RNA–Protein interactions for RNA: ENST00000474933.6

TRO-220, Transcript of trophinin, humanhuman

TSL 4

Gene TRO, Length 299 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-220ENST00000474933 DICER1Q9UPY3 1922 aaKnown RBP13.74□□□□□ -0.21
TRO-220ENST00000474933 CNTNAP1P78357 1384 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 NID2Q14112 1375 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 LMOD1P29536 600 aaPredicted RBP13.73□□□□□ -0.21
TRO-220ENST00000474933 PDIA3P30101 505 aaKnown RBP13.73□□□□□ -0.21
TRO-220ENST00000474933 TFAP4Q01664 338 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 ST3GAL1Q11201 340 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 STK3Q13188 491 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 SEC23AQ15436 765 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 FAM47AQ5JRC9 791 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 APOA5Q6Q788 366 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 SYNE3Q6ZMZ3 975 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 SH3BP5LQ7L8J4 393 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 ZFPM1Q8IX07 1006 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 ENAHQ8N8S7 591 aaPredicted RBP13.73□□□□□ -0.21
TRO-220ENST00000474933 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 ZKSCAN3Q9BRR0 538 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 TCP11L1Q9NUJ3 509 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 BRPF3Q9ULD4 1205 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 SMC3Q9UQE7 1217 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 SLC12A7Q9Y666 1083 aa13.73□□□□□ -0.21
TRO-220ENST00000474933 DDTLA6NHG4 134 aaPredicted RBP13.72□□□□□ -0.21
TRO-220ENST00000474933 DHX16O60231 1041 aaKnown RBP13.72□□□□□ -0.21
TRO-220ENST00000474933 NBPF9Q3BBW0 867 aa13.72□□□□□ -0.21
TRO-220ENST00000474933 TBC1D10BQ4KMP7 808 aaPredicted RBP13.72□□□□□ -0.21
TRO-220ENST00000474933 IFIT1BQ5T764 474 aaKnown RBP13.72□□□□□ -0.21
TRO-220ENST00000474933 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
TRO-220ENST00000474933 FOXP4Q8IVH2 680 aaPredicted RBP13.72□□□□□ -0.21
TRO-220ENST00000474933 NEDD1Q8NHV4 660 aa13.72□□□□□ -0.21
TRO-220ENST00000474933 CCDC17Q96LX7 622 aa13.72□□□□□ -0.21
TRO-220ENST00000474933 CSRNP1Q96S65 589 aa13.72□□□□□ -0.21
TRO-220ENST00000474933 LLPHQ9BRT6 129 aaKnown RBP13.72□□□□□ -0.21
TRO-220ENST00000474933 MYH1P12882 1939 aa13.71□□□□□ -0.21
TRO-220ENST00000474933 GOLGA8AA7E2F4 631 aa13.71□□□□□ -0.21
TRO-220ENST00000474933 ZBTB43O43298 467 aa13.71□□□□□ -0.21
TRO-220ENST00000474933 DDAH1O94760 285 aa13.71□□□□□ -0.21
TRO-220ENST00000474933 SHMT1P34896 483 aa13.71□□□□□ -0.21
TRO-220ENST00000474933 METAP2P50579 478 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRO-220ENST00000474933 SCRN1Q12765 414 aa13.71□□□□□ -0.21
TRO-220ENST00000474933 PPP4R3BQ5MIZ7 849 aa13.71□□□□□ -0.21
TRO-220ENST00000474933 DPY19L2Q6NUT2 758 aa13.71□□□□□ -0.21
TRO-220ENST00000474933 SAMD7Q7Z3H4 446 aa13.71□□□□□ -0.21
TRO-220ENST00000474933 METTL16Q86W50 562 aaKnown RBP13.71□□□□□ -0.21
TRO-220ENST00000474933 DGKHQ86XP1 1220 aa13.71□□□□□ -0.21
TRO-220ENST00000474933 SENP2Q9HC62 589 aa13.71□□□□□ -0.21
TRO-220ENST00000474933 HERC5Q9UII4 1024 aaKnown RBP13.71□□□□□ -0.21
TRO-220ENST00000474933 HPS5Q9UPZ3 1129 aa13.71□□□□□ -0.21
TRO-220ENST00000474933 DDNO94850 711 aaPredicted RBP13.7□□□□□ -0.22
TRO-220ENST00000474933 EGFRP00533 1210 aa13.7□□□□□ -0.22
TRO-220ENST00000474933 CALM1P0DP23 149 aa13.7□□□□□ -0.22
TRO-220ENST00000474933 CALM2P0DP24 149 aa13.7□□□□□ -0.22
TRO-220ENST00000474933 CALM3P0DP25 149 aa13.7□□□□□ -0.22
TRO-220ENST00000474933 CPLX2Q6PUV4 134 aaKnown RBP13.7□□□□□ -0.22
TRO-220ENST00000474933 CATIPQ7Z7H3 387 aa13.7□□□□□ -0.22
TRO-220ENST00000474933 MICU3Q86XE3 530 aa13.7□□□□□ -0.22
TRO-220ENST00000474933 APOBEC3FQ8IUX4 373 aaKnown RBP13.7□□□□□ -0.22
TRO-220ENST00000474933 ZNF654Q8IZM8 581 aa13.7□□□□□ -0.22
TRO-220ENST00000474933 TRPM4Q8TD43 1214 aa13.7□□□□□ -0.22
TRO-220ENST00000474933 ANKS1AQ92625 1134 aa13.7□□□□□ -0.22
TRO-220ENST00000474933 L3MBTL3Q96JM7 780 aaPredicted RBP13.7□□□□□ -0.22
TRO-220ENST00000474933 DNAJC18Q9H819 358 aa13.7□□□□□ -0.22
TRO-220ENST00000474933 KAT14Q9H8E8 782 aa13.7□□□□□ -0.22
TRO-220ENST00000474933 KIF3AQ9Y496 699 aa13.7□□□□□ -0.22
TRO-220ENST00000474933 SBF1O95248 1867 aa13.7□□□□□ -0.22
TRO-220ENST00000474933 CCDC196A0A1B0GTZ2 297 aa13.69□□□□□ -0.22
TRO-220ENST00000474933 CPLX1O14810 134 aa13.69□□□□□ -0.22
TRO-220ENST00000474933 NMT2O60551 498 aa13.69□□□□□ -0.22
TRO-220ENST00000474933 CDKL5O76039 1030 aa13.69□□□□□ -0.22
TRO-220ENST00000474933 EPS15P42566 896 aa13.69□□□□□ -0.22
TRO-220ENST00000474933 CCT2P78371 535 aaKnown RBP13.69□□□□□ -0.22
TRO-220ENST00000474933 NUCB2P80303 420 aa13.69□□□□□ -0.22
TRO-220ENST00000474933 HMGN5P82970 282 aaKnown RBP13.69□□□□□ -0.22
TRO-220ENST00000474933 PPP2R5BQ15173 497 aa13.69□□□□□ -0.22
TRO-220ENST00000474933 NCOA5Q9HCD5 579 aaKnown RBP13.69□□□□□ -0.22
TRO-220ENST00000474933 ADARB2Q9NS39 739 aaKnown RBP13.69□□□□□ -0.22
TRO-220ENST00000474933 HACL1Q9UJ83 578 aa13.69□□□□□ -0.22
TRO-220ENST00000474933 PTPDC1A2A3K4 754 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 PDIA4P13667 645 aaKnown RBP13.68□□□□□ -0.22
TRO-220ENST00000474933 AKR1B1P15121 316 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 PDCP20941 246 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 GJB2P29033 226 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 RASA3Q14644 834 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 RTN1Q16799 776 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 RCSD1Q6JBY9 416 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 TATDN1Q6P1N9 297 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 NSUN7Q8NE18 718 aaKnown RBP13.68□□□□□ -0.22
TRO-220ENST00000474933 SMARCC2Q8TAQ2 1214 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 MYL10Q9BUA6 226 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 TMEM39BQ9GZU3 492 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 IL17RBQ9NRM6 502 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 GGA3Q9NZ52 723 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 PPP2R3BQ9Y5P8 575 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 SIPA1L1O43166 1804 aa13.68□□□□□ -0.22
TRO-220ENST00000474933 PITPNM2Q9BZ72 1349 aa13.67□□□□□ -0.22
TRO-220ENST00000474933 IGKV6D-41A0A0C4DH26 115 aa13.67□□□□□ -0.22
TRO-220ENST00000474933 MPHOSPH10O00566 681 aaKnown RBP13.67□□□□□ -0.22
TRO-220ENST00000474933 TBC1D12O60347 775 aa13.67□□□□□ -0.22
TRO-220ENST00000474933 RXRAP19793 462 aa13.67□□□□□ -0.22
TRO-220ENST00000474933 NOVP48745 357 aa13.67□□□□□ -0.22
TRO-220ENST00000474933 CERKLQ49MI3 558 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms