□□□□ 0.99
ATG4B-217ENST00000475693 CSRNP1Q96S65 589 aa21.24■□□□□ 0.99
ATG4B-217ENST00000475693 HPS5Q9UPZ3 1129 aa21.24■□□□□ 0.99
ATG4B-217ENST00000475693 MYO1BO43795 1136 aa21.24■□□□□ 0.99
ATG4B-217ENST00000475693 PKP1Q13835 747 aa21.24■□□□□ 0.99
ATG4B-217ENST00000475693 SEC23AQ15436 765 aa21.24■□□□□ 0.99
ATG4B-217ENST00000475693 TSPY3P0CV98 308 aa21.23■□□□□ 0.99
ATG4B-217ENST00000475693 TSPY8P0CW00 308 aa21.23■□□□□ 0.99
ATG4B-217ENST00000475693 AKR1B1P15121 316 aa21.23■□□□□ 0.99
ATG4B-217ENST00000475693 WTAPQ15007 396 aa21.23■□□□□ 0.99
ATG4B-217ENST00000475693 CRACR2BQ8N4Y2 399 aaPredicted RBP21.23■□□□□ 0.99
ATG4B-217ENST00000475693 TMEM87BQ96K49 555 aa21.23■□□□□ 0.99
ATG4B-217ENST00000475693 GOLGA8BA8MQT2 603 aa21.23■□□□□ 0.99
ATG4B-217ENST00000475693 GRIN3BO60391 1043 aa21.23■□□□□ 0.99
ATG4B-217ENST00000475693 JAK2O60674 1132 aa21.23■□□□□ 0.99
ATG4B-217ENST00000475693 ENTPD3O75355 529 aa21.23■□□□□ 0.99
ATG4B-217ENST00000475693 HLA-DOAP06340 250 aa21.23■□□□□ 0.99
ATG4B-217ENST00000475693 RASA3Q14644 834 aa21.23■□□□□ 0.99
ATG4B-217ENST00000475693 RRP1BQ14684 758 aaKnown RBP21.23■□□□□ 0.99
ATG4B-217ENST00000475693 MICU3Q86XE3 530 aa21.23■□□□□ 0.99
ATG4B-217ENST00000475693 ZSCAN31Q96LW9 406 aaPredicted RBP21.23■□□□□ 0.99
ATG4B-217ENST00000475693 MTMR7Q9Y216 660 aa21.23■□□□□ 0.99
ATG4B-217ENST00000475693 ANGEL2Q5VTE6 544 aaKnown RBP21.22■□□□□ 0.99
ATG4B-217ENST00000475693 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.22■□□□□ 0.99
ATG4B-217ENST00000475693 PI4KBQ9UBF8 816 aa21.22■□□□□ 0.99
ATG4B-217ENST00000475693 SIPA1L1O43166 1804 aa21.22■□□□□ 0.99
ATG4B-217ENST00000475693 JAG1P78504 1218 aa21.21■□□□□ 0.99
ATG4B-217ENST00000475693 FAM151AQ8WW52 585 aa21.21■□□□□ 0.99
ATG4B-217ENST00000475693 FZD1Q9UP38 647 aa21.21■□□□□ 0.99
ATG4B-217ENST00000475693 WDR19Q8NEZ3 1342 aa21.21■□□□□ 0.99
ATG4B-217ENST00000475693 RCSD1Q6JBY9 416 aa21.21■□□□□ 0.99
ATG4B-217ENST00000475693 APOA5Q6Q788 366 aa21.21■□□□□ 0.99
ATG4B-217ENST00000475693 RASGRP2Q7LDG7 609 aa21.21■□□□□ 0.99
ATG4B-217ENST00000475693 IQCA1Q86XH1 822 aa21.21■□□□□ 0.99
ATG4B-217ENST00000475693 CMTR1Q8N1G2 835 aaKnown RBP21.21■□□□□ 0.99
ATG4B-217ENST00000475693 FBXL16Q8N461 479 aa21.21■□□□□ 0.99
ATG4B-217ENST00000475693 GTF3C6Q969F1 213 aa21.21■□□□□ 0.99
ATG4B-217ENST00000475693 DHX36Q9H2U1 1008 aaKnown RBP21.21■□□□□ 0.99
ATG4B-217ENST00000475693 SH2B1Q9NRF2 756 aaPredicted RBP21.21■□□□□ 0.99
ATG4B-217ENST00000475693 PFKFB2O60825 505 aa21.2■□□□□ 0.98
ATG4B-217ENST00000475693 GDF11O95390 407 aa21.2■□□□□ 0.98
ATG4B-217ENST00000475693 PCP11498 1178 aaKnown RBP21.2■□□□□ 0.98
ATG4B-217ENST00000475693 ADD1P35611 737 aaKnown RBP21.2■□□□□ 0.98
ATG4B-217ENST00000475693 DDIT3P35638 169 aa21.2■□□□□ 0.98
ATG4B-217ENST00000475693 DDX11Q96FC9 970 aa21.2■□□□□ 0.98
ATG4B-217ENST00000475693 TAOK2Q9UL54 1235 aa21.2■□□□□ 0.98
ATG4B-217ENST00000475693 ERICH2A1L162 156 aa21.2■□□□□ 0.98
ATG4B-217ENST00000475693 CCDC69A6NI79 296 aa21.2■□□□□ 0.98
ATG4B-217ENST00000475693 MPHOSPH10O00566 681 aaKnown RBP21.2■□□□□ 0.98
ATG4B-217ENST00000475693 CTDNEP1O95476 244 aa21.2■□□□□ 0.98
ATG4B-217ENST00000475693 CDC27P30260 824 aa21.2■□□□□ 0.98
ATG4B-217ENST00000475693 IFIT1BQ5T764 474 aaKnown RBP21.2■□□□□ 0.98
ATG4B-217ENST00000475693 FOXD4L5Q5VV16 416 aaPredicted RBP21.2■□□□□ 0.98
ATG4B-217ENST00000475693 NUP133Q8WUM0 1156 aa21.2■□□□□ 0.98
ATG4B-217ENST00000475693 FOXD4L4Q8WXT5 416 aaPredicted RBP21.2■□□□□ 0.98
ATG4B-217ENST00000475693 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.2■□□□□ 0.98
ATG4B-217ENST00000475693 PGAP2Q9UHJ9 254 aa21.2■□□□□ 0.98
ATG4B-217ENST00000475693 NPM3O75607 178 aaKnown RBP21.19■□□□□ 0.98
ATG4B-217ENST00000475693 LIFRP42702 1097 aa21.19■□□□□ 0.98
ATG4B-217ENST00000475693 EVCP57679 992 aa21.19■□□□□ 0.98
ATG4B-217ENST00000475693 SART3Q15020 963 aaKnown RBP21.19■□□□□ 0.98
ATG4B-217ENST00000475693 ZNF274Q96GC6 653 aaPredicted RBP21.19■□□□□ 0.98
ATG4B-217ENST00000475693 GGA3Q9NZ52 723 aa21.19■□□□□ 0.98
ATG4B-217ENST00000475693 STX8Q9UNK0 236 aa21.19■□□□□ 0.98
ATG4B-217ENST00000475693 SLC12A7Q9Y666 1083 aa21.19■□□□□ 0.98
ATG4B-217ENST00000475693 CCDC82Q8N4S0 544 aa21.19■□□□□ 0.98
ATG4B-217ENST00000475693 CEP95Q96GE4 821 aa21.19■□□□□ 0.98
ATG4B-217ENST00000475693 DPY19L2Q6NUT2 758 aa21.18■□□□□ 0.98
ATG4B-217ENST00000475693 SGMS1Q86VZ5 419 aa21.18■□□□□ 0.98
ATG4B-217ENST00000475693 DEFB129Q9H1M3 183 aa21.18■□□□□ 0.98
ATG4B-217ENST00000475693 ATRNL1Q5VV63 1379 aa21.17■□□□□ 0.98
ATG4B-217ENST00000475693 UBE2Q2LH0YL09 131 aa21.17■□□□□ 0.98
ATG4B-217ENST00000475693 GJB2P29033 226 aa21.17■□□□□ 0.98
ATG4B-217ENST00000475693 TEPSINQ96N21 525 aa21.17■□□□□ 0.98
ATG4B-217ENST00000475693 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.17■□□□□ 0.98
ATG4B-217ENST00000475693 FAM217BQ9NTX9 383 aaPredicted RBP21.17■□□□□ 0.98
ATG4B-217ENST00000475693 ZBTB43O43298 467 aa21.17■□□□□ 0.98
ATG4B-217ENST00000475693 LMOD1P29536 600 aaPredicted RBP21.17■□□□□ 0.98
ATG4B-217ENST00000475693 FOSBP53539 338 aa21.17■□□□□ 0.98
ATG4B-217ENST00000475693 ZNF654Q8IZM8 581 aa21.17■□□□□ 0.98
ATG4B-217ENST00000475693 NEDD1Q8NHV4 660 aa21.17■□□□□ 0.98
ATG4B-217ENST00000475693 TRIM34Q9BYJ4 488 aa21.17■□□□□ 0.98
ATG4B-217ENST00000475693 EHD4Q9H223 541 aa21.17■□□□□ 0.98
ATG4B-217ENST00000475693 RTN4Q9NQC3 1192 aaKnown RBP21.17■□□□□ 0.98
ATG4B-217ENST00000475693 NBPF12Q5TAG4 269 aaPredicted RBP21.16■□□□□ 0.98
ATG4B-217ENST00000475693 FOXP4Q8IVH2 680 aaPredicted RBP21.16■□□□□ 0.98
ATG4B-217ENST00000475693 ZNF287Q9HBT7 754 aa21.16■□□□□ 0.98
ATG4B-217ENST00000475693 SMC3Q9UQE7 1217 aa21.16■□□□□ 0.98
ATG4B-217ENST00000475693 POLR2AP24928 1970 aaKnown RBP21.16■□□□□ 0.98
ATG4B-217ENST00000475693 METAP2P50579 478 aaKnown RBP eCLIP21.16■□□□□ 0.98
ATG4B-217ENST00000475693 CERKLQ49MI3 558 aaPredicted RBP21.16■□□□□ 0.98
ATG4B-217ENST00000475693 FAM83AQ86UY5 434 aa21.16■□□□□ 0.98
ATG4B-217ENST00000475693 INTS4Q96HW7 963 aaKnown RBP21.16■□□□□ 0.98
ATG4B-217ENST00000475693 GLTPD2A6NH11 291 aa21.15■□□□□ 0.98
ATG4B-217ENST00000475693 FKBP1CQ5VVH2 108 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms