RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 CACNB2Q08289 660 aaPredicted RBP19.62■□□□□ 0.73
ITGB1-211ENST00000475184 SLFN5Q08AF3 891 aa19.62■□□□□ 0.73
ITGB1-211ENST00000475184 NEUROD6Q96NK8 337 aa19.62■□□□□ 0.73
ITGB1-211ENST00000475184 LRRC26Q2I0M4 334 aa19.61■□□□□ 0.73
ITGB1-211ENST00000475184 SH3RF3Q8TEJ3 882 aaPredicted RBP19.61■□□□□ 0.73
ITGB1-211ENST00000475184 DHX36Q9H2U1 1008 aaKnown RBP19.61■□□□□ 0.73
ITGB1-211ENST00000475184 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.61■□□□□ 0.73
ITGB1-211ENST00000475184 MYH1P12882 1939 aa19.61■□□□□ 0.73
ITGB1-211ENST00000475184 SRGAP3O43295 1099 aa19.6■□□□□ 0.73
ITGB1-211ENST00000475184 ARID4AP29374 1257 aaPredicted RBP19.6■□□□□ 0.73
ITGB1-211ENST00000475184 CCND3P30281 292 aaPredicted RBP19.6■□□□□ 0.73
ITGB1-211ENST00000475184 RGS2P41220 211 aa19.6■□□□□ 0.73
ITGB1-211ENST00000475184 ERVK-9P63128 1117 aa19.6■□□□□ 0.73
ITGB1-211ENST00000475184 ERVK-24P63145 666 aa19.6■□□□□ 0.73
ITGB1-211ENST00000475184 MDM2Q00987 491 aaPredicted RBP19.6■□□□□ 0.73
ITGB1-211ENST00000475184 GORABQ5T7V8 394 aa19.6■□□□□ 0.73
ITGB1-211ENST00000475184 LHX8Q68G74 356 aa19.6■□□□□ 0.73
ITGB1-211ENST00000475184 CCAR1Q8IX12 1150 aaKnown RBP19.6■□□□□ 0.73
ITGB1-211ENST00000475184 USP6NLQ92738 828 aa19.6■□□□□ 0.73
ITGB1-211ENST00000475184 NOL10Q9BSC4 688 aaKnown RBP19.6■□□□□ 0.73
ITGB1-211ENST00000475184 API5Q9BZZ5 524 aaKnown RBP19.6■□□□□ 0.73
ITGB1-211ENST00000475184 RBPJLQ9UBG7 517 aa19.6■□□□□ 0.73
ITGB1-211ENST00000475184 NOB1Q9ULX3 412 aaKnown RBP19.6■□□□□ 0.73
ITGB1-211ENST00000475184 C19orf81C9J6K1 198 aa19.59■□□□□ 0.73
ITGB1-211ENST00000475184 USP17L10C9JJH3 530 aa19.59■□□□□ 0.73
ITGB1-211ENST00000475184 JAG1P78504 1218 aa19.59■□□□□ 0.73
ITGB1-211ENST00000475184 CCL14Q16627 93 aa19.59■□□□□ 0.73
ITGB1-211ENST00000475184 MORN1Q5T089 497 aa19.59■□□□□ 0.73
ITGB1-211ENST00000475184 GPR142Q7Z601 462 aa19.59■□□□□ 0.73
ITGB1-211ENST00000475184 APBA2Q99767 749 aa19.59■□□□□ 0.73
ITGB1-211ENST00000475184 COL25A1Q9BXS0 654 aaPredicted RBP19.59■□□□□ 0.73
ITGB1-211ENST00000475184 PORCNQ9H237 461 aa19.59■□□□□ 0.73
ITGB1-211ENST00000475184 LRP2BPQ9P2M1 347 aa19.59■□□□□ 0.73
ITGB1-211ENST00000475184 LTBP2Q14767 1821 aa19.59■□□□□ 0.73
ITGB1-211ENST00000475184 TTC28Q96AY4 2481 aa19.59■□□□□ 0.73
ITGB1-211ENST00000475184 GTF3C2Q8WUA4 911 aaPredicted RBP19.58■□□□□ 0.72
ITGB1-211ENST00000475184 PAGR1Q9BTK6 254 aa19.58■□□□□ 0.72
ITGB1-211ENST00000475184 DNAJC18Q9H819 358 aa19.58■□□□□ 0.72
ITGB1-211ENST00000475184 MCAMP43121 646 aa19.57■□□□□ 0.72
ITGB1-211ENST00000475184 MTX1Q13505 466 aa19.57■□□□□ 0.72
ITGB1-211ENST00000475184 SHROOM1Q2M3G4 852 aaPredicted RBP19.57■□□□□ 0.72
ITGB1-211ENST00000475184 Q3C1V9 767 aa19.57■□□□□ 0.72
ITGB1-211ENST00000475184 PLEKHH3Q7Z736 793 aa19.57■□□□□ 0.72
ITGB1-211ENST00000475184 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.57■□□□□ 0.72
ITGB1-211ENST00000475184 CRACR2BQ8N4Y2 399 aaPredicted RBP19.57■□□□□ 0.72
ITGB1-211ENST00000475184 TRIM34Q9BYJ4 488 aa19.57■□□□□ 0.72
ITGB1-211ENST00000475184 GINM1Q9NU53 330 aa19.57■□□□□ 0.72
ITGB1-211ENST00000475184 AATFQ9NY61 560 aaKnown RBP eCLIP19.57■□□□□ 0.722e-7■□□□□ 10.9
ITGB1-211ENST00000475184 ZBTB21Q9ULJ3 1066 aa19.57■□□□□ 0.72
ITGB1-211ENST00000475184 RLFQ13129 1914 aa19.57■□□□□ 0.72
ITGB1-211ENST00000475184 POTEB2H3BUK9 544 aa19.56■□□□□ 0.72
ITGB1-211ENST00000475184 GDF11O95390 407 aa19.56■□□□□ 0.72
ITGB1-211ENST00000475184 BAG3O95817 575 aa19.56■□□□□ 0.72
ITGB1-211ENST00000475184 PLCG2P16885 1265 aa19.56■□□□□ 0.72
ITGB1-211ENST00000475184 FAM109BQ6ICB4 259 aaPredicted RBP19.56■□□□□ 0.72
ITGB1-211ENST00000475184 METTL16Q86W50 562 aaKnown RBP19.56■□□□□ 0.72
ITGB1-211ENST00000475184 MAPKAPK5Q8IW41 473 aa19.56■□□□□ 0.72
ITGB1-211ENST00000475184 CDCA7LQ96GN5 454 aa19.56■□□□□ 0.72
ITGB1-211ENST00000475184 GUCD1Q96NT3 240 aa19.56■□□□□ 0.72
ITGB1-211ENST00000475184 CDH23Q9H251 3354 aa19.55■□□□□ 0.72
ITGB1-211ENST00000475184 FLT1P17948 1338 aa19.55■□□□□ 0.72
ITGB1-211ENST00000475184 GNAI3P08754 354 aa19.55■□□□□ 0.72
ITGB1-211ENST00000475184 UQCRFS1P1P0C7P4 283 aa19.55■□□□□ 0.72
ITGB1-211ENST00000475184 NAA16Q6N069 864 aaPredicted RBP19.55■□□□□ 0.72
ITGB1-211ENST00000475184 POTEEQ6S8J3 1075 aa19.55■□□□□ 0.72
ITGB1-211ENST00000475184 FOXP4Q8IVH2 680 aaPredicted RBP19.55■□□□□ 0.72
ITGB1-211ENST00000475184 TGFBRAP1Q8WUH2 860 aa19.55■□□□□ 0.72
ITGB1-211ENST00000475184 LBHD1Q9BQE6 289 aaPredicted RBP19.55■□□□□ 0.72
ITGB1-211ENST00000475184 CWC22Q9HCG8 908 aaKnown RBP19.55■□□□□ 0.72
ITGB1-211ENST00000475184 CT47B1P0C2W7 299 aaPredicted RBP19.54■□□□□ 0.72
ITGB1-211ENST00000475184 MAP2K5Q13163 448 aa19.54■□□□□ 0.72
ITGB1-211ENST00000475184 EMILIN3Q9NT22 766 aa19.54■□□□□ 0.72
ITGB1-211ENST00000475184 PALD1Q9ULE6 856 aa19.54■□□□□ 0.72
ITGB1-211ENST00000475184 SPTBN5Q9NRC6 3674 aaKnown RBP19.54■□□□□ 0.72
ITGB1-211ENST00000475184 PPP4CP60510 307 aa19.53■□□□□ 0.72
ITGB1-211ENST00000475184 MFSD14CQ5VZR4 134 aa19.53■□□□□ 0.72
ITGB1-211ENST00000475184 USP17L2Q6R6M4 530 aa19.53■□□□□ 0.72
ITGB1-211ENST00000475184 FAM161BQ96MY7 647 aa19.53■□□□□ 0.72
ITGB1-211ENST00000475184 SENP6Q9GZR1 1112 aaPredicted RBP19.53■□□□□ 0.72
ITGB1-211ENST00000475184 RABGAP1Q9Y3P9 1069 aa19.53■□□□□ 0.72
ITGB1-211ENST00000475184 GLRX3O76003 335 aaKnown RBP19.52■□□□□ 0.72
ITGB1-211ENST00000475184 CCNA1P78396 465 aa19.52■□□□□ 0.72
ITGB1-211ENST00000475184 ADGRA1Q86SQ6 560 aa19.52■□□□□ 0.72
ITGB1-211ENST00000475184 TRMT2AQ8IZ69 625 aaKnown RBP19.52■□□□□ 0.72
ITGB1-211ENST00000475184 EDC3Q96F86 508 aaKnown RBP19.52■□□□□ 0.72
ITGB1-211ENST00000475184 SNRKQ9NRH2 765 aa19.52■□□□□ 0.72
ITGB1-211ENST00000475184 HLA-DOAP06340 250 aa19.51■□□□□ 0.71
ITGB1-211ENST00000475184 FLRT1Q9NZU1 646 aa19.51■□□□□ 0.71
ITGB1-211ENST00000475184 DDX20Q9UHI6 824 aaKnown RBP19.51■□□□□ 0.71
ITGB1-211ENST00000475184 SAP30BPQ9UHR5 308 aaKnown RBP19.51■□□□□ 0.71
ITGB1-211ENST00000475184 NDUFB9Q9Y6M9 179 aa19.51■□□□□ 0.71
ITGB1-211ENST00000475184 MSCO60682 206 aa19.5■□□□□ 0.71
ITGB1-211ENST00000475184 CNMDO75829 334 aa19.5■□□□□ 0.71
ITGB1-211ENST00000475184 GH2P01242 217 aa19.5■□□□□ 0.71
ITGB1-211ENST00000475184 ATN1P54259 1190 aaPredicted RBP19.5■□□□□ 0.71
ITGB1-211ENST00000475184 G3BP1Q13283 466 aaKnown RBP eCLIP19.5■□□□□ 0.71
ITGB1-211ENST00000475184 ZNF697Q5TEC3 545 aa19.5■□□□□ 0.71
ITGB1-211ENST00000475184 WDR78Q5VTH9 848 aa19.5■□□□□ 0.71
ITGB1-211ENST00000475184 ATF7IPQ6VMQ6 1270 aa19.5■□□□□ 0.71
ITGB1-211ENST00000475184 LPAR1Q92633 364 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms