RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ADAM7Q9H2U9 754 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 ARFGAP3Q9NP61 516 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 CWC15Q9P013 229 aaKnown RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 TBC1D2BQ9UPU7 963 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 SOS2Q07890 1332 aaPredicted RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 MROH7Q68CQ1 1323 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 ZBTB7CA1YPR0 619 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 WASLO00401 505 aaPredicted RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 JAK2O60674 1132 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 PPP1R37O75864 691 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 ATP6V1AP38606 617 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 ABL2P42684 1182 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 HERVK_113P62684 666 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 ZNF268Q14587 947 aaPredicted RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 SLC39A14Q15043 492 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 E2F4Q16254 413 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 SGSM1Q2NKQ1 1148 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 KIF4BQ2VIQ3 1234 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 CWC27Q6UX04 472 aaKnown RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 LEKR1Q6ZMV7 388 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 CCDC26Q8TAB7 109 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 CHMP7Q8WUX9 453 aaPredicted RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 CENPTQ96BT3 561 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 BAG1Q99933 345 aaPredicted RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 SLC5A4Q9NY91 659 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 FAM169AQ9Y6X4 670 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 UBN2Q6ZU65 1347 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 ERICH4A6NGS2 130 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 PDE2AO00408 941 aaPredicted RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 DNM1LO00429 736 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 CES2O00748 559 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 PJA2O43164 708 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 FIBPO43427 364 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 HMMRO75330 724 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 GLRX3O76003 335 aaKnown RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 LINGO3P0C6S8 592 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 INHBCP55103 352 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 ANTXR2P58335 489 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 SART3Q15020 963 aaKnown RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 MB21D2Q8IYB1 491 aaPredicted RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 MPNDQ8N594 471 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 TRIML1Q8N9V2 468 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 IL17REQ8NFR9 667 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 CTCFLQ8NI51 663 aaPredicted RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 ZNF317Q96PQ6 595 aaPredicted RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 DSCC1Q9BVC3 393 aa4.7□□□□□ -1.66
USP16-205ENST00000474835 FTOQ9C0B1 505 aaKnown RBP eCLIP4.7□□□□□ -1.66
USP16-205ENST00000474835 BICC1Q9H694 974 aaKnown RBP4.7□□□□□ -1.66
USP16-205ENST00000474835 COL4A4P53420 1690 aaPredicted RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 EME2A4GXA9 379 aaPredicted RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 F8W031 263 aaPredicted RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 MEFVO15553 781 aaPredicted RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 CYP21A2P08686 494 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 CCNHP51946 323 aaPredicted RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 POU5F1Q01860 360 aaKnown RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 SEMA3FQ13275 785 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 PLS1Q14651 629 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 NPY5RQ15761 445 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 MTHFSDQ2M296 383 aaKnown RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 MIS18BP1Q6P0N0 1132 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 MTHFD1LQ6UB35 978 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 PIGWQ7Z7B1 504 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 CKAP2LQ8IYA6 745 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 STK11IPQ8N1F8 1099 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 AOPEPQ8N6M6 819 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 IGSF22Q8N9C0 903 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 TCP11Q8WWU5 503 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 TLCD1Q96CP7 247 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 CCDC51Q96ER9 411 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 ANKRD27Q96NW4 1050 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 NUTM2FA1L443 756 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 A6NNZ2 444 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 PPP1R3GB7ZBB8 358 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 MFAP3LO75121 409 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 RNF40O75150 1001 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 WFS1O76024 890 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 SCP2P22307 547 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 CD151P48509 253 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 TOB1P50616 345 aaPredicted RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 PPFIA1Q13136 1202 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 CBLBQ13191 982 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 TUBB8Q3ZCM7 444 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 ZSCAN29Q8IWY8 852 aaPredicted RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 SPATA32Q96LK8 384 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 ZNF570Q96NI8 536 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 NEUROD6Q96NK8 337 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 FAM107BQ9H098 131 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.69□□□□□ -1.66
USP16-205ENST00000474835 KIAA1522Q9P206 1035 aaPredicted RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 CTNNAL1Q9UBT7 734 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 CORO1CQ9ULV4 474 aaPredicted RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 SMC3Q9UQE7 1217 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 MAP3K13O43283 966 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 ERCC5P28715 1186 aaPredicted RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 PDIA3P30101 505 aaKnown RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 EIF4A1P60842 406 aaKnown RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 KIF23Q02241 960 aaPredicted RBP4.69□□□□□ -1.66
USP16-205ENST00000474835 DPYDQ12882 1025 aa4.69□□□□□ -1.66
USP16-205ENST00000474835 ZC3H3Q8IXZ2 948 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms