RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 GJD2Q9UKL4 321 aa15.22■□□□□ 0.03
CCDC57-208ENST00000475635 SURF6O75683 361 aaKnown RBP15.21■□□□□ 0.03
CCDC57-208ENST00000475635 JAG1P78504 1218 aa15.21■□□□□ 0.03
CCDC57-208ENST00000475635 ATP8B2P98198 1209 aa15.21■□□□□ 0.03
CCDC57-208ENST00000475635 SHROOM1Q2M3G4 852 aaPredicted RBP15.21■□□□□ 0.03
CCDC57-208ENST00000475635 NECAB2Q7Z6G3 386 aa15.21■□□□□ 0.03
CCDC57-208ENST00000475635 FOXP4Q8IVH2 680 aaPredicted RBP15.21■□□□□ 0.03
CCDC57-208ENST00000475635 CRACR2BQ8N4Y2 399 aaPredicted RBP15.21■□□□□ 0.03
CCDC57-208ENST00000475635 C1orf115Q9H7X2 142 aa15.21■□□□□ 0.03
CCDC57-208ENST00000475635 MORF4L1Q9UBU8 362 aa15.21■□□□□ 0.03
CCDC57-208ENST00000475635 PALD1Q9ULE6 856 aa15.21■□□□□ 0.03
CCDC57-208ENST00000475635 NAV1Q8NEY1 1877 aa15.2■□□□□ 0.02
CCDC57-208ENST00000475635 C19orf81C9J6K1 198 aa15.2■□□□□ 0.02
CCDC57-208ENST00000475635 GDF11O95390 407 aa15.2■□□□□ 0.02
CCDC57-208ENST00000475635 HOXA7P31268 230 aaPredicted RBP15.2■□□□□ 0.02
CCDC57-208ENST00000475635 ZAP70P43403 619 aa15.2■□□□□ 0.02
CCDC57-208ENST00000475635 TRIM32Q13049 653 aa15.2■□□□□ 0.02
CCDC57-208ENST00000475635 METTL16Q86W50 562 aaKnown RBP15.2■□□□□ 0.02
CCDC57-208ENST00000475635 ZNF512BQ96KM6 892 aaPredicted RBP15.2■□□□□ 0.02
CCDC57-208ENST00000475635 P2RX7Q99572 595 aaKnown RBP15.2■□□□□ 0.02
CCDC57-208ENST00000475635 PIH1D3Q9NQM4 214 aaKnown RBP15.2■□□□□ 0.02
CCDC57-208ENST00000475635 SAP30BPQ9UHR5 308 aaKnown RBP15.2■□□□□ 0.02
CCDC57-208ENST00000475635 ZBTB21Q9ULJ3 1066 aa15.2■□□□□ 0.02
CCDC57-208ENST00000475635 RPTORQ8N122 1335 aa15.19■□□□□ 0.02
CCDC57-208ENST00000475635 COL6A3P12111 3177 aa15.19■□□□□ 0.02
CCDC57-208ENST00000475635 USP17L10C9JJH3 530 aa15.19■□□□□ 0.02
CCDC57-208ENST00000475635 PEX10O60683 326 aa15.19■□□□□ 0.02
CCDC57-208ENST00000475635 HLA-DOAP06340 250 aa15.19■□□□□ 0.02
CCDC57-208ENST00000475635 HERVK_113P62684 666 aa15.19■□□□□ 0.02
CCDC57-208ENST00000475635 ANKLE1Q8NAG6 615 aa15.19■□□□□ 0.02
CCDC57-208ENST00000475635 GPRC5AQ8NFJ5 357 aa15.19■□□□□ 0.02
CCDC57-208ENST00000475635 TRIB2Q92519 343 aa15.19■□□□□ 0.02
CCDC57-208ENST00000475635 TXNRD2Q9NNW7 524 aa15.19■□□□□ 0.02
CCDC57-208ENST00000475635 HMX1Q9NP08 348 aaPredicted RBP15.19■□□□□ 0.02
CCDC57-208ENST00000475635 GINM1Q9NU53 330 aa15.19■□□□□ 0.02
CCDC57-208ENST00000475635 DBNLQ9UJU6 430 aaKnown RBP15.19■□□□□ 0.02
CCDC57-208ENST00000475635 IGSF3O75054 1194 aa15.18■□□□□ 0.02
CCDC57-208ENST00000475635 CYP2B6P20813 491 aa15.18■□□□□ 0.02
CCDC57-208ENST00000475635 CYP7A1P22680 504 aa15.18■□□□□ 0.02
CCDC57-208ENST00000475635 DYNLL1P63167 89 aaKnown RBP15.18■□□□□ 0.02
CCDC57-208ENST00000475635 TLR7Q9NYK1 1049 aaKnown RBP15.18■□□□□ 0.02
CCDC57-208ENST00000475635 A0A1W2PPC1 479 aa15.17■□□□□ 0.02
CCDC57-208ENST00000475635 FTSJ3Q8IY81 847 aaKnown RBP15.17■□□□□ 0.02
CCDC57-208ENST00000475635 SOCS4Q8WXH5 440 aa15.17■□□□□ 0.02
CCDC57-208ENST00000475635 NUDT12Q9BQG2 462 aa15.17■□□□□ 0.02
CCDC57-208ENST00000475635 CCDC8Q9H0W5 538 aaPredicted RBP15.17■□□□□ 0.02
CCDC57-208ENST00000475635 STAP2Q9UGK3 403 aa15.17■□□□□ 0.02
CCDC57-208ENST00000475635 NOP58Q9Y2X3 529 aaKnown RBP15.17■□□□□ 0.02
CCDC57-208ENST00000475635 DNAH12Q6ZR08 3092 aa15.16■□□□□ 0.02
CCDC57-208ENST00000475635 ZNFX1Q9P2E3 1918 aaKnown RBP15.16■□□□□ 0.02
CCDC57-208ENST00000475635 IDH1O75874 414 aaKnown RBP15.16■□□□□ 0.02
CCDC57-208ENST00000475635 PRKAR2AP13861 404 aaKnown RBP15.16■□□□□ 0.02
CCDC57-208ENST00000475635 MNX1P50219 401 aaPredicted RBP15.16■□□□□ 0.02
CCDC57-208ENST00000475635 ERVK-9P63128 1117 aa15.16■□□□□ 0.02
CCDC57-208ENST00000475635 ERVK-24P63145 666 aa15.16■□□□□ 0.02
CCDC57-208ENST00000475635 Q3C1V9 767 aa15.16■□□□□ 0.02
CCDC57-208ENST00000475635 USP17L2Q6R6M4 530 aa15.16■□□□□ 0.02
CCDC57-208ENST00000475635 ITPRIPQ8IWB1 547 aa15.16■□□□□ 0.02
CCDC57-208ENST00000475635 C7orf61Q8IZ16 206 aa15.16■□□□□ 0.02
CCDC57-208ENST00000475635 MIGA1Q8NAN2 632 aa15.16■□□□□ 0.02
CCDC57-208ENST00000475635 EAF2Q96CJ1 260 aaPredicted RBP15.16■□□□□ 0.02
CCDC57-208ENST00000475635 NBPF3Q9H094 633 aa15.16■□□□□ 0.02
CCDC57-208ENST00000475635 EMILIN3Q9NT22 766 aa15.16■□□□□ 0.02
CCDC57-208ENST00000475635 RBPJLQ9UBG7 517 aa15.16■□□□□ 0.02
CCDC57-208ENST00000475635 MYH7P12883 1935 aa15.15■□□□□ 0.02
CCDC57-208ENST00000475635 BAZ2AQ9UIF9 1905 aaKnown RBP15.15■□□□□ 0.02
CCDC57-208ENST00000475635 SOX1O00570 391 aaPredicted RBP15.15■□□□□ 0.02
CCDC57-208ENST00000475635 GH2P01242 217 aa15.15■□□□□ 0.02
CCDC57-208ENST00000475635 XRCC5P13010 732 aaKnown RBP15.15■□□□□ 0.02
CCDC57-208ENST00000475635 MAPK4P31152 587 aa15.15■□□□□ 0.02
CCDC57-208ENST00000475635 USP5P45974 858 aa15.15■□□□□ 0.02
CCDC57-208ENST00000475635 PDE3AQ14432 1141 aa15.15■□□□□ 0.02
CCDC57-208ENST00000475635 MAP3K21Q5TCX8 1036 aa15.15■□□□□ 0.02
CCDC57-208ENST00000475635 GPR142Q7Z601 462 aa15.15■□□□□ 0.02
CCDC57-208ENST00000475635 CCAR1Q8IX12 1150 aaKnown RBP15.15■□□□□ 0.02
CCDC57-208ENST00000475635 MAGEB6Q8N7X4 407 aa15.15■□□□□ 0.02
CCDC57-208ENST00000475635 GTF3C2Q8WUA4 911 aaPredicted RBP15.15■□□□□ 0.02
CCDC57-208ENST00000475635 PAGR1Q9BTK6 254 aa15.15■□□□□ 0.02
CCDC57-208ENST00000475635 PORCNQ9H237 461 aa15.15■□□□□ 0.02
CCDC57-208ENST00000475635 C11orf49Q9H6J7 331 aa15.15■□□□□ 0.02
CCDC57-208ENST00000475635 OGDHLQ9ULD0 1010 aa15.15■□□□□ 0.02
CCDC57-208ENST00000475635 NDUFB9Q9Y6M9 179 aa15.15■□□□□ 0.02
CCDC57-208ENST00000475635 RLBP1P12271 317 aa15.14■□□□□ 0.01
CCDC57-208ENST00000475635 ZKSCAN1P17029 563 aaPredicted RBP15.14■□□□□ 0.01
CCDC57-208ENST00000475635 POTEEQ6S8J3 1075 aa15.14■□□□□ 0.01
CCDC57-208ENST00000475635 TRMT44Q8IYL2 757 aaKnown RBP15.14■□□□□ 0.01
CCDC57-208ENST00000475635 FEZ1Q99689 392 aa15.14■□□□□ 0.01
CCDC57-208ENST00000475635 SERPINB13Q9UIV8 391 aa15.14■□□□□ 0.01
CCDC57-208ENST00000475635 ZMYND8Q9ULU4 1186 aaPredicted RBP15.14■□□□□ 0.01
CCDC57-208ENST00000475635 RLFQ13129 1914 aa15.13■□□□□ 0.01
CCDC57-208ENST00000475635 RGS2P41220 211 aa15.13■□□□□ 0.01
CCDC57-208ENST00000475635 ZYXQ15942 572 aaKnown RBP15.13■□□□□ 0.01
CCDC57-208ENST00000475635 TATDN1Q6P1N9 297 aa15.13■□□□□ 0.01
CCDC57-208ENST00000475635 PLEKHH3Q7Z736 793 aa15.13■□□□□ 0.01
CCDC57-208ENST00000475635 CERS3Q8IU89 383 aa15.13■□□□□ 0.01
CCDC57-208ENST00000475635 USP6NLQ92738 828 aa15.13■□□□□ 0.01
CCDC57-208ENST00000475635 LRCH3Q96II8 777 aa15.13■□□□□ 0.01
CCDC57-208ENST00000475635 GDF15Q99988 308 aa15.13■□□□□ 0.01
CCDC57-208ENST00000475635 ANTXR1Q9H6X2 564 aa15.13■□□□□ 0.01
CCDC57-208ENST00000475635 PARP14Q460N5 1801 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms