RNA–Protein interactions for RNA: ENST00000475542.1

SEC23IP-206, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 552 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-206ENST00000475542 MIPEPQ99797 713 aa6.92□□□□□ -1.3
SEC23IP-206ENST00000475542 METTL5Q9NRN9 209 aaKnown RBP6.92□□□□□ -1.3
SEC23IP-206ENST00000475542 KIAA1324LA8MWY0 1029 aaPredicted RBP6.91□□□□□ -1.3
SEC23IP-206ENST00000475542 EOMESO95936 686 aa6.91□□□□□ -1.3
SEC23IP-206ENST00000475542 CST3P01034 146 aaPredicted RBP6.91□□□□□ -1.3
SEC23IP-206ENST00000475542 MSMPQ1L6U9 139 aa6.91□□□□□ -1.3
SEC23IP-206ENST00000475542 ARHGAP27Q6ZUM4 889 aa6.91□□□□□ -1.3
SEC23IP-206ENST00000475542 REC114Q7Z4M0 266 aa6.91□□□□□ -1.3
SEC23IP-206ENST00000475542 DTX1Q86Y01 620 aa6.91□□□□□ -1.3
SEC23IP-206ENST00000475542 SPON2Q9BUD6 331 aa6.91□□□□□ -1.3
SEC23IP-206ENST00000475542 BRMS1Q9HCU9 246 aa6.91□□□□□ -1.3
SEC23IP-206ENST00000475542 KCNQ5Q9NR82 932 aa6.91□□□□□ -1.3
SEC23IP-206ENST00000475542 CNTNAP4Q9C0A0 1308 aa6.91□□□□□ -1.3
SEC23IP-206ENST00000475542 LOC100996750A0A140TA64 210 aa6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 HTR3BO95264 441 aa6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 ITIH2P19823 946 aa6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 SPINK2P20155 84 aa6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 CAP2P40123 477 aa6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 RACK1P63244 317 aaKnown RBP6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 CWF19L2Q2TBE0 894 aaKnown RBP6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 SEZ6Q53EL9 994 aa6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 LETMD1Q6P1Q0 360 aa6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 FAM214BQ7L5A3 538 aa6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 MCATQ8IVS2 390 aaKnown RBP6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 MRPL41Q8IXM3 137 aaKnown RBP6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 PLD6Q8N2A8 252 aaKnown RBP6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 MFSD2AQ8NA29 543 aa6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 KRTAP4-6Q9BYQ5 205 aa6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 REV1Q9UBZ9 1251 aa6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 ADAM30Q9UKF2 790 aa6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 TPX2Q9ULW0 747 aaKnown RBP6.9□□□□□ -1.3
SEC23IP-206ENST00000475542 MCM4P33991 863 aa6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 RBM25P49756 843 aaKnown RBP6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 OXCT1P55809 520 aa6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 HDLBPQ00341 1268 aaKnown RBP6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 APOBRQ0VD83 1088 aa6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 SLC6A19Q695T7 634 aa6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 NBPF11Q86T75 865 aa6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 CDH24Q86UP0 819 aa6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 METTL16Q86W50 562 aaKnown RBP6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 KIAA0825Q8IV33 1275 aa6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 FAM13CQ8NE31 585 aa6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 EAF1Q96JC9 268 aaPredicted RBP6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 KLHL3Q9UH77 587 aa6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 DDX41Q9UJV9 622 aaKnown RBP6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 PCDHB14Q9Y5E9 798 aa6.89□□□□□ -1.31
SEC23IP-206ENST00000475542 ROBO2Q9HCK4 1378 aa6.88□□□□□ -1.31
SEC23IP-206ENST00000475542 PRR36Q9H6K5 1346 aa6.88□□□□□ -1.31
SEC23IP-206ENST00000475542 CHURC1-FNTBB4DL54 471 aa6.88□□□□□ -1.31
SEC23IP-206ENST00000475542 DNAJA2O60884 412 aa6.88□□□□□ -1.31
SEC23IP-206ENST00000475542 NETO1Q8TDF5 533 aa6.88□□□□□ -1.31
SEC23IP-206ENST00000475542 LRRC3Q9BY71 257 aa6.88□□□□□ -1.31
SEC23IP-206ENST00000475542 PRDM5Q9NQX1 630 aaPredicted RBP6.88□□□□□ -1.31
SEC23IP-206ENST00000475542 GTF2IRD1Q9UHL9 959 aa6.88□□□□□ -1.31
SEC23IP-206ENST00000475542 BNIP3Q12983 259 aa6.87□□□□□ -1.31
SEC23IP-206ENST00000475542 TMEM201Q5SNT2 666 aa6.87□□□□□ -1.31
SEC23IP-206ENST00000475542 XP32Q5T750 250 aa6.87□□□□□ -1.31
SEC23IP-206ENST00000475542 GK5Q6ZS86 529 aa6.87□□□□□ -1.31
SEC23IP-206ENST00000475542 NT5DC4Q86YG4 428 aa6.87□□□□□ -1.31
SEC23IP-206ENST00000475542 NKD1Q969G9 470 aa6.87□□□□□ -1.31
SEC23IP-206ENST00000475542 NT5C1AQ9BXI3 368 aa6.87□□□□□ -1.31
SEC23IP-206ENST00000475542 BSDC1Q9NW68 430 aaPredicted RBP6.87□□□□□ -1.31
SEC23IP-206ENST00000475542 CCDC39Q9UFE4 941 aa6.87□□□□□ -1.31
SEC23IP-206ENST00000475542 PLAGL2Q9UPG8 496 aa6.87□□□□□ -1.31
SEC23IP-206ENST00000475542 PRR33A8MZF0 331 aa6.86□□□□□ -1.31
SEC23IP-206ENST00000475542 CBX7O95931 251 aa6.86□□□□□ -1.31
SEC23IP-206ENST00000475542 WNT11O96014 354 aa6.86□□□□□ -1.31
SEC23IP-206ENST00000475542 YARSP54577 528 aaKnown RBP6.86□□□□□ -1.31
SEC23IP-206ENST00000475542 CLCQ05315 142 aa6.86□□□□□ -1.31
SEC23IP-206ENST00000475542 ANGEL1Q9UNK9 670 aaKnown RBP6.86□□□□□ -1.31
SEC23IP-206ENST00000475542 GNAT3A8MTJ3 354 aa6.85□□□□□ -1.31
SEC23IP-206ENST00000475542 IGF2BP3O00425 579 aaKnown RBP eCLIP6.85□□□□□ -1.31
SEC23IP-206ENST00000475542 CEACAM5P06731 702 aa6.85□□□□□ -1.31
SEC23IP-206ENST00000475542 CD96P40200 585 aa6.85□□□□□ -1.31
SEC23IP-206ENST00000475542 IFI16Q16666 785 aaKnown RBP6.85□□□□□ -1.31
SEC23IP-206ENST00000475542 SFRP5Q5T4F7 317 aa6.85□□□□□ -1.31
SEC23IP-206ENST00000475542 ZNF574Q6ZN55 896 aaPredicted RBP6.85□□□□□ -1.31
SEC23IP-206ENST00000475542 GP2P55259 537 aaKnown RBP6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 NKPD1Q17RQ9 610 aa6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 NFXL1Q6ZNB6 911 aa6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 SPRED2Q7Z698 418 aa6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 SLITRK4Q8IW52 837 aa6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 PHACTR4Q8IZ21 702 aa6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 ZNF654Q8IZM8 581 aa6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 BAHD1Q8TBE0 780 aaPredicted RBP6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 PPP1R13LQ8WUF5 828 aa6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 CYB5D2Q8WUJ1 264 aa6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 KIF2CQ99661 725 aa6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 ANTXR1Q9H6X2 564 aa6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 MKNK2Q9HBH9 465 aa6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 CEP131Q9UPN4 1083 aa6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 MAPK8IP1Q9UQF2 711 aa6.84□□□□□ -1.31
SEC23IP-206ENST00000475542 SLC22A31A6NKX4 558 aa6.83□□□□□ -1.32
SEC23IP-206ENST00000475542 ATE1O95260 518 aa6.83□□□□□ -1.32
SEC23IP-206ENST00000475542 PRNPP04156 253 aa6.83□□□□□ -1.32
SEC23IP-206ENST00000475542 TNNI2P48788 182 aa6.83□□□□□ -1.32
SEC23IP-206ENST00000475542 ZNF165P49910 485 aa6.83□□□□□ -1.32
SEC23IP-206ENST00000475542 PAK2Q13177 524 aa6.83□□□□□ -1.32
SEC23IP-206ENST00000475542 AOC3Q16853 763 aa6.83□□□□□ -1.32
SEC23IP-206ENST00000475542 ARSHQ5FYA8 562 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms